Difference between revisions of "Lnc-ONECUT1-1:4"

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sequence = <dnaseq>TTCAAATGCAAGTTGCATCCCCAAATGCGAGGCTGGCCTGACCAAAAAGAGCCAGTCGGCGCCCGGAAGAGGCGAGACTCGCGCTTGGGTTCTCAATCCTTCTCTTTTCTCCTTTCTTTTTCCCTTTCTCCTCTCCGGTTCCTGATTTAGCTGGGAGCTGTTTATTTATGGCTGCAAATGTGTGTGTTCAAGAGAGAGAGGGAATTGATCTTTGCCTGGACTTAAAGATGGAGCCGAAGAAGCTGGAGGGAATTTGGGCTTGTGCGTCTGGCCCAGACCCTGTGCGCCGAGCCCGAGGTCTATCCTCCCCGCACCTCTCACCTCGCGACCTTGCAGGAATCCGCGGGCCCGGATGCTGCCCAGCTGACCCTCCTGCCCCGGGCCTGGCTGCAGAGAAAGTCTTCGGGCAGGAGGCCATCCTGTTCCTGTCTTTAAAATGAGCACAATAAAAGGGGGCAAATCCTCGAACGCGAACCTGATCTCATGTCACAGAAGCAACTTGCCATGAAATCCGCTAATGCGCTGCGACTCGCCCACCAGGGCAGCGTGCGGCGGCCGAACTGCACCTGCGTTTGTGAGCCTTGTAGAAATGGAGCCCACCGGATTCCCTCACCCGGAGAAATGCCCAAACTGAAACTTGACTACACTTCCCTGGGCTGGTTCACGGTTTCATAATCTCCCAGGTTTGCTGGCTGTGTCACCAAATCCAAGCCAAACCTGCTATAAACATGATCACAGGCCACTGACCTCGCAGCACTGACCGATAACTCGGTGGCAAAATCAGCTCCTCTGGTCAGAGGTTATTAAAGCAGCGGCTGAATTCGTGTTTGTTTTTTTGAAGTGGTCAGAAAAACGTAGTCTTCTTAAACCTACAAAAACAGTCAAACACATTTGCAAATGTGCTTTACTTGTATTGGTTCGAGTGCTGGAAGCTGTCTGGCGGTGAGCTTTTTCGTTGCGTGTGGTTTATGCAGAGCACCCGGGATGTTTTTCTCGTCTTTTACGTCTTGGTATCTTTTAAAAATGTAGAATGTGTCTCTGATTGTTTCACAGTATGTTCCTTAACAACCAGATATGTAAGAAAACGTTTGGGATTGAGTGGTGAGAAAAGCAGACTGGAAAGTACAAATAAACCCAATCCAAATGGAAAACAAATTAAACAGATGAAATGATTATGAAAG</dnaseq>|
 
sequence = <dnaseq>TTCAAATGCAAGTTGCATCCCCAAATGCGAGGCTGGCCTGACCAAAAAGAGCCAGTCGGCGCCCGGAAGAGGCGAGACTCGCGCTTGGGTTCTCAATCCTTCTCTTTTCTCCTTTCTTTTTCCCTTTCTCCTCTCCGGTTCCTGATTTAGCTGGGAGCTGTTTATTTATGGCTGCAAATGTGTGTGTTCAAGAGAGAGAGGGAATTGATCTTTGCCTGGACTTAAAGATGGAGCCGAAGAAGCTGGAGGGAATTTGGGCTTGTGCGTCTGGCCCAGACCCTGTGCGCCGAGCCCGAGGTCTATCCTCCCCGCACCTCTCACCTCGCGACCTTGCAGGAATCCGCGGGCCCGGATGCTGCCCAGCTGACCCTCCTGCCCCGGGCCTGGCTGCAGAGAAAGTCTTCGGGCAGGAGGCCATCCTGTTCCTGTCTTTAAAATGAGCACAATAAAAGGGGGCAAATCCTCGAACGCGAACCTGATCTCATGTCACAGAAGCAACTTGCCATGAAATCCGCTAATGCGCTGCGACTCGCCCACCAGGGCAGCGTGCGGCGGCCGAACTGCACCTGCGTTTGTGAGCCTTGTAGAAATGGAGCCCACCGGATTCCCTCACCCGGAGAAATGCCCAAACTGAAACTTGACTACACTTCCCTGGGCTGGTTCACGGTTTCATAATCTCCCAGGTTTGCTGGCTGTGTCACCAAATCCAAGCCAAACCTGCTATAAACATGATCACAGGCCACTGACCTCGCAGCACTGACCGATAACTCGGTGGCAAAATCAGCTCCTCTGGTCAGAGGTTATTAAAGCAGCGGCTGAATTCGTGTTTGTTTTTTTGAAGTGGTCAGAAAAACGTAGTCTTCTTAAACCTACAAAAACAGTCAAACACATTTGCAAATGTGCTTTACTTGTATTGGTTCGAGTGCTGGAAGCTGTCTGGCGGTGAGCTTTTTCGTTGCGTGTGGTTTATGCAGAGCACCCGGGATGTTTTTCTCGTCTTTTACGTCTTGGTATCTTTTAAAAATGTAGAATGTGTCTCTGATTGTTTCACAGTATGTTCCTTAACAACCAGATATGTAAGAAAACGTTTGGGATTGAGTGGTGAGAAAAGCAGACTGGAAAGTACAAATAAACCCAATCCAAATGGAAAACAAATTAAACAGATGAAATGATTATGAAAG</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-ONECUT1-1]]

