Difference between revisions of "ENST00000430058.1"
Chunlei Yu (talk | contribs) |
|||
| Line 1: | Line 1: | ||
| − | + | PTCSC2,shorted for papillary thyroid carcinoma susceptibility candidate 2, may functions in papillary thyroid cancer. | |
==Annotated Information== | ==Annotated Information== | ||
===Transcriptomic Nomeclature=== | ===Transcriptomic Nomeclature=== | ||
| − | + | PTCSC2:papillary thyroid carcinoma susceptibility candidate 2 (non-protein coding)(HGNC nomenclature) | |
| + | |||
| + | ===Characteristics=== | ||
| + | PTCSC2, a 1635 bp long intergenic noncoding RNA gene and locus in 9q22.33,named papillary thyroid cancer susceptibility candidate 2 (PTCSC2)<ref name="ref1" />. | ||
===Function=== | ===Function=== | ||
| − | + | PTCSC2 plays an important role in the predisposition to PTC(papillary thyroid cancer)<ref name="ref1" />. | |
===Regulation=== | ===Regulation=== | ||
| Line 23: | Line 26: | ||
==Labs working on this lncRNA== | ==Labs working on this lncRNA== | ||
| − | + | * Human Cancer Genetics Program and Department of Molecular Virology, Immunology, and Medical Genetics<ref name="ref1" />. | |
==References== | ==References== | ||
| − | + | <references> | |
| + | <ref name="ref1">He H, Li W, Liyanarachchi S, Jendrzejewski J, Srinivas M, Davuluri RV, et al. Genetic predisposition to papillary thyroid carcinoma: involvement of FOXE1, TSHR, and a novel lincRNA gene, PTCSC2[J]. The Journal of clinical endocrinology and metabolism. 2015,100(1):E164-72.</ref>(1) | ||
| + | </references> | ||
{{basic| | {{basic| | ||
tID = ENST00000430058.1| | tID = ENST00000430058.1| | ||
source = Gencode19| | source = Gencode19| | ||
| − | same = lnc-C9orf156-3:1,NONHSAT133533| | + | same = lnc-C9orf156-3:1,NONHSAT133533,''PTCSC2''| |
classification = intergenic| | classification = intergenic| | ||
length = 204 nt| | length = 204 nt| | ||
Revision as of 11:35, 20 April 2015
PTCSC2,shorted for papillary thyroid carcinoma susceptibility candidate 2, may functions in papillary thyroid cancer.
Contents
Annotated Information
Transcriptomic Nomeclature
PTCSC2:papillary thyroid carcinoma susceptibility candidate 2 (non-protein coding)(HGNC nomenclature)
Characteristics
PTCSC2, a 1635 bp long intergenic noncoding RNA gene and locus in 9q22.33,named papillary thyroid cancer susceptibility candidate 2 (PTCSC2)[1].
Function
PTCSC2 plays an important role in the predisposition to PTC(papillary thyroid cancer)[1].
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
- Human Cancer Genetics Program and Department of Molecular Virology, Immunology, and Medical Genetics[1].
References
Basic Information
| Transcript ID |
ENST00000430058.1 |
| Source |
Gencode19 |
| Same with |
lnc-C9orf156-3:1,NONHSAT133533,PTCSC2 |
| Classification |
intergenic |
| Length |
204 nt |
| Genomic location |
chr9-:100568217..100572290 |
| Exon number |
2 |
| Exons |
100568217..100568306,100572177..100572290 |
| Genome context |
|
| Sequence |
000001 TGTCCTGGGG GAATAATTAT GTTCCCTGTC TTGGGAGCCT TTCTTCAGGG AGCTTGATGG TTCCAACCCA CCCAGGAGCC 000080
000081 TGGGACATCT GTGCCCCTGG GCAATCCCCT GCAGTTTCCT GATTCCAAGA TGAGGGGGTA GAATCCGAAG ATCTCCAAGG 000160 000161 CCTTGATGAG TGCTACCAGT CTGCAAATTC CCAAGCCAAG TTCT |
