Difference between revisions of "NONHSAT131890"

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sequence = <dnaseq>atttaatgggaagcagatgtctcacagacacctcaagctcaacgtccTGTTCCCACCCTCTCACTTTCTATTGAAACTGTCTCTGCTGTCTGTACTCCCTTCCTTGTTCTTTTGCACCTGGACTAGACAGAAGACTACAGTTCAATAAGAAGGAAACACATTCATTTTCAGTATTGTTAATAAAGAAGCTTACCTAAAAGAAGGAAATCAAAACAAGTATAGAGAGAGCTACCAATAGGAGcaaaaaaaacaaacaaaaacaacaacaacaacaaaaataaaaCAaaaaaaccgttttcacgaggaactttgaggatacaatcatctctgcttgggagccACTGCCACAGAATACAAAAGAAATGAACATGAAGAGGTTTGCATTTTTCTTGCTGCACATTAGGCTATTAAACATCCTGCACACGTTCTGTGGCTTCTTTCAGATAATCTACACTGCAACTAGGGGAGGCTATTGAATGTGATGGTCCCCTCAGATGCCTAGAGGAAGATGAACAATGGTAATCAGATATCCTAAAGTTATCTTTAGGGCACTGGCAAAATAGCAGCAATGCCTGGTGGAAGCTGACTTTGTGCATACACATGAGAGCCCACAGAAAACTTCAAACTTCATGGGAAATAAAACCTTCAGCTGCAGCTAAGAATTTGGAGGTTACTGAAGGAGGTTACTTTTTCAAGAGCAGAAGTAAGGATTCCACTGAATTTGCTCACCAAAGATAAGTCAGCAAAGAAAACTTACTGAAGAATACAGGAGcctgtgaggtgagtaacattattatgtgatttaacaaatgaggaaactaaagtccttaaaaatggtggcttTTGTTGACATATGTTGTTTTGAATGCTTTCCTTCCTGTTCCCCATGATTTGGCAGGAGTTCCTTGGGAAACGACTCCTCCACTGAATGCAATCAAGTTAAAACTATCAAGCCATATACTTTTCTGCCTTCTACAAGAATAAATGATGGTCAAATGTTCTTTCTTTCAGGAACATAAATCTTAAGCAGGCTTACATAAGGAAGGGAAGTGGTTGAATCTGAGGTAATTCCATGGTGGACTTTGAAGAAAGCCTTCCATGAGTTCCCAGTCCATATCCTCCAAAAGGTTTCTTGGATATGCTTTATTTATGCCTAATTTTCCAGTTTTCTCTTTAATATTGTGTGCTCTAATATTTTATTCTCTCTCTTTTTTTTGCTTCACTTAGTTAGAATTTCTTTCAGCCAATGAAGAATTCTATTGAGAAGCATGAATCTGTAATTTTGCATATTCCAGAATAGTTATGATCTAAACATTACATCCTGCTGTATCCCTAAGTACTTGATGCAGTTAAGAAGTATGACATAATTATGTCCATTTACCCATGTATAGTTATCAAGTAATAATTATTGTTTTCCCCTGCCTATTCTAGAAAAGATTTTAAGTAGCTGTGTTTTTAAATTTAGTAATTTTTAACTTGAATCTCCACTGTTCTCAGACAGCATATCAGCTCCTGCTTTCCAGACAAACTTCCTGGGTCTTGGGAAGAAGAAAGCCTCAgactaagaactctctctggactcagacagcctgaattcaaatcccatctctattcttactagtcatatgaacacagGATAGTGAAGAATGAAAGAGAAGCAAAACAGATCCTGCAGGTTGTGCTCACCACGGTGAAAATCATTATTTGCAACTCCCACAGGAGAACCATATCCATTCAGCTCACTTTGGACCACCTGTGGAGCCTGATAACCAGGGAACAGAGAACCTGTTGAGATCCAAATTTGTGTGCCAGGATCACAAACTCATCTGAAGCAGATGCCACGTGTTACACTGTTATGTCTCTCAGAGACTCCAGCACTTTGAAAGTATTAGGCCTTGCTTATTGAGATGAATATTTTTTTCTAGGCATGTCCCAAAGTTCTCAGCATAGCTACAACCCTGATTTTCACAGGATTTTCATTAAAATTAGGTTCTAGAGCATTACTTCCCTAATGTGCAATGCAACTTACGTTTAGTTTTCAAATCAAAATTAGTTTTGTTTTTCCACTGTCTTTGTCTTTGAAAATATTGAACTTGGGATTTCCAAAATTATAATTAGCAATTATTTTTACATATCTTTTATATACATAACTTTTACAATGGCTGCCATTATCATGTAGGTTCTTAGGAAGTGTTTCTGATCCTTGTAAATAAAAGTGAAAGAAGAAATCTTTACTGCTTGCTGACCCATGTGACTAACCTTGAAATCAGAGAGGCAGATTCATTTAAAACAAACTTGCAAACTGTTAAGCAAAGTACTGAATCTCTGTGACTTGACCAAAAGTAATTCAGACTTGACTATTCCAGGCTCCCTTCTATCTCTGTAGCAACCCATGCATCATAGACTCCAGTTGCAATGGATGGTCAAGGAATCTGCTGTGCCTTTTGAGTCTCTCCATTTTATATTGCCAAATTTATCTTCCTTTAATACTTCACTTCACATAAGACACTAAGATAAACAAGGATGCAACTCACTTATATTTcaaaatagtacctagtggttaaaagtacttgttctgaaagcaactctatttttctagttctaacatgtctccaactagttatctcaccttgagcttggcacataatcactccatcttacttttgcatctgtgacacaagaaaaataccacccacctcaacatagatcttatgaagattaaaataagattatgaaagtaaaatgctcagcacaatgtctaaacgaaaataaatgctcagcaagtaggagctactataattATTATCcagatcaaatattttctcctctatgaagctttcttattcttccccagctggaattacttattttcttccttgctttctacaccacactttagtcaccaccatgctggcacttgtctcaccgcattataattatttatgtgcctgtgttccataaccagaatatgggACTTAAGCTTCTTTATACCTCCAGCATAATTGTTTCATGTGTGCTTTTAGGTAATGGAGTAAAATGGATGAATGAGTGAATGCGACTATAGTACTAAATGCTCTTAGATAAAGATGTAATTATTCTTAAGTGATAAAATTATTCGAACATGAGTAGTTCAGATAATGAGAGACTGTCATAGAATTACTTGATAAAATCTAGTCAATAAAATGGCTTGGCAATATAACCTTTATGATTTCTTTAAACAATCATTCATTTCTTTCTGAAGATGAGAAGAGGAGATTCCTTCTCCCATCTTTATATTTCAACAATGATTAGAAAACAAATTGATCTCTGGGATCAGTGCCCAATACCATTAAAGTGGTATACATCTTACAATTCTTAATTAATTTGTGGCATACATATACcagtctccacagccagcttcatctgcatacagcagcataatcacttttttccttatagtaaagacatattatgagtcatcaaagtcttctccgggggttgtggttatcatctggtaatcacacccttgggaggttaaaaacacttatctttggatcatgacttgcaatgccccaggggtgtgattatctcaggcaactcacactttctgtcatgcctaattgcttaattattatagctgcaagttcacaccaccatacaggaactca</dnaseq>|
 
