Difference between revisions of "ENST00000461448.1"

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sequence = <dnaseq>TTACTAGCTGCAAGCCTCTGCCTGCCTTCCTGCGCGCCGTTCCCCGCTAGTCGCTGCTGCTGGCGCGCACTCGCCGGGTTTTTCCTCCCACGGCCTCGAGATGGTGGTGAATGTGGCACGGAGGAGCCGGGCCTTCCAACCCGGTGGGCCCGAGCTCCGAAAGGCCCCCTCGGCAGTGAGAGGGGCGGGAGCCCGCGGGGGCCGCGCCCTTCTCTCGCTTCGGACTGCGCAACGCTGCGCTCTGGGCTGACAGGCGGATAAAACGGTCCCATCAAGACTGAGAAAAAGCACACCAGCTATTGGCACAGCGTGGGCAGTGGGGCCTACAGGATGACTGACTTAGTCTACAGAGATCCCGGCGTACTTAAGCAGATGAAGACTCTTAAGATGACAGAAGGTGATTTTTCTGGTGATCGAGGACTTCCGGGGTAATGACAGTGATGAAATGCAGGGGACCTGGTAGGTTTCTTTTGGAGACTAACTGGGGGCTGCCTGGTGGGACAGAACAGCATGTTTCCAAGGGCTGTGGCTGGTCATAGCCATGGGATCTCCAACTGCATGCAAGAGCAACCTGGAAAGACTTTGACAGCGCAGGTCAGTACAATACCTGCAAGCTGCCACTCAGCTTTCCTATAATGTTTCAGGACCAGGGCTGGAAGCCTTCCATGTGTCAACTTCAATGTAGATGGGTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGCTGGAGTGCAGTGGCATGATCTCGGCTCATGGCAACCTCTGCCTCCTGGGTTCAAGCGACTCTCCTACCTCATCCTCCCGAGTAGCTGGGATTACAGGTGCCCACCATCACACCCAGCTAATTTTCTTGTATTTTTAGTAGAGATGGTTTTCACCATGTTGGCTAGATGGGTCTCGAACTTCTGACCTCGGGTGATCCGCCCGACTCGGCCTCCCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCTCCTGGCCAGTTTAGTTTTCACGCTAAGCTTTTTGTTCTGCAGGTTGCCCCCAAGTTTCCTGGCAGTGTGTGATACTGAGGAGGTGAGCTTGTTTCTGGAGCTGTGCTTTAAGGTAAAGTTGATCAGCTTAATCCTCCTGATCCCTTTCCCATCGGATCTGAACACTGGTCTTGGTGGTCGTAAAAGGAGGAAAAGTAATAGTGAAGCTGGCCTAAATGTTGTAATCTGGTATATGGCATGTGGGCTAGTTTCAGACAGGTTTCAGAGATGGTTGGATCTCTGAAATTGTAAAATGAAGTATAATCTTAGGCTAAGGGAAGGATGCGTGTGAAGCTCTGGAGGTTGGTATAGTAATAGCTGACCTATTACTGCATTTGGGAGGGATCTGTCATAGCTTCCTTGCCTCTTAATTAAGGGTGGTGTTTTTTTCTTTTAGATTCATGTTACATGTAAAGCTGTCCTCATTTGTGACTATGGACCTATGGAGTTGGGACAATCTCTATGGGAAGCAGAAGGCAAGGACCCCGGTCATTTTAGGTAGAAACAACAGCATGCTAATGCAAAAAATTATGCAGTGTGCTACTGAACTTCAGAGGTGATCAATAAAAGAAGAATAAAAAGACTAATAAAAGTA</dnaseq>|
 
