Difference between revisions of "NONHSAT051833"
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==Annotated Information==
===Transcriptomic Nomeclature===
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Revision as of 06:18, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT051833 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
antisense,sense |
| Length |
955 nt |
| Genomic location |
chr16-:732074..733106 |
| Exon number |
2 |
| Exons |
732074..732874,732953..733106 |
| Genome context |
|
| Sequence |
000001 CTGCTGCTCA TGCCCCCAGC GCTGGTTCCT TTACCCACCT GAGAAGACGC CAGAGTTCCA CCCCAACAAG ACCACGCTGG 000080
000081 CCTGGCTCCG GGACACATAC CCAGCCCTGC CACCGTCTGC ACGGCCCCTG GAGTGTACCA TCCGGGCTGG TGAGGTGCTG 000160 000161 TACTTCCCCG ACCGCTGGTG GCATGCTACG CTCAACCTTG ACACCAGCGT CTTCATCTCC ACCTTCCTCG GCTAGCCAAA 000240 000241 ACAGCTGGCA GGACTGCCGG TCACACACCA GCACGTCCCA CCTCGTGCTC ACGGATTTTA TTACACAGAT AGTGGCGGCA 000320 000321 ATGGCCTCAG CCCAGCCCAC CCTCACCTGC TTTTCCAGCC CACAAAGGGG GACGATCACG GCCCAGCAAA AGCGATGCTG 000400 000401 AGAGGGGAAA CAGTCCAGAG TCCAACAGCA GAACTTGGGG GAAGCGGTCG GGGTGGCCAG GAACATAAAC TATGTATAGG 000480 000481 GGCCGGGGGC TTCTGCCCAG GGCTCCCCTG GACCAGGACG CCAGGTAGGG CAGGGAACCT CAGTAGTCCT CCACCCAGCC 000560 000561 ATTCTCAGAG ATGAATGCGT CAATAACCTC CTTCATAGCC AAGTTGGGGA TGAGCTGTTC CTGGGTCAGG GGGCTCCGGG 000640 000641 TCACGGGGTC AAAATGACCC ACACGCTGCA GTGACAAGAA GGGCAGAGGG CAGTCATGGG GCCCAGGACC ATGCCACTGG 000720 000721 CCCTGCTCCC CCAGCCGCAG GCCTCACCTG CAGGTGCTCC TCGATGTCCT TGCGGTCGTA GGTGATGCCA CTGGGCGTGA 000800 000801 TGCACGGCTC CCGCATCAGC TCAAAGCTGA TCTTGCCACA CAGGTAGTCG GGGATGTCTC GCTTCTGTGG CACAGGGGCA 000880 000881 CACGGTCAGA GGCTGAAAAG GGGCACTGCA CGAGCACCTG CCAGCCATCG GCAGCAAGCG ACACACACTC ACCTT |
Predicted Small Protein
| Name | NONHSAT051833_smProtein_182:400 |
| Length | 73 |
| Molecular weight | 7712.5856 |
| Aromaticity | 0.0416666666667 |
| Instability index | 68.6097222222 |
| Isoelectric point | 9.21282958984 |
| Runs | 10 |
| Runs residual | 0.00202757502028 |
| Runs probability | 0.0291291291291 |
| Amino acid sequence | MLRSTLTPASSSPPSSASQNSWQDCRSHTSTSHLVLTDFITQIVAAMASAQPTLTCFSSP QRGTITAQQKRC |
| Secondary structure | LLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLEEHHHHHHHHHHHHHHLLLLEEEELLL LLLEEEEEEEEL |
| PRMN | - |
| PiMo | - |