sequence = <dnaseq>atttaatgggaagcagatgtctcacagacacctcaagctcaacgtccTGTTCCCACCCTCTCACTTTCTATTGAAACTGTCTCTGCTGTCTGTACTCCCTTCCTTGTTCTTTTGCACCTGGACTAGACAGAAGACTACAGTTCAATAAGAAGGAAACACATTCATTTTCAGTATTGTTAATAAAGAAGCTTACCTAAAAGAAGGAAATCAAAACAAGTATAGAGAGAGCTACCAATAGGAGcaaaaaaaacaaacaaaaacaacaacaacaacaaaaataaaaCAaaaaaaccgttttcacgaggaactttgaggatacaatcatctctgcttgggagccACTGCCACAGAATACAAAAGAAATGAACATGAAGAGGTTTGCATTTTTCTTGCTGCACATTAGGCTATTAAACATCCTGCACACGTTCTGTGGCTTCTTTCAGATAATCTACACTGCAACTAGGGGAGGCTATTGAATGTGATGGTCCCCTCAGATGCCTAGAGGAAGATGAACAATGGTAATCAGATATCCTAAAGTTATCTTTAGGGCACTGGCAAAATAGCAGCAATGCCTGGTGGAAGCTGACTTTGTGCATACACATGAGAGCCCACAGAAAACTTCAAACTTCATGGGAAATAAAACCTTCAGCTGCAGCTAAGAATTTGGAGGTTACTGAAGGAGGTTACTTTTTCAAGAGCAGAAGTAAGGATTCCACTGAATTTGCTCACCAAAGATAAGTCAGCAAAGAAAACTTACTGAAGAATACAGGAGcctgtgaggtgagtaacattattatgtgatttaacaaatgaggaaactaaagtccttaaaaatggtggcttTTGTTGACATATGTTGTTTTGAATGCTTTCCTTCCTGTTCCCCATGATTTGGCAGGAGTTCCTTGGGAAACGACTCCTCCACTGAATGCAATCAAGTTAAAACTATCAAGCCATATACTTTTCTGCCTTCTACAAGAATAAATGATGGTCAAATGTTCTTTCTTTCAGGAACATAAATCTTAAGCAGGCTTACATAAGGAAGGGAAGTGGTTGAATCTGAGGTAATTCCATGGTGGACTTTGAAGAAAGCCTTCCATGAGTTCCCAGTCCATATCCTCCAAAAGGTTTCTTGGATATGCTTTATTTATGCCTAATTTTCCAGTTTTCTCTTTAATATTGTGTGCTCTAATATTTTATTCTCTCTCTTTTTTTTGCTTCACTTAGTTAGAATTTCTTTCAGCCAATGAAGAATTCTATTGAGAAGCATGAATCTGTAATTTTGCATATTCCAGAATAGTTATGATCTAAACATTACATCCTGCTGTATCCCTAAGTACTTGATGCAGTTAAGAAGTATGACATAATTATGTCCATTTACCCATGTATAGTTATCAAGTAATAATTATTGTTTTCCCCTGCCTATTCTAGAAAAGATTTTAAGTAGCTGTGTTTTTAAATTTAGTAATTTTTAACTTGAATCTCCACTGTTCTCAGACAGCATATCAGCTCCTGCTTTCCAGACAAACTTCCTGGGTCTTGGGAAGAAGAAAGCCTCAgactaagaactctctctggactcagacagcctgaattcaaatcccatctctattcttactagtcatatgaacacagGATAGTGAAGAATGAAAGAGAAGCAAAACAGATCCTGCAGGTTGTGCTCACCACGGTGAAAATCATTATTTGCAACTCCCACAGGAGAACCATATCCATTCAGCTCACTTTGGACCACCTGTGGAGCCTGATAACCAGGGAACAGAGAACCTGTTGAGATCCAAATTTGTGTGCCAGGATCACAAACTCATCTGAAGCAGATGCCACGTGTTACACTGTTATGTCTCTCAGAGACTCCAGCACTTTGAAAGTATTAGGCCTTGCTTATTGAGATGAATATTTTTTTCTAGGCATGTCCCAAAGTTCTCAGCATAGCTACAACCCTGATTTTCACAGGATTTTCATTAAAATTAGGTTCTAGAGCATTACTTCCCTAATGTGCAATGCAACTTACGTTTAGTTTTCAAATCAAAATTAGTTTTGTTTTTCCACTGTCTTTGTCTTTGAAAATATTGAACTTGGGATTTCCAAAATTATAATTAGCAATTATTTTTACATATCTTTTATATACATAACTTTTACAATGGCTGCCATTATCATGTAGGTTCTTAGGAAGTGTTTCTGATCCTTGTAAATAAAAGTGAAAGAAGAAATCTTTACTGCTTGCTGACCCATGTGACTAACCTTGAAATCAGAGAGGCAGATTCATTTAAAACAAACTTGCAAACTGTTAAGCAAAGTACTGAATCTCTGTGACTTGACCAAAAGTAATTCAGACTTGACTATTCCAGGCTCCCTTCTATCTCTGTAGCAACCCATGCATCATAGACTCCAGTTGCAATGGATGGTCAAGGAATCTGCTGTGCCTTTTGAGTCTCTCCATTTTATATTGCCAAATTTATCTTCCTTTAATACTTCACTTCACATAAGACACTAAGATAAACAAGGATGCAACTCACTTATATTTcaaaatagtacctagtggttaaaagtacttgttctgaaagcaactctatttttctagttctaacatgtctccaactagttatctcaccttgagcttggcacataatcactccatcttacttttgcatctgtgacacaagaaaaataccacccacctcaacatagatcttatgaagattaaaataagattatgaaagtaaaatgctcagcacaatgtctaaacgaaaataaatgctcagcaagtaggagctactataattATTATCcagatcaaatattttctcctctatgaagctttcttattcttccccagctggaattacttattttcttccttgctttctacaccacactttagtcaccaccatgctggcacttgtctcaccgcattataattatttatgtgcctgtgttccataaccagaatatgggACTTAAGCTTCTTTATACCTCCAGCATAATTGTTTCATGTGTGCTTTTAGGTAATGGAGTAAAATGGATGAATGAGTGAATGCGACTATAGTACTAAATGCTCTTAGATAAAGATGTAATTATTCTTAAGTGATAAAATTATTCGAACATGAGTAGTTCAGATAATGAGAGACTGTCATAGAATTACTTGATAAAATCTAGTCAATAAAATGGCTTGGCAATATAACCTTTATGATTTCTTTAAACAATCATTCATTTCTTTCTGAAGATGAGAAGAGGAGATTCCTTCTCCCATCTTTATATTTCAACAATGATTAGAAAACAAATTGATCTCTGGGATCAGTGCCCAATACCATTAAAGTGGTATACATCTTACAATTCTTAATTAATTTGTGGCATACATATACcagtctccacagccagcttcatctgcatacagcagcataatcacttttttccttatagtaaagacatattatgagtcatcaaagtcttctccgggggttgtggttatcatctggtaatcacacccttgggaggttaaaaacacttatctttggatcatgacttgcaatgccccaggggtgtgattatctcaggcaactcacactttctgtcatgcctaattgcttaattattatagctgcaagttcacaccaccatacaggaactca</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:NONHSAG052570]]
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[[Category:Intergenic]][[Category:NONHSAG052570]][[Category:Transcripts]]

