Difference between revisions of "NONHSAT026990"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
| Line 42: | Line 42: | ||
sequence = <dnaseq>CCGCCTAGTGAGAGGCGGTCCGATTTGGCCCTTGGGGAGTGTCCGTCGCGTTGATCTGATGGATTCACGTACACAACACCACATTCTATGAGATTTTGCAGGCAAAAGTCCACAAGCTCGATATATGGGACACCTGCACCGGCATTGGATTTGGCCCCGCAACATCTTAAAGGAAGCAGGCTGTGAGCCAAGGGGAAGGCAGAGGACAGAAATGAATGTGTTTCCAGGCTTTCCTGGTGGTTTATGGCATTCTCCAAACTCCTATGCAAGGGCTATTCCTGACCAAGAAGATCTAAAGAGAACGTCTCTGAAATCAAGTCCGGATGAAGGTATGTGATAGGGATCCCTTGGTATTGCGACTGAAATTTGGCTCAGAGGACATAATGCCTTCTTTTTTTCCAGGCAATTTGGAGATTTTGTCCTGCCTTAGATGCTGGTTAGAGGCTTTAGGTTTGTTACCAGTCCAGAAAAGATGCCTAGGTAGTTCTGTAAAATGAAAATTCATCAGAGTATGTGTCAGTTGAAAAATTGGATGGAAATTGTGTATAGTGATAATTAATGAAACