Difference between revisions of "NONHSAT120012"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TTTTCTTTTGCTGGTGTAGCTCGTCCGGTTACCTTCAGGAAGATTGGATAACCAAGAAATGACTAATCAAGAGTCTGCCGTACATGTGAAAATGTGTAGCAGAAACCAGCCTTCTTCGAAGTGGTCTTGGTGTGATTCTCCTATCCGTTATCAAAAACTTGAAGCTGTGATTTGCCTGAGGTAAGACATCTTGGGTACACTGAAATCAAATATTTAATTTTTTTGGTGAAAAAATAGTCTATGATATATATCCTGTGTTGCTTTCACCATAATGGATTGGTTATTGAATCAAACATATGCTGATTGCTGTGCATCTGCCAGTTAAGGCTGAGGTAAGAACAGAAATTAGTTGTCAAGAGATAAACTTACTAGCTGAGGTATTTGTAAGGGAGTTACAGAAGTGATATTCCAAAACAGCAGTGGTCCCTAAAACTCAGCAGAAAAGCAGAGTAAATACTACtcatcatcatatccctagcatttagcaagagtgtgtggcacaaagtagacacatggtaaatattggttaggcgagtgaatGGGTTAATGTATGAAAAAAAAAAATAGGAACCAGTGCC</dnaseq>| | sequence = <dnaseq>TTTTCTTTTGCTGGTGTAGCTCGTCCGGTTACCTTCAGGAAGATTGGATAACCAAGAAATGACTAATCAAGAGTCTGCCGTACATGTGAAAATGTGTAGCAGAAACCAGCCTTCTTCGAAGTGGTCTTGGTGTGATTCTCCTATCCGTTATCAAAAACTTGAAGCTGTGATTTGCCTGAGGTAAGACATCTTGGGTACACTGAAATCAAATATTTAATTTTTTTGGTGAAAAAATAGTCTATGATATATATCCTGTGTTGCTTTCACCATAATGGATTGGTTATTGAATCAAACATATGCTGATTGCTGTGCATCTGCCAGTTAAGGCTGAGGTAAGAACAGAAATTAGTTGTCAAGAGATAAACTTACTAGCTGAGGTATTTGTAAGGGAGTTACAGAAGTGATATTCCAAAACAGCAGTGGTCCCTAAAACTCAGCAGAAAAGCAGAGTAAATACTACtcatcatcatatccctagcatttagcaagagtgtgtggcacaaagtagacacatggtaaatattggttaggcgagtgaatGGGTTAATGTATGAAAAAAAAAAATAGGAACCAGTGCC</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG047299]] |
Revision as of 06:28, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT120012 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
578 nt |
| Genomic location |
chr7-:33068843..33080522 |
| Exon number |
3 |
| Exons |
33068843..33069326,33075546..33075600,33080484..33080522 |
| Genome context |
|
| Sequence |
000001 TTTTCTTTTG CTGGTGTAGC TCGTCCGGTT ACCTTCAGGA AGATTGGATA ACCAAGAAAT GACTAATCAA GAGTCTGCCG 000080
000081 TACATGTGAA AATGTGTAGC AGAAACCAGC CTTCTTCGAA GTGGTCTTGG TGTGATTCTC CTATCCGTTA TCAAAAACTT 000160 000161 GAAGCTGTGA TTTGCCTGAG GTAAGACATC TTGGGTACAC TGAAATCAAA TATTTAATTT TTTTGGTGAA AAAATAGTCT 000240 000241 ATGATATATA TCCTGTGTTG CTTTCACCAT AATGGATTGG TTATTGAATC AAACATATGC TGATTGCTGT GCATCTGCCA 000320 000321 GTTAAGGCTG AGGTAAGAAC AGAAATTAGT TGTCAAGAGA TAAACTTACT AGCTGAGGTA TTTGTAAGGG AGTTACAGAA 000400 000401 GTGATATTCC AAAACAGCAG TGGTCCCTAA AACTCAGCAG AAAAGCAGAG TAAATACTAC tcatcatcat atccctagca 000480 000481 tttagcaaga gtgtgtggca caaagtagac acatggtaaa tattggttag gcgagtgaat GGGTTAATGT ATGAAAAAAA 000560 000561 AAAATAGGAA CCAGTGCC |
Predicted Small Protein
| Name | NONHSAT120012_smProtein_296:403 |
| Length | 36 |
| Molecular weight | 4020.7602 |
| Aromaticity | 0.0285714285714 |
| Instability index | 58.3828571429 |
| Isoelectric point | 5.60491943359 |
| Runs | 7 |
| Runs residual | 0.0188861985472 |
| Runs probability | 0.0429000429002 |
| Amino acid sequence | MLIAVHLPVKAEVRTEISCQEINLLAEVFVRELQK |
| Secondary structure | LEEEEELLLLLEEEEEELHHHHHHHHHHHHHHHHL |
| PRMN | - |
| PiMo | - |