Latest revision as of 07:20, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT131890

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3647 nt

Genomic location

chr9+:75972818..75985283

Exon number

8

Exons

75972818..75972934,75973724..75973823,75977390..75977804,75978473..75978609,75979340..75979914,75981013..75981303,75982106..75982282,75983449..75985283

Genome context

Sequence
000001 atttaatggg aagcagatgt ctcacagaca cctcaagctc aacgtccTGT TCCCACCCTC TCACTTTCTA TTGAAACTGT 000080
000081 CTCTGCTGTC TGTACTCCCT TCCTTGTTCT TTTGCACCTG GACTAGACAG AAGACTACAG TTCAATAAGA AGGAAACACA 000160
000161 TTCATTTTCA GTATTGTTAA TAAAGAAGCT TACCTAAAAG AAGGAAATCA AAACAAGTAT AGAGAGAGCT ACCAATAGGA 000240
000241 Gcaaaaaaaa caaacaaaaa caacaacaac aacaaaaata aaaCAaaaaa accgttttca cgaggaactt tgaggataca 000320
000321 atcatctctg cttgggagcc ACTGCCACAG AATACAAAAG AAATGAACAT GAAGAGGTTT GCATTTTTCT TGCTGCACAT 000400
000401 TAGGCTATTA AACATCCTGC ACACGTTCTG TGGCTTCTTT CAGATAATCT ACACTGCAAC TAGGGGAGGC TATTGAATGT 000480
000481 GATGGTCCCC TCAGATGCCT AGAGGAAGAT GAACAATGGT AATCAGATAT CCTAAAGTTA TCTTTAGGGC ACTGGCAAAA 000560
000561 TAGCAGCAAT GCCTGGTGGA AGCTGACTTT GTGCATACAC ATGAGAGCCC ACAGAAAACT TCAAACTTCA TGGGAAATAA 000640
000641 AACCTTCAGC TGCAGCTAAG AATTTGGAGG TTACTGAAGG AGGTTACTTT TTCAAGAGCA GAAGTAAGGA TTCCACTGAA 000720
000721 TTTGCTCACC AAAGATAAGT CAGCAAAGAA AACTTACTGA AGAATACAGG AGcctgtgag gtgagtaaca ttattatgtg 000800
000801 atttaacaaa tgaggaaact aaagtcctta aaaatggtgg cttTTGTTGA CATATGTTGT TTTGAATGCT TTCCTTCCTG 000880
000881 TTCCCCATGA TTTGGCAGGA GTTCCTTGGG AAACGACTCC TCCACTGAAT GCAATCAAGT TAAAACTATC AAGCCATATA 000960
000961 CTTTTCTGCC TTCTACAAGA ATAAATGATG GTCAAATGTT CTTTCTTTCA GGAACATAAA TCTTAAGCAG GCTTACATAA 001040
001041 GGAAGGGAAG TGGTTGAATC TGAGGTAATT CCATGGTGGA CTTTGAAGAA AGCCTTCCAT GAGTTCCCAG TCCATATCCT 001120
001121 CCAAAAGGTT TCTTGGATAT GCTTTATTTA TGCCTAATTT TCCAGTTTTC TCTTTAATAT TGTGTGCTCT AATATTTTAT 001200
001201 TCTCTCTCTT TTTTTTGCTT CACTTAGTTA GAATTTCTTT CAGCCAATGA AGAATTCTAT TGAGAAGCAT GAATCTGTAA 001280
001281 TTTTGCATAT TCCAGAATAG TTATGATCTA AACATTACAT CCTGCTGTAT CCCTAAGTAC TTGATGCAGT TAAGAAGTAT 001360
001361 GACATAATTA TGTCCATTTA CCCATGTATA GTTATCAAGT AATAATTATT GTTTTCCCCT GCCTATTCTA GAAAAGATTT 001440
001441 TAAGTAGCTG TGTTTTTAAA TTTAGTAATT TTTAACTTGA ATCTCCACTG TTCTCAGACA GCATATCAGC TCCTGCTTTC 001520
001521 CAGACAAACT TCCTGGGTCT TGGGAAGAAG AAAGCCTCAg actaagaact ctctctggac tcagacagcc tgaattcaaa 001600
001601 tcccatctct attcttacta gtcatatgaa cacagGATAG TGAAGAATGA AAGAGAAGCA AAACAGATCC TGCAGGTTGT 001680
