Difference between revisions of "MAGI2-AS3"

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Line 44: Line 44:
 
===pubmed IDs===
 
===pubmed IDs===
 
27816668, 29679339
 
27816668, 29679339
==Labs working on this lncRNA==
 
* Affiliated Hospital of Taishan Medical University, Tai’an 271000, Shandong, People’s Republic of China
 
==References==
 
<references>
 
<ref name="ref1">
 
Yang Y, Yang H, Xu M, Zhang H, Sun M, Mu P, Dong T, Du S, Liu K. Long non-coding RNA (lncRNA) MAGI2-AS3 inhibits breast cancer cell growth by targeting the Fas/FasL signalling pathway. Hum Cell. 2018 Jul;31(3):232-241.
 
</ref>(1)
 
</references>
 
  
 
===Sequence===
 
===Sequence===
Line 177: Line 169:
 
AGCTTAACTATTGCTTGGCTACAAGCATGGATAACTTGTTCAAAGATAATGAGGAGTTGTAAATATTTAA
 
AGCTTAACTATTGCTTGGCTACAAGCATGGATAACTTGTTCAAAGATAATGAGGAGTTGTAAATATTTAA
 
ATAAACAGGATTTGCAACATAAAAAAAA</dnaseq>
 
ATAAACAGGATTTGCAACATAAAAAAAA</dnaseq>
 +
 +
==Labs working on this lncRNA==
 +
* Affiliated Hospital of Taishan Medical University, Tai’an 271000, Shandong, People’s Republic of China
 +
==References==
 +
<references>
 +
<ref name="ref1">
 +
Yang Y, Yang H, Xu M, Zhang H, Sun M, Mu P, Dong T, Du S, Liu K. Long non-coding RNA (lncRNA) MAGI2-AS3 inhibits breast cancer cell growth by targeting the Fas/FasL signalling pathway. Hum Cell. 2018 Jul;31(3):232-241.
 +
</ref>(1)
 +
</references>

Latest revision as of 07:55, 13 August 2019

Annotated Information

Name

Approved Symbol: MAGI2-AS3

Approved Name: MAGI2 antisense RNA 3

Alias symbols: ENST00000414797

Chromosome:7q21.11

RefSeq ID: NR_038343

LncBook transcript ID: HSALNT0289161

Characteristics

-

Function

  • MAGI2-AS3 significantly inhibited breast cancer cell growth by targeting Fas and FasL[1].

Regulation

-

Diseases

Breast cancer[1]

Expression

lncRNA MAGI2-AS3, Fas, and FasL expression levels in breast cancer tissues and breast cancer cell lines.[1].

MAGI2-AS3 is down-regulated in breast cancer tissues compared to normal adjacent tissues[1].

Experiment Forward primer Reverse primer
Quantitative real-time PCR 5'-CACCTTGCTTGACAACTTGA- 3' 5'-CATTACAGCTCGGCTACTGC- 3'[1]

Evolution

-

pubmed IDs

27816668, 29679339

Sequence

>NR_038343.2 Homo sapiens MAGI2 antisense RNA 3 (MAGI2-AS3), transcript variant 1, long non-coding RNA