sequence = <dnaseq>TTACTAGCTGCAAGCCTCTGCCTGCCTTCCTGCGCGCCGTTCCCCGCTAGTCGCTGCTGCTGGCGCGCACTCGCCGGGTTTTTCCTCCCACGGCCTCGAGATGGTGGTGAATGTGGCACGGAGGAGCCGGGCCTTCCAACCCGGTGGGCCCGAGCTCCGAAAGGCCCCCTCGGCAGTGAGAGGGGCGGGAGCCCGCGGGGGCCGCGCCCTTCTCTCGCTTCGGACTGCGCAACGCTGCGCTCTGGGCTGACAGGCGGATAAAACGGTCCCATCAAGACTGAGAAAAAGCACACCAGCTATTGGCACAGCGTGGGCAGTGGGGCCTACAGGATGACTGACTTAGTCTACAGAGATCCCGGCGTACTTAAGCAGATGAAGACTCTTAAGATGACAGAAGGTGATTTTTCTGGTGATCGAGGACTTCCGGGGTAATGACAGTGATGAAATGCAGGGGACCTGGTAGGTTTCTTTTGGAGACTAACTGGGGGCTGCCTGGTGGGACAGAACAGCATGTTTCCAAGGGCTGTGGCTGGTCATAGCCATGGGATCTCCAACTGCATGCAAGAGCAACCTGGAAAGACTTTGACAGCGCAGGTCAGTACAATACCTGCAAGCTGCCACTCAGCTTTCCTATAATGTTTCAGGACCAGGGCTGGAAGCCTTCCATGTGTCAACTTCAATGTAGATGGGTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGCTGGAGTGCAGTGGCATGATCTCGGCTCATGGCAACCTCTGCCTCCTGGGTTCAAGCGACTCTCCTACCTCATCCTCCCGAGTAGCTGGGATTACAGGTGCCCACCATCACACCCAGCTAATTTTCTTGTATTTTTAGTAGAGATGGTTTTCACCATGTTGGCTAGATGGGTCTCGAACTTCTGACCTCGGGTGATCCGCCCGACTCGGCCTCCCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCTCCTGGCCAGTTTAGTTTTCACGCTAAGCTTTTTGTTCTGCAGGTTGCCCCCAAGTTTCCTGGCAGTGTGTGATACTGAGGAGGTGAGCTTGTTTCTGGAGCTGTGCTTTAAGGTAAAGTTGATCAGCTTAATCCTCCTGATCCCTTTCCCATCGGATCTGAACACTGGTCTTGGTGGTCGTAAAAGGAGGAAAAGTAATAGTGAAGCTGGCCTAAATGTTGTAATCTGGTATATGGCATGTGGGCTAGTTTCAGACAGGTTTCAGAGATGGTTGGATCTCTGAAATTGTAAAATGAAGTATAATCTTAGGCTAAGGGAAGGATGCGTGTGAAGCTCTGGAGGTTGGTATAGTAATAGCTGACCTATTACTGCATTTGGGAGGGATCTGTCATAGCTTCCTTGCCTCTTAATTAAGGGTGGTGTTTTTTTCTTTTAGATTCATGTTACATGTAAAGCTGTCCTCATTTGTGACTATGGACCTATGGAGTTGGGACAATCTCTATGGGAAGCAGAAGGCAAGGACCCCGGTCATTTTAGGTAGAAACAACAGCATGCTAATGCAAAAAATTATGCAGTGTGCTACTGAACTTCAGAGGTGATCAATAAAAGAAGAATAAAAAGACTAATAAAAGTA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-TAF12-1]]
+
[[Category:Intergenic]][[Category:lnc-TAF12-1]][[Category:NONHSAG000840]]

Revision as of 06:46, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000461448.1

