Difference between revisions of "NONHSAT076450"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGCAGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTGTCAGGGAGGCAGAGGCCGGAGGATAGCTTGAGCCCAGGAGTTTGAGACCTGCCTGGGCAATATAGCGAGACCCCGTTCTCCACAAAAAAAAAAAAGACAAAACAAAAAAATTCGTGGTTGGTTGAATCTATGGATACAAAACCCATCCATAGATACCGAGAGCTGACTATAAACATGAGTTCAGGCTGATATAAATACATTAATGAATAAAAATTATTATTTTATTTTATTTTATTTTATTTTATTTTTTGAGACTAGGTCTTACTCTGTCACCCAGGTGGCACAATCTCAGCTCACTGCAACCTCAGCCTCCTGGGCTCAAGTAATTCTCCAGCCTCCTGTGTAGCCAGGACTACAGGCACAAGCCACCAATGCCCAGCTAATTTTTGTACTTTTTAAAATAGAGGCAGGGGTCTCGCCATGTTGCCCAGGCTGGTGAAACCCCTTCTCTACTAAAAACATAAAAAAATAGCCTGTGTGATGCATGCCTGCAGTCCCAGCTACTTCAGAGGCTGAGGCAAGAGGACTGTTTGAGCCCCGGAGGTGGAGGTTGCAATGAGCTGAGATCAGGCCACTGCACTCCAGCCTGGGTGACAGAACAAGACCTTGTCTGAATTTTAAAATAATAACAGTAATAATGTCTGTAAATACTCCCTTTTCCAGGAAATGAACTTAATTCCCTCCCAATTCCCTTTCTACCTTTTTG</dnaseq>| | sequence = <dnaseq>GGCAGGGCGCGGTGGCTCACGCCTGTAATCCCAGCTGTCAGGGAGGCAGAGGCCGGAGGATAGCTTGAGCCCAGGAGTTTGAGACCTGCCTGGGCAATATAGCGAGACCCCGTTCTCCACAAAAAAAAAAAAGACAAAACAAAAAAATTCGTGGTTGGTTGAATCTATGGATACAAAACCCATCCATAGATACCGAGAGCTGACTATAAACATGAGTTCAGGCTGATATAAATACATTAATGAATAAAAATTATTATTTTATTTTATTTTATTTTATTTTATTTTTTGAGACTAGGTCTTACTCTGTCACCCAGGTGGCACAATCTCAGCTCACTGCAACCTCAGCCTCCTGGGCTCAAGTAATTCTCCAGCCTCCTGTGTAGCCAGGACTACAGGCACAAGCCACCAATGCCCAGCTAATTTTTGTACTTTTTAAAATAGAGGCAGGGGTCTCGCCATGTTGCCCAGGCTGGTGAAACCCCTTCTCTACTAAAAACATAAAAAAATAGCCTGTGTGATGCATGCCTGCAGTCCCAGCTACTTCAGAGGCTGAGGCAAGAGGACTGTTTGAGCCCCGGAGGTGGAGGTTGCAATGAGCTGAGATCAGGCCACTGCACTCCAGCCTGGGTGACAGAACAAGACCTTGTCTGAATTTTAAAATAATAACAGTAATAATGTCTGTAAATACTCCCTTTTCCAGGAAATGAACTTAATTCCCTCCCAATTCCCTTTCTACCTTTTTG</dnaseq>| | ||
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− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG030274]] |
Revision as of 06:37, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076450 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
743 nt |
Genomic location |
chr2-:203194362..203202527 |
Exon number |
4 |
Exons |
203194362..203194632,203195215..203195540,203202375..203202395,203202403..203202527 |
Genome context |
|
Sequence |
000001 GGCAGGGCGC GGTGGCTCAC GCCTGTAATC CCAGCTGTCA GGGAGGCAGA GGCCGGAGGA TAGCTTGAGC CCAGGAGTTT 000080
000081 GAGACCTGCC TGGGCAATAT AGCGAGACCC CGTTCTCCAC AAAAAAAAAA AAGACAAAAC AAAAAAATTC GTGGTTGGTT 000160 000161 GAATCTATGG ATACAAAACC CATCCATAGA TACCGAGAGC TGACTATAAA CATGAGTTCA GGCTGATATA AATACATTAA 000240 000241 TGAATAAAAA TTATTATTTT ATTTTATTTT ATTTTATTTT ATTTTTTGAG ACTAGGTCTT ACTCTGTCAC CCAGGTGGCA 000320 000321 CAATCTCAGC TCACTGCAAC CTCAGCCTCC TGGGCTCAAG TAATTCTCCA GCCTCCTGTG TAGCCAGGAC TACAGGCACA 000400 000401 AGCCACCAAT GCCCAGCTAA TTTTTGTACT TTTTAAAATA GAGGCAGGGG TCTCGCCATG TTGCCCAGGC TGGTGAAACC 000480 000481 CCTTCTCTAC TAAAAACATA AAAAAATAGC CTGTGTGATG CATGCCTGCA GTCCCAGCTA CTTCAGAGGC TGAGGCAAGA 000560 000561 GGACTGTTTG AGCCCCGGAG GTGGAGGTTG CAATGAGCTG AGATCAGGCC ACTGCACTCC AGCCTGGGTG ACAGAACAAG 000640 000641 ACCTTGTCTG AATTTTAAAA TAATAACAGT AATAATGTCT GTAAATACTC CCTTTTCCAG GAAATGAACT TAATTCCCTC 000720 000721 CCAATTCCCT TTCTACCTTT TTG |
Predicted Small Protein
Name | NONHSAT076450_smProtein_239:382 |
Length | 48 |
Molecular weight | 5513.2775 |
Aromaticity | 0.212765957447 |
Instability index | 68.8895744681 |
Isoelectric point | 8.13848876953 |
Runs | 8 |
Runs residual | 0.00393617021277 |
Runs probability | 0.0198838544427 |
Amino acid sequence | MNKNYYFILFYFILFFETRSYSVTQVAQSQLTATSASWAQVILQPPV |
Secondary structure | LLLEEEEEEEEEEEEEELLEEEHHHHHHHHHHHHLHHHHHHHHLLLL |
PRMN | - |
PiMo | - |