000001 GAGGCAGGCT GGGTCCGCCT GGCAGCCTAC GGGAGGAGGC GGGAGCCGGG AAGGAGGGGA GCCTAGGCCC GGCGTGGGGA 000080
000081 GGCCGGCAGG AAGGGCCTCG AGCCCAGTGC GGACCTTTCT TCAGCCTCTG TGCGACCGAG CCGCGCGCCA GGCTCCTGTG 000160
000161 CGAGGAGGAC GCGCTGACTC CCTCCGACCT GGGCTCCGAT GGAGCAGAAA TAGCGGGACC TGGACTTGTG GCGCGCCTGG 000240
000241 TGCCACATCT CGGGCTCTGC GAGCGTCCTG GCGCGGGATC CTGCCGTTTG CATCCAAGAG AGGGGAGGAC AGGGGCAAAA 000320
000321 GGATGCAGGG AGGCTGCTGA TTTCCACTGA AGAGCTAATT TCCTGTGAGA CATTAACAGT GATTTAAGAA AAAGATTCCT 000400
000401 GTAACTGTAA TGTCTTACAA TAACAGAATG CAGGAGAGCA CATATCAATG AAGAAAAGAC AAAATGTACT TATCCATGAA 000480
000481 GCTGAGGTTA AGAAACCAGT GTCTTCAAGA GCCAGGGACA GCACTGGGTC TGTGCAGAGT TGAGAGATGG TGATGACATG 000560
000561 TGGTTTCCAG CATTCCTCAC CCAGTCCAGG GACACTGTGG GTGTGCCCAG CTTAAGTCCA GTAACTGGAA ATACAAGCCC 000640
000641 AAGTTCTGGA GAGTTTGAGC TGCAGAGATA TATATGGGAA CACTTTGAAT CTTGACTCAT TGGCCATAAC CAGCAGAGTG 000720
000721 GAAAATACAA GAAGAGAAAA AAACATTGAA CTGCGATTTT ATAACATCCT TTACTAGGCA GAGAGAAGAG GAAACACCAG 000800
000801 GAAAGAAAAC TGTATTACGA TGTGAAAACT TAATGTTGAG AAATTCAGGC ATCTTGGGGT TAGTGAGGAG AAGTTTTAGG 000880
000881 GGCTTAGATT CTTCTAAACA CATGTACAGA AATGCATATT TCATCTGATA TCAAATGGCA TTTATAGTGC TAATCTTTAC 000960
000961 CTCAAGACTT CACATCTTTT GGTGATTGCA TCTTTTAGGT TTATAGCAGC TAAGTTTGCA TGAAAACACC AGGGCTGTTT 001040
001041 CATTTCAGTC AAGAATTAAT GTTCATTGAT TGTGCTTCTG CATTTCATGT AACTATTGTA GAATTTGTTT TAGTTTTATG 001120
001121 AGGGAATAAT TGTTCCAACT TCTATATAAC TCAGGAATTT ACTCTCAAAC AACACTGTCA ATTAGTTACT TATCTCTCTG 001200
001201 GAAATGATCT GGGAACATGG AGAGGAAAGG GAGGAAGGGG CAAAATCTGA CCACTTAAAT CTAAGCATAT TAGATCATTT 001280
001281 TATGCTAGAA AGTCCTGAAT GATGTGACTT TCGTTCTTGT AAAACACCTC TTTCCATAGA TTCATGGCCC AAACAGTATA 001360
001361 TAAAGAGTGG GGAAGGAACT GCATTTGCAA ATAGTTCAAA TCATTGCTCC ATCTTAACTA CGCAGTTCAC AAAGTGTGAA 001440
001441 GAAATGTGAT CATCTCAAAA AAGATAATGG GGAAAAAATA TGTTTTGTTC TGTGACTTTA AAGTCTTGCA ATATTTTACA 001520
001521 TAAATGATAA TGGGTGCTTT AATAAGAACT CTTGATACTT TTGTTATTGT ATTCAATATA TGCATATAAT ACAACAGGAT 001600
001601 GATATTGTTT TGGATTTGGA AATGTATTCT TTCTTATGCA ATCTTATGCA GTCATACTGC TTGAATATCA TTACCTGAAT 001680
001681 TTATCTTTCT TTTTTTTGTT GTTGTTTTAC ACTCTACTTA TTTGGTGCCT GTCAGTCTTT TGTCGTCAGT TTATATTCTA 001760