Source

Gencode19

Same with

lnc-TAF12-1:7,NONHSAT001968

Classification

intergenic

Length

1629 nt

Genomic location

chr1-:28905050..28908354

Exon number

4

Exons

28905050..28905192,28906045..28907158,28907623..28907741,28908102..28908354

Genome context

Sequence
000001 TTACTAGCTG CAAGCCTCTG CCTGCCTTCC TGCGCGCCGT TCCCCGCTAG TCGCTGCTGC TGGCGCGCAC TCGCCGGGTT 000080
000081 TTTCCTCCCA CGGCCTCGAG ATGGTGGTGA ATGTGGCACG GAGGAGCCGG GCCTTCCAAC CCGGTGGGCC CGAGCTCCGA 000160
000161 AAGGCCCCCT CGGCAGTGAG AGGGGCGGGA GCCCGCGGGG GCCGCGCCCT TCTCTCGCTT CGGACTGCGC AACGCTGCGC 000240
000241 TCTGGGCTGA CAGGCGGATA AAACGGTCCC ATCAAGACTG AGAAAAAGCA CACCAGCTAT TGGCACAGCG TGGGCAGTGG 000320
000321 GGCCTACAGG ATGACTGACT TAGTCTACAG AGATCCCGGC GTACTTAAGC AGATGAAGAC TCTTAAGATG ACAGAAGGTG 000400
000401 ATTTTTCTGG TGATCGAGGA CTTCCGGGGT AATGACAGTG ATGAAATGCA GGGGACCTGG TAGGTTTCTT TTGGAGACTA 000480
000481 ACTGGGGGCT GCCTGGTGGG ACAGAACAGC ATGTTTCCAA GGGCTGTGGC TGGTCATAGC CATGGGATCT CCAACTGCAT 000560
000561 GCAAGAGCAA CCTGGAAAGA CTTTGACAGC GCAGGTCAGT ACAATACCTG CAAGCTGCCA CTCAGCTTTC CTATAATGTT 000640
000641 TCAGGACCAG GGCTGGAAGC CTTCCATGTG TCAACTTCAA TGTAGATGGG TTTTTTTTTT TTTTTTTTTT TGAGACGGAG 000720
000721 TCTTGCTCTG TCACCCAGGC TGCTGGAGTG CAGTGGCATG ATCTCGGCTC ATGGCAACCT CTGCCTCCTG GGTTCAAGCG 000800
000801 ACTCTCCTAC CTCATCCTCC CGAGTAGCTG GGATTACAGG TGCCCACCAT CACACCCAGC TAATTTTCTT GTATTTTTAG 000880
000881 TAGAGATGGT TTTCACCATG TTGGCTAGAT GGGTCTCGAA CTTCTGACCT CGGGTGATCC GCCCGACTCG GCCTCCCCTT 000960
000961 CCAAAGTGCT GGGATTACAG GCATGAGCCA CCGCTCCTGG CCAGTTTAGT TTTCACGCTA AGCTTTTTGT TCTGCAGGTT 001040
001041 GCCCCCAAGT TTCCTGGCAG TGTGTGATAC TGAGGAGGTG AGCTTGTTTC TGGAGCTGTG CTTTAAGGTA AAGTTGATCA 001120
001121 GCTTAATCCT CCTGATCCCT TTCCCATCGG ATCTGAACAC TGGTCTTGGT GGTCGTAAAA GGAGGAAAAG TAATAGTGAA 001200
001201 GCTGGCCTAA ATGTTGTAAT CTGGTATATG GCATGTGGGC TAGTTTCAGA CAGGTTTCAG AGATGGTTGG ATCTCTGAAA 001280
001281 TTGTAAAATG AAGTATAATC TTAGGCTAAG GGAAGGATGC GTGTGAAGCT CTGGAGGTTG GTATAGTAAT AGCTGACCTA 001360
001361 TTACTGCATT TGGGAGGGAT CTGTCATAGC TTCCTTGCCT CTTAATTAAG GGTGGTGTTT TTTTCTTTTA GATTCATGTT 001440
001441 ACATGTAAAG CTGTCCTCAT TTGTGACTAT GGACCTATGG AGTTGGGACA ATCTCTATGG GAAGCAGAAG GCAAGGACCC 001520
001521 CGGTCATTTT AGGTAGAAAC AACAGCATGC TAATGCAAAA AATTATGCAG TGTGCTACTG AACTTCAGAG GTGATCAATA 001600
001601 AAAGAAGAAT AAAAAGACTA ATAAAAGTA
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