Difference between revisions of "NONHSAT075729"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>AACAATGTTACAGCTTTCAAGCTCAGAAATTGCTGGCACATATATACTTTCATAACCAGGGTAGGTAAGTTCCAACATAAAATGATCACATGGTAATTTTTCAGAGAAATGGAAATGTAAAGGAGAAGGCCTGCCAGTTCCTACGAATGAGAAATGATCTTCCACCATCACTAAGCACACTTACGGTTAACATCGCGAACATCAGCTGACACACGTTGAAGCTCCATGAACATCCGGAGAGCAGCTGTGATCATGGCATCAACGTCGAGAGAAAAGTCATCAAAATGAATGTCATCGATGGCAAGTTCTGACACCAGAGGGATGTTGGCTGCCTAGAAAAGCAAAAGACATAAGTCAAGCCAAGTTCACCAGCTTTCCCAAACCCCCATCCTGCTCTCCTCCCCTGCTTATCAGAAGTGCCACATAAATCAGGCCTGACCTGCACTTACACCCTGA</dnaseq>| | sequence = <dnaseq>AACAATGTTACAGCTTTCAAGCTCAGAAATTGCTGGCACATATATACTTTCATAACCAGGGTAGGTAAGTTCCAACATAAAATGATCACATGGTAATTTTTCAGAGAAATGGAAATGTAAAGGAGAAGGCCTGCCAGTTCCTACGAATGAGAAATGATCTTCCACCATCACTAAGCACACTTACGGTTAACATCGCGAACATCAGCTGACACACGTTGAAGCTCCATGAACATCCGGAGAGCAGCTGTGATCATGGCATCAACGTCGAGAGAAAAGTCATCAAAATGAATGTCATCGATGGCAAGTTCTGACACCAGAGGGATGTTGGCTGCCTAGAAAAGCAAAAGACATAAGTCAAGCCAAGTTCACCAGCTTTCCCAAACCCCCATCCTGCTCTCCTCCCCTGCTTATCAGAAGTGCCACATAAATCAGGCCTGACCTGCACTTACACCCTGA</dnaseq>| | ||
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− | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:NONHSAG029944]] |
Revision as of 06:19, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075729 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
456 nt |
Genomic location |
chr2+:178592202..178593024 |
Exon number |
2 |
Exons |
178592202..178592422,178592790..178593024 |
Genome context |
|
Sequence |
000001 AACAATGTTA CAGCTTTCAA GCTCAGAAAT TGCTGGCACA TATATACTTT CATAACCAGG GTAGGTAAGT TCCAACATAA 000080
000081 AATGATCACA TGGTAATTTT TCAGAGAAAT GGAAATGTAA AGGAGAAGGC CTGCCAGTTC CTACGAATGA GAAATGATCT 000160 000161 TCCACCATCA CTAAGCACAC TTACGGTTAA CATCGCGAAC ATCAGCTGAC ACACGTTGAA GCTCCATGAA CATCCGGAGA 000240 000241 GCAGCTGTGA TCATGGCATC AACGTCGAGA GAAAAGTCAT CAAAATGAAT GTCATCGATG GCAAGTTCTG ACACCAGAGG 000320 000321 GATGTTGGCT GCCTAGAAAA GCAAAAGACA TAAGTCAAGC CAAGTTCACC AGCTTTCCCA AACCCCCATC CTGCTCTCCT 000400 000401 CCCCTGCTTA TCAGAAGTGC CACATAAATC AGGCCTGACC TGCACTTACA CCCTGA |
Predicted Small Protein
Name | NONHSAT075729_smProtein_89:208 |
Length | 40 |
Molecular weight | 4420.1457 |
Aromaticity | 0.0512820512821 |
Instability index | 57.0564102564 |
Isoelectric point | 10.0442504883 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0306482953542 |
Amino acid sequence | MVIFQRNGNVKEKACQFLRMRNDLPPSLSTLTVNIANIS |
Secondary structure | LEEEELLLLHHHHHHHHHHHHLLLLLLLLEEEEEEEELL |
PRMN | - |
PiMo | - |