001761 CTAAACTCAA AAAGACAATC TCATACCTTT TGTAATTGTA GGCATTCTTT ACTAGATTTT TAAATACACT TCAAAAATTC 001840
001841 AAGTACTTTG ATTTCATGCC ATCAAGTAGC TGAATCTATC CCCCCGTCTC TTTTTAAATT TAAGTGAGTA GTTCAATTTC 001920
001921 TGTCACTTTC TACTTTGTGA ATTCTAAATC TTTTAAAACC ATCTTGCCAT TTTTCGTGCA CTTACCCTTA CAGAAAACTC 002000
002001 TGTGAAACAC TACTTATCTC TACTTTTATG TTTTTAACTC CTTTTTTATA TTACTATTCC CTCTGCTTTC TAAATGCACA 002080
002081 TATTAATTTG TTCTTTTTAT TCTCTGTAGC TCTTCTCAGT GTATGAATTC AGTTTCCCAT CAGTCTCCAT ACAATTAAAA 002160
002161 AAAAGTTGAG TATTCTGTTA TTTTAATAAG ATATCTAGTG CCCATATTCT AATTCTGCCC CTTATTTTTA ATATAATTTT 002240
002241 ATTGTTGATT TAAAATGACA ACAGTTTCAA TTCCCAGAAA GTGAAAGGAA ACAAAGGAAT AATATTATAG GCTTAATTTT 002320
002321 TATCAGTGAA CTTGTAGGTG AAGAAAAGAT TTGGGGAAGG AAATGAACAT ATTATATTGC AAAATAGTAA GGAACAATCA 002400
002401 GATGTGTTTT CTAGTCTCTG GAAAAGCATG TTTCAAGAAA TTCAATGAAA AGTTCATCAT GCTTGCTTAG ATTGTTGAGA 002480
002481 AGCAAAAACA CTGATGAACA TTTGGAAGCA ATGAGAATGT AATTCTAATC ATACTCTTTT AATAATGTTG CAAAACTCTC 002560
002561 CAAACACTAC TCTGTGTGGA TGTCTTTCAG AATATGATGA ATACTAGTAG TCTTATTCTG CCCTTTTCTC TCTATCACAA 002640
002641 TATATACATT CTATATTGCA TACACATATT TTCCAAATAT TACATATAAT TTCATGTAAT TTATAGACCT ATTAAGGCCC 002720
002721 AACCATTTTC TTGGATAGGG GATTCTTTAG AAGTCCAGCT TAAATAAAGC CCGTATAGAA AGTTTTTTTA AAATTTATAC 002800
002801 ATAATCACCT AAAGTAACCT TATCTACTGA ACTCTTAGTA CATGCTACTG GAACCTTTTA TCATGTTTCT TCCTGGCTTG 002880
002881 CATTACAACA CTGTTGACAT ATCTCAGCCT TACTTCTAGG CTTCTTTGAG AGCATGACTC ATGTTTGTAT TCCTCACTGA 002960
002961 GGTTGAATGA ATAAGAGAAA CTACAGTAGT AGGAAAAAAC AGTACATGTA CATATCAATG AATATGAAAG GGTCAAATGG 003040
003041 ATCTATTATA GTAAGCACAA AATCAACTGA CACCAGCAAA GTAAACCCAA AATTTTTAAT GGTATTTTAA TAGATCAAGA 003120
003121 GGAGCAAGCA GATTTTTGAG ACAGTTGTCT CCTACTTTCT CTATCACAGG GAGTAATTTT AAAAGAAAAA TGGAGGGTAA 003200
003201 GTTTCTTTAA GAGAAAATTG TAGTTTAAAA CAGGTCATGG GATAATTAGA AATAATTTAA TTTCTTTAGA GGATTTTAAT 003280
003281 CTTTCAACTG CTTGCAATTA GATCCTAAGG CAATAAAAGA ATAAGGAGAT TTGGAAAACC ATTGTCTGTA ATCTCTGAAG 003360
003361 AAAAGTGGAC ATTAGGGGAG TCAGTTGAAA AGCAAAGCTA TCACCATTTT CTAAAGAGGA AAAAGGTGAA CCTCACAAAC 003440
003441 TATAGACCAA AAAAATAGGA CATCGAGAGA AAGAATATGA AGCTAGCATA GGTTCACAAA GAATGAGTCA AATCAAACAA 003520
