Difference between revisions of "NONHSAT050896"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CGTGGCCCCAACCCCGCCTCCCTCCCCACCCCGCAATGGCAGAAGAAACTCAACAGAGCAAATTGGCCGCAGCAAAGAAAAAGGCAAAGGAGGACATCTGGACAGTGAGGAGGAGGCACCTCGGCCCATGCCAAGCAACCCAGAGGACCTGGAGAGCTGGGAGGCCACGGTGAAGTGGCCTTATGGACCTCCTGGAGGAGAAGGTGGACCTGAGGGAGCGAGCGGAGAAACTAGAACTTCGATTCATCCAGTACTGGAAAGACAGAAGTCATCAGTTAGTGGGAGGCCAGGGCACGGCAGGGGGAGCTGCAGGGCCGTCGGAGGGACCTCAGCGTCTGAGCCCTGTCCTCCTGCAGGAAAGTTCATCACCCTAGAACACAGCCAGGGGGCAGTGCCAAAGATGCGGCAACTGGAGGAGGACATCATCAGGCTGGCCCAGGACATGGAGGAGATGAAGGTAGGGTGTGCAACATCTCTGCAggggtgggggtgggcgtgagggtgggCGCCGGTAGATGCATAACAGCTGAGCACCCCTCCCTCCAGGTGAAGCTGCTGGAGCTGCTGGAGAAGATGTTGCGGCTTGTGGTGACTACAACGAGGGACACAGCAAATTCCCGGCCACTGCCCTGAAGCTTGCTGATGAGCCTGGTCCAGGAGCCCCAGCCCCCCAGGAGCTTGTGGGTGCTGATAAGCATGGTGATCTTTGTGAGGTGAGCCTCACTGACAGCGTGGAGCA</dnaseq>| | sequence = <dnaseq>CGTGGCCCCAACCCCGCCTCCCTCCCCACCCCGCAATGGCAGAAGAAACTCAACAGAGCAAATTGGCCGCAGCAAAGAAAAAGGCAAAGGAGGACATCTGGACAGTGAGGAGGAGGCACCTCGGCCCATGCCAAGCAACCCAGAGGACCTGGAGAGCTGGGAGGCCACGGTGAAGTGGCCTTATGGACCTCCTGGAGGAGAAGGTGGACCTGAGGGAGCGAGCGGAGAAACTAGAACTTCGATTCATCCAGTACTGGAAAGACAGAAGTCATCAGTTAGTGGGAGGCCAGGGCACGGCAGGGGGAGCTGCAGGGCCGTCGGAGGGACCTCAGCGTCTGAGCCCTGTCCTCCTGCAGGAAAGTTCATCACCCTAGAACACAGCCAGGGGGCAGTGCCAAAGATGCGGCAACTGGAGGAGGACATCATCAGGCTGGCCCAGGACATGGAGGAGATGAAGGTAGGGTGTGCAACATCTCTGCAggggtgggggtgggcgtgagggtgggCGCCGGTAGATGCATAACAGCTGAGCACCCCTCCCTCCAGGTGAAGCTGCTGGAGCTGCTGGAGAAGATGTTGCGGCTTGTGGTGACTACAACGAGGGACACAGCAAATTCCCGGCCACTGCCCTGAAGCTTGCTGATGAGCCTGGTCCAGGAGCCCCAGCCCCCCAGGAGCTTGTGGGTGCTGATAAGCATGGTGATCTTTGTGAGGTGAGCCTCACTGACAGCGTGGAGCA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG018079]] |
Revision as of 06:10, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT050896 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
739 nt |
| Genomic location |
chr15+:100331332..100333052 |
| Exon number |
4 |
| Exons |
100331332..100331420,100331767..100331850,100332401..100332929,100333016..100333052 |
| Genome context |
|
| Sequence |
000001 CGTGGCCCCA ACCCCGCCTC CCTCCCCACC CCGCAATGGC AGAAGAAACT CAACAGAGCA AATTGGCCGC AGCAAAGAAA 000080
000081 AAGGCAAAGG AGGACATCTG GACAGTGAGG AGGAGGCACC TCGGCCCATG CCAAGCAACC CAGAGGACCT GGAGAGCTGG 000160 000161 GAGGCCACGG TGAAGTGGCC TTATGGACCT CCTGGAGGAG AAGGTGGACC TGAGGGAGCG AGCGGAGAAA CTAGAACTTC 000240 000241 GATTCATCCA GTACTGGAAA GACAGAAGTC ATCAGTTAGT GGGAGGCCAG GGCACGGCAG GGGGAGCTGC AGGGCCGTCG 000320 000321 GAGGGACCTC AGCGTCTGAG CCCTGTCCTC CTGCAGGAAA GTTCATCACC CTAGAACACA GCCAGGGGGC AGTGCCAAAG 000400 000401 ATGCGGCAAC TGGAGGAGGA CATCATCAGG CTGGCCCAGG ACATGGAGGA GATGAAGGTA GGGTGTGCAA CATCTCTGCA 000480 000481 ggggtggggg tgggcgtgag ggtgggCGCC GGTAGATGCA TAACAGCTGA GCACCCCTCC CTCCAGGTGA AGCTGCTGGA 000560 000561 GCTGCTGGAG AAGATGTTGC GGCTTGTGGT GACTACAACG AGGGACACAG CAAATTCCCG GCCACTGCCC TGAAGCTTGC 000640 000641 TGATGAGCCT GGTCCAGGAG CCCCAGCCCC CCAGGAGCTT GTGGGTGCTG ATAAGCATGG TGATCTTTGT GAGGTGAGCC 000720 000721 TCACTGACAG CGTGGAGCA |
Predicted Small Protein
| Name | NONHSAT050896_smProtein_182:373 |
| Length | 64 |
| Molecular weight | 6962.7273 |
| Aromaticity | 0.047619047619 |
| Instability index | 62.4396825397 |
| Isoelectric point | 5.24285888672 |
| Runs | 9 |
| Runs residual | 0.00210560414642 |
| Runs probability | 0.00835148874363 |
| Amino acid sequence | MDLLEEKVDLRERAEKLELRFIQYWKDRSHQLVGGQGTAGGAAGPSEGPQRLSPVLLQES SSP |
| Secondary structure | LLHHHHLLLHHHHHHHHHHHHHHHHHHLLLLEELLLLLLLLLLLLLLLLLLLLLLEEEEL LLL |
| PRMN | - |
| PiMo | - |