Revision as of 06:44, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-ONECUT1-1:4

Source

LNCipedia2.1

Same with

NONHSAT043954

Classification

intergenic

Length

1181 nt

Genomic location

chr15-:53095405..53097142

Exon number

3

Exons

53095405..53096044,53096406..53096494,53096691..53097142

Genome context

Sequence
000001 TTCAAATGCA AGTTGCATCC CCAAATGCGA GGCTGGCCTG ACCAAAAAGA GCCAGTCGGC GCCCGGAAGA GGCGAGACTC 000080
000081 GCGCTTGGGT TCTCAATCCT TCTCTTTTCT CCTTTCTTTT TCCCTTTCTC CTCTCCGGTT CCTGATTTAG CTGGGAGCTG 000160
000161 TTTATTTATG GCTGCAAATG TGTGTGTTCA AGAGAGAGAG GGAATTGATC TTTGCCTGGA CTTAAAGATG GAGCCGAAGA 000240
000241 AGCTGGAGGG AATTTGGGCT TGTGCGTCTG GCCCAGACCC TGTGCGCCGA GCCCGAGGTC TATCCTCCCC GCACCTCTCA 000320
000321 CCTCGCGACC TTGCAGGAAT CCGCGGGCCC GGATGCTGCC CAGCTGACCC TCCTGCCCCG GGCCTGGCTG CAGAGAAAGT 000400
000401 CTTCGGGCAG GAGGCCATCC TGTTCCTGTC TTTAAAATGA GCACAATAAA AGGGGGCAAA TCCTCGAACG CGAACCTGAT 000480
000481 CTCATGTCAC AGAAGCAACT TGCCATGAAA TCCGCTAATG CGCTGCGACT CGCCCACCAG GGCAGCGTGC GGCGGCCGAA 000560
000561 CTGCACCTGC GTTTGTGAGC CTTGTAGAAA TGGAGCCCAC CGGATTCCCT CACCCGGAGA AATGCCCAAA CTGAAACTTG 000640
000641 ACTACACTTC CCTGGGCTGG TTCACGGTTT CATAATCTCC CAGGTTTGCT GGCTGTGTCA CCAAATCCAA GCCAAACCTG 000720
000721 CTATAAACAT GATCACAGGC CACTGACCTC GCAGCACTGA CCGATAACTC GGTGGCAAAA TCAGCTCCTC TGGTCAGAGG 000800
000801 TTATTAAAGC AGCGGCTGAA TTCGTGTTTG TTTTTTTGAA GTGGTCAGAA AAACGTAGTC TTCTTAAACC TACAAAAACA 000880
000881 GTCAAACACA TTTGCAAATG TGCTTTACTT GTATTGGTTC GAGTGCTGGA AGCTGTCTGG CGGTGAGCTT TTTCGTTGCG 000960
000961 TGTGGTTTAT GCAGAGCACC CGGGATGTTT TTCTCGTCTT TTACGTCTTG GTATCTTTTA AAAATGTAGA ATGTGTCTCT 001040
001041 GATTGTTTCA CAGTATGTTC CTTAACAACC AGATATGTAA GAAAACGTTT GGGATTGAGT GGTGAGAAAA GCAGACTGGA 001120
001121 AAGTACAAAT AAACCCAATC CAAATGGAAA ACAAATTAAA CAGATGAAAT GATTATGAAA G
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