003521 CATGCATTTT TTATTTATAA AGCATGACTT GTTCATTGTC AATTCATGTT AGCTTAATCA TTAGGCATTA ATGCCATCAC 003600
003601 TGCAATGCAT ATGTCAGCAA TAAATAATCA AAGACCAGGC TTCCATCATT CTGTTTAATA TCTTCAAGTA ATGCTTAAGT 003680
003681 TTGCAAATGC TCTTTTAACA CATTCTCCAT ATGCAGCCTG CCCAGCACTG CACACAATAG ACCTGTTACT TCCCCCTCAC 003760
003761 GAGCACTCCT AATATTTCAT GTGCTCATCC AATTGACTTC TCCCACTGGT GCCTCATATT GAATTTGTAG AATCACACCT 003840
003841 GCTCCTTTTT CAAAACTCTT CTGAGTTTTT TCTTAAATAA TTCACTGACC CCAAAGTTGT CAGATATTTG AAGACTACTC 003920
003921 GCACAATTTT AATATTATAA ATGTATAATG TAAATGTAAT TAAGATTTGT ATAATGTACG ATGTACTTTG GTAAATAAAA 004000
004001 GTATGCTGTG AATAAATACG TATGATACAA TTCAAAATTT TACATAAATA TGTGATAAAA TTTAGCTCAT ATTCTTTTTT 004080
004081 TTTTTCTTTG AGACGGAGTC TCACTCTGTT GCACCCAGGC TAGAGTGCAG CAGCATGATC TCAGCTCACT GCAACCTCTA 004160
004161 CCTCCTGGGT TCAAACAATT CTCCTGCCTC AGCCTCCTGA GTAGCTGGGA TTACAGGTGC CCGCCACCAT GCCCAGCTAA 004240
004241 TTTTTTTCTA TTTTTGTTGT TGTTGTTGTT TTTAGTAGAG ACGGGGTTTC ACCATGTTGG TCAGGCTGGT CTTGAACTCC 004320
004321 TGACCTCAGA TAATCCACCT GCCTCGGCCT CCCAAAGTTC TGGGATTACA GACGTGAACC ACGGTGCCCG GCCTAGTTCA 004400
004401 TGTTCTTTAA GGACAATTAT GAATATTTTT ATGCACTGTT AATTTTCATT AAGATATTGA TCAATTAATA GCTATATATG 004480
004481 TTCTATAAAT TAATCCTATC TAGTTTCAAT CTTAAATTGT TTGCATATAC CAATCTAGTT TATTGTTTGC ATATATTTTA 004560
004561 TAGTGTAGAG ATTAGGCATT TTAATAAAAT TTTAAAATTT CCAGGACATA CTGTTAATGA CTATGCTTCC TACTATAGGC 004640
004641 CATAATTAAT TTTTTTCTAT TGTCAACAAT ATTTTGGTAG GGATGATCAG GAAATAAGGA AATGTTTCCT TCATTTGTTA 004720
004721 ACAATAGGTG TTTGGGGATT TTAAAATGAA AATTGAAGAA GTAAAAGACA CCATATATTT AGTTTGTTTG ATTTCGTGGC 004800
004801 TTCAAGAGTT CAATAATTTA TTGAAATATT TTACAGACCA AAGAACAACA GATATATTAC GTTTATAAGC CCCCACATAT 004880
004881 TTTAAAGGAT AATGGTTTAT ATATGAAAAT TCCCTGAACC TACACTTCAT CAGGAAAAGC TAAATAAAAG AAGTTTACAT 004960
004961 TTCCTAGGAC TAATGGAGAT TTATTTCCCA GTCCTCTTCT CTGGAGACAA ATGTAGGTCT CTCTTGAAAA GCAGAAAGTT 005040
005041 TTGCATATGA GGTATGATTT AGTGGGCTAG AAACATCTTT TCCACCCTCC CCAAAATGTT TCACTATGTT TTATCATACT 005120
005121 ATCTGATAAT TTTGCACTAA AGTTTTCTTT CTGTGTTAAG AAAATGCAAA TATCTCTGAA TGGGTCTCTT TGCTTTAGTC 005200
005201 ATACTCATAT GGCTACTACT GAACAAAATA TGTTCATTAC AGGATGAAGG GAATGTTGCC AGCCAGCAAA TCCCTAGAGT 005280