001681 GCTCACCACG GTGAAAATCA TTATTTGCAA CTCCCACAGG AGAACCATAT CCATTCAGCT CACTTTGGAC CACCTGTGGA 001760
001761 GCCTGATAAC CAGGGAACAG AGAACCTGTT GAGATCCAAA TTTGTGTGCC AGGATCACAA ACTCATCTGA AGCAGATGCC 001840
001841 ACGTGTTACA CTGTTATGTC TCTCAGAGAC TCCAGCACTT TGAAAGTATT AGGCCTTGCT TATTGAGATG AATATTTTTT 001920
001921 TCTAGGCATG TCCCAAAGTT CTCAGCATAG CTACAACCCT GATTTTCACA GGATTTTCAT TAAAATTAGG TTCTAGAGCA 002000
002001 TTACTTCCCT AATGTGCAAT GCAACTTACG TTTAGTTTTC AAATCAAAAT TAGTTTTGTT TTTCCACTGT CTTTGTCTTT 002080
002081 GAAAATATTG AACTTGGGAT TTCCAAAATT ATAATTAGCA ATTATTTTTA CATATCTTTT ATATACATAA CTTTTACAAT 002160
002161 GGCTGCCATT ATCATGTAGG TTCTTAGGAA GTGTTTCTGA TCCTTGTAAA TAAAAGTGAA AGAAGAAATC TTTACTGCTT 002240
002241 GCTGACCCAT GTGACTAACC TTGAAATCAG AGAGGCAGAT TCATTTAAAA CAAACTTGCA AACTGTTAAG CAAAGTACTG 002320
002321 AATCTCTGTG ACTTGACCAA AAGTAATTCA GACTTGACTA TTCCAGGCTC CCTTCTATCT CTGTAGCAAC CCATGCATCA 002400
002401 TAGACTCCAG TTGCAATGGA TGGTCAAGGA ATCTGCTGTG CCTTTTGAGT CTCTCCATTT TATATTGCCA AATTTATCTT 002480
002481 CCTTTAATAC TTCACTTCAC ATAAGACACT AAGATAAACA AGGATGCAAC TCACTTATAT TTcaaaatag tacctagtgg 002560
002561 ttaaaagtac ttgttctgaa agcaactcta tttttctagt tctaacatgt ctccaactag ttatctcacc ttgagcttgg 002640
002641 cacataatca ctccatctta cttttgcatc tgtgacacaa gaaaaatacc acccacctca acatagatct tatgaagatt 002720
002721 aaaataagat tatgaaagta aaatgctcag cacaatgtct aaacgaaaat aaatgctcag caagtaggag ctactataat 002800
002801 tATTATCcag atcaaatatt ttctcctcta tgaagctttc ttattcttcc ccagctggaa ttacttattt tcttccttgc 002880
002881 tttctacacc acactttagt caccaccatg ctggcacttg tctcaccgca ttataattat ttatgtgcct gtgttccata 002960
002961 accagaatat gggACTTAAG CTTCTTTATA CCTCCAGCAT AATTGTTTCA TGTGTGCTTT TAGGTAATGG AGTAAAATGG 003040
003041 ATGAATGAGT GAATGCGACT ATAGTACTAA ATGCTCTTAG ATAAAGATGT AATTATTCTT AAGTGATAAA ATTATTCGAA 003120
003121 CATGAGTAGT TCAGATAATG AGAGACTGTC ATAGAATTAC TTGATAAAAT CTAGTCAATA AAATGGCTTG GCAATATAAC 003200
003201 CTTTATGATT TCTTTAAACA ATCATTCATT TCTTTCTGAA GATGAGAAGA GGAGATTCCT TCTCCCATCT TTATATTTCA 003280
003281 ACAATGATTA GAAAACAAAT TGATCTCTGG GATCAGTGCC CAATACCATT AAAGTGGTAT ACATCTTACA ATTCTTAATT 003360
003361 AATTTGTGGC ATACATATAC cagtctccac agccagcttc atctgcatac agcagcataa tcactttttt ccttatagta 003440
003441 aagacatatt atgagtcatc aaagtcttct ccgggggttg tggttatcat ctggtaatca cacccttggg aggttaaaaa 003520
003521 cacttatctt tggatcatga cttgcaatgc cccaggggtg tgattatctc aggcaactca cactttctgt catgcctaat 003600
003601 tgcttaatta ttatagctgc aagttcacac caccatacag gaactca
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