Difference between revisions of "NONHSAT074590"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CTTTTTACGTCTGAGAGATGCCCCTAAAAGTCAGAGGAAGAATCTTCTGTATGCTACCTGGACTTCAAAGCTCCCATTAGAACAGCTAAATGAAATGATAAGAAACCCAGGGGAAGGACATTTCTGGCAGGTGGATCACATCAAGCCAGTGTATGGGGGAGGAGGACAGTGTTCCCTGGACAACCTGCAGACTCTCTGCACAGTCTGTCACAAAGAGGTCAGTGAAGCTCTCATATAGCTTTGACTGCATCCTGAGAAGTCAAATGGAAAATTGTGCACACAGTTGTGGAAGATTATGTGGATGAATTTATCTCTGGTCTGAGATTCGAGGCACATTTTACTCCTTTCATCACCCAACACTTGCCTTTCCTCTCAAGGCCCGTGTCACAGATGCAAGAGAAGCTGCTTCCCTTTTCATTCATTCTAGGACCAAGACATTTGCACCACTACCAAGAAAGAAATGAATACAGTTTACATATTGTCTTGATGAGACCCGGATCCTCAAACTGGAAGTTTGGTGAATTGGGGCAGTGATACATGTTTGCATATAACTAAGGATATCCTGAAATATCTGAAAACATTGATAAGTTATCTCTAGGACCAACTCAGTT</dnaseq>| | sequence = <dnaseq>CTTTTTACGTCTGAGAGATGCCCCTAAAAGTCAGAGGAAGAATCTTCTGTATGCTACCTGGACTTCAAAGCTCCCATTAGAACAGCTAAATGAAATGATAAGAAACCCAGGGGAAGGACATTTCTGGCAGGTGGATCACATCAAGCCAGTGTATGGGGGAGGAGGACAGTGTTCCCTGGACAACCTGCAGACTCTCTGCACAGTCTGTCACAAAGAGGTCAGTGAAGCTCTCATATAGCTTTGACTGCATCCTGAGAAGTCAAATGGAAAATTGTGCACACAGTTGTGGAAGATTATGTGGATGAATTTATCTCTGGTCTGAGATTCGAGGCACATTTTACTCCTTTCATCACCCAACACTTGCCTTTCCTCTCAAGGCCCGTGTCACAGATGCAAGAGAAGCTGCTTCCCTTTTCATTCATTCTAGGACCAAGACATTTGCACCACTACCAAGAAAGAAATGAATACAGTTTACATATTGTCTTGATGAGACCCGGATCCTCAAACTGGAAGTTTGGTGAATTGGGGCAGTGATACATGTTTGCATATAACTAAGGATATCCTGAAATATCTGAAAACATTGATAAGTTATCTCTAGGACCAACTCAGTT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG029365]] |
Revision as of 05:51, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT074590 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
611 nt |
| Genomic location |
chr2-:135960008..135965088 |
| Exon number |
2 |
| Exons |
135960008..135960533,135965004..135965088 |
| Genome context |
|
| Sequence |
000001 CTTTTTACGT CTGAGAGATG CCCCTAAAAG TCAGAGGAAG AATCTTCTGT ATGCTACCTG GACTTCAAAG CTCCCATTAG 000080
000081 AACAGCTAAA TGAAATGATA AGAAACCCAG GGGAAGGACA TTTCTGGCAG GTGGATCACA TCAAGCCAGT GTATGGGGGA 000160 000161 GGAGGACAGT GTTCCCTGGA CAACCTGCAG ACTCTCTGCA CAGTCTGTCA CAAAGAGGTC AGTGAAGCTC TCATATAGCT 000240 000241 TTGACTGCAT CCTGAGAAGT CAAATGGAAA ATTGTGCACA CAGTTGTGGA AGATTATGTG GATGAATTTA TCTCTGGTCT 000320 000321 GAGATTCGAG GCACATTTTA CTCCTTTCAT CACCCAACAC TTGCCTTTCC TCTCAAGGCC CGTGTCACAG ATGCAAGAGA 000400 000401 AGCTGCTTCC CTTTTCATTC ATTCTAGGAC CAAGACATTT GCACCACTAC CAAGAAAGAA ATGAATACAG TTTACATATT 000480 000481 GTCTTGATGA GACCCGGATC CTCAAACTGG AAGTTTGGTG AATTGGGGCA GTGATACATG TTTGCATATA ACTAAGGATA 000560 000561 TCCTGAAATA TCTGAAAACA TTGATAAGTT ATCTCTAGGA CCAACTCAGT T |
Predicted Small Protein
| Name | NONHSAT074590_smProtein_152:304 |
| Length | 51 |
| Molecular weight | 5572.3192 |
| Aromaticity | 0.06 |
| Instability index | 69.968 |
| Isoelectric point | 7.62652587891 |
| Runs | 7 |
| Runs residual | 0.0246783625731 |
| Runs probability | 0.0333358568653 |
| Amino acid sequence | MGEEDSVPWTTCRLSAQSVTKRSVKLSYSFDCILRSQMENCAHSCGRLCG |
| Secondary structure | LLLLLLLLLLEEEELLEEEEEEEEEEEEEELHHHHHHHHHHHHHLLLLLL |
| PRMN | - |
| PiMo | - |