005281 TTGCACTACA CCAAACGTTG CTTAGCAATT TCCACGATTT TCTCAGTCTA ATTTGCAAGA ATCAAGGAGA TGTTTGTGTA 005360
005361 TGCTACATGA AGTTGTAAAA TTGGTATTTA TTGTATGTTT CTATATCGAA AGCTTTACAA ACAAAGGAAA TGGAAAGTTA 005440
005441 ACAGGTGGAT ATGATAGTGT GGCACTACTT TAGCTGGATG GTAAGGGAGA GCTTCTCTTA GGAAGTGTTT TAGGCCAGGA 005520
005521 CTTGAATAAT GAACAGTATC TAGTTGTACA AAAATCTGGA GGAAAGACTT TTCAGGCCCA GGAGAAATGA AAATTCTTTT 005600
005601 CATGCATACA AGAATGAAAG TGAAAATTAC CTACTCTATG TCCTGAAGTG GGAAGTTGGC TTGCCAGAGA GTAGGTAATT 005680
005681 TTCACTTTGA TTCTTTCATG CCTTCAGTTA TACTACTTCT TAGGTTAGTT CATAAGGGTT TCCACAATTT GGTTCCCACT 005760
005761 TAAAATTTAA AACTTCCCTA ACCCATTCCC ACCATATATT GTGCTAATCC ATGCATATGT GACTTTGCGT ATGCTGTTTT 005840
005841 CATTGTTTAA TATTCTTCTC ATGCATTCGT TCTTTCCTGA TAACGAACTC ATCTTTGAAA CTCCCCTTCA AGCATCCTCT 005920
005921 ACTTTAGGAG GCCGCTTCTC ACTGTCTCCT GCCTACCACC CATTGAATTG TTCAATTTTT AAGCTGCCAT TGTCTTGTGC 006000
006001 AGTTGACACA TTTCTTTGCA ATTACTGATT TACATGTCTG CTTTTATCAC TGGTGAGGTT CTTTAGGACA GAGACATTAT 006080
006081 TAATTCATCT CTGGGCACAT ATGTTCCAAC ATATTAGAAG TACTACAGAG TGCTATTACT ATGTAGTATG TAGTATTAGT 006160
006161 AGTAGTTACT CACAAATCAT TTTTAAATAA GTGATTATAA TATCTTTTTG TTATTATGAT TTAACACAAG ATGGAATTTA 006240
006241 TTTTCAGAAG TTTCCATGAT ATATTTGTTC TATTTAAAAT CCAATAGCCA TTAGAATATT ACCATTATTT AATGTAAAAC 006320
006321 AATAAAATAT TAAATATGAT CGTTCATATT TAATGCAAAC CGAACTCATG GAAATATTGT GTAAAGATCA AGTAATTTTT 006400
006401 GACATACAAT TTTAAACTCA ACTTTTCATA TAGCATACCT TATGATATAT TTTCAGCCTA CTTTTAAATA TGTTGGCATT 006480
006481 GAAAGCCAGT TACTAATTCG CTGAATTCAT GATTTCTTTT TAAGTTATAG AAGTGGAATT ATGTTTGAGA TATTCATTGC 006560
006561 ATTACATTTA CCAGAACTTG AGTTCTTAAC ATGGAACCTG AGAGTTTCTC CAATTCTTAA GTCCCTGGGA GAAATAGATT 006640
006641 AGCTGGATGA GGAACTGAGA GGAAAAATGG TCAGAGATGT AGCAAGAGTT GGGAAGAAGG AACAATGATT TGCTTTCAAG 006720
006721 GAGATTTTTT CATTGGTCTG TTTTCAGTGA CAAACCCACT GCGATAATAC ATGTAAAGTG AAAACATTCA GGAAGTTCCC 006800
006801 TTAGAAACCT CTTTTCTGGC AGTTCCTAAT TCTACAACAT TGTATAAGTG AAATACCATA GTTACTGTCA TAGTAAATTG 006880
006881 AGCCAAGAGA AACAAGGGAG CAGGAGAAGA AAAGAATTAA AGAGAGTTTT GTCTTTCAGT CTTCACTCTG TTTCTTCTTG 006960
006961 CTTTTACCAG TCATTCAGGT TTATATAATT TCTTTAGAGA GGCTTCTACT ATGCAGGTCT TCCTTAAAGT CATTGGTATT 007040
