Difference between revisions of "HDHD5-AS1"
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===Characteristics=== | ===Characteristics=== | ||
| + | HDHD5-AS1 is adjacent to the human CES critical region (CESCR)<ref name="ref1" />. | ||
The distance between HDHD5-AS1 and the adjacent gene CECR5 is at least 99 bp <ref name="ref1" />. | The distance between HDHD5-AS1 and the adjacent gene CECR5 is at least 99 bp <ref name="ref1" />. | ||
HDHD5-AS1 is considered to be an unprocessed pseudogene <ref name="ref1" />. | HDHD5-AS1 is considered to be an unprocessed pseudogene <ref name="ref1" />. | ||
| Line 18: | Line 19: | ||
===Conservation=== | ===Conservation=== | ||
The sequences of exon 1 of HDHD5-AS1 is conserved in human and mouse <ref name="ref1" />. | The sequences of exon 1 of HDHD5-AS1 is conserved in human and mouse <ref name="ref1" />. | ||
| + | |||
| + | ===Function=== | ||
| + | HDHD5-AS1 can be seen as a candidate gene for involvement in CES <ref name="ref1" />. | ||
===Disease=== | ===Disease=== | ||
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| | Testis | | | Testis | ||
|- | |- | ||
| − | | rowspan="1"|CECR4 | + | | rowspan="1"|CECR4 (HDHD5-AS1) |
| |cDNA 321686 | | |cDNA 321686 | ||
| | 7 | | | 7 | ||
Revision as of 01:31, 26 September 2017
Contents
Annotated Information
Approved Symbol
HDHD5-AS1 (HDHD5 antisense RNA 1）
Previous Symbols
"CECR4, CECR5-AS1"
Synonyms
NCRNA00017
Chromosome
22q11.1
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Genomic structure of the genes in the CES critical region (CESCR). [1].
RefSeq ID
NR_024483
Characteristics
HDHD5-AS1 is adjacent to the human CES critical region (CESCR)[1]. The distance between HDHD5-AS1 and the adjacent gene CECR5 is at least 99 bp [1]. HDHD5-AS1 is considered to be an unprocessed pseudogene [1].
Conservation
The sequences of exon 1 of HDHD5-AS1 is conserved in human and mouse [1].
Function
HDHD5-AS1 can be seen as a candidate gene for involvement in CES [1].
Disease
cat eye syndrome
Expression
| Gene name | Probe used | Size of transcript(s) in kb | Tissues showing expression |
|---|---|---|---|
| CECR8 | cDNA 1840041 | 1.4 | Testis |
| CECR4 (HDHD5-AS1) | cDNA 321686 | 7 | Adult heart and skeletal muscle, all fetal tissues tested |
| CECR3 | cDNA | 2.4 and 3.7 | 2.4 kb—predominantly in lung; 3.7 kg—weakly in all tissues |
Labs working on this lncRNA
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada. [1]
References
<references>
[1](1)