007041 ACCTGGCATG ATATGTGAGC CTTTAATATC AGTCCCTTTA TCTCTTTATT TTTAAAGTTT ATATCAGTAC AGAGTCCTGG 007120
007121 ATTCTTAATT AATTTAATAG GTTAGACTTT ATGCTAATAT TCTTCATTTT GATGCTCAAA TTTTCCAAAA TTTGGCCAGC 007200
007201 AGGGTTCCTT AAAGCTGGGT ACCTTGCCCT TTCAACATGT CCCTCTGATT CTTTATTTTT ATTTACTTAT TTATTTATTT 007280
007281 ATTTATTTAT TTATTTATTT ATTTATTTAG AGACTGAGTC TTGCTCTGTC TCCCAGCCTG GAGTGCAATG GCACAATCTT 007360
007361 GGCTCACTGC AACCTCTATC TCCCAGGTTC AAGCAATTCT CCTCCCTCAG CCTCCCGAGC AACTGGGACT ACAGGCATGT 007440
007441 GCAACCATGC CTGGCTAATT TTTTTTGTAT TTTTAGTAGA GACAGGCTTT CACCATGTTG GTCAGGCTGG CCTCGATCTC 007520
007521 CTGACCTCAA ATGATCCATC GCCTCGGCCT CCCAAAGTGC TGGGATTACA GGCGTGAGCT GCCACACCCA GCCGTCCCTC 007600
007601 TCATTCTTTA AGTACTTCCA TGTTTTCTAA GGTACAAGAT GTTCCATATT ATTTTGTTAT TTGTCTTCCC CAGCTCTGAA 007680
007681 ATCTGCCTTT CCTTCAAGGA GCCTTGGTTC TTTCTAGTGA CAAATTATAT TTAGAAAGAA GATCTGGGTA TTTGACTTGT 007760
007761 ATATTGCTAT TAATTGGCCA TTGTTTCTAG TCTCTTTCAG TAGACAGAGC TAAGAAATGT AAAAGGAAAT ATTTGAATGT 007840
007841 ATGTATATGT GATATATTAA GTACATTTAA ACATATTAAA TTCATGAGTT CATACTAATA CTTTCAATAA GCCACAATTC 007920
007921 CCTTTTCATG TTTTCGAAGG AAAAATATCC ATTGTCTATA TACAGTGGAC ATAGATAGTA ATAATACTGA TCTTGAAAAG 008000
008001 AGCAGTCTTA AATAGATCCC ATTAATAGTT AAAGATAACA TATCTTAGAA TTCTAGATAT TAGAGAGATT ATCTAGAGCT 008080
008081 GTAATCTAGA TATTTTATAG ATCTTTGCTG TGCTGTTTTG AATTTGTGTT GGAGTAGAAC AATCAGATGA CAAAAGCTCA 008160
008161 TCCCACATGG AAAAATCAAA GCATTCATTA CAGAGAGAAT TTTGAAATAA ATGCATATAT AAAAAATATA TATGCATATA 008240
008241 TAATGCATAT GTATATGCAT ATAAAATATA TATATATAAA ATGAGGGTTA TAAACAATGA AGGAAATAGT GATACTATCT 008320
008321 ATGTGGGAAC AATACTAGTA TCCTCCCTTT GGATGAATAC AGTAGCTACA GATGCAATTC TGGGGACTCT GTTTAGCAAT 008400
008401 AGCTTAACTA TTGCTTGGCT ACAAGCATGG ATAACTTGTT CAAAGATAAT GAGGAGTTGT AAATATTTAA ATAAACAGGA 008480
008481 TTTGCAACAT AAAAAAAA

Labs working on this lncRNA

  • Affiliated Hospital of Taishan Medical University, Tai’an 271000, Shandong, People’s Republic of China

References

  1. 1.0 1.1 1.2 1.3 1.4 Yang Y, Yang H, Xu M, Zhang H, Sun M, Mu P, Dong T, Du S, Liu K. Long non-coding RNA (lncRNA) MAGI2-AS3 inhibits breast cancer cell growth by targeting the Fas/FasL signalling pathway. Hum Cell. 2018 Jul;31(3):232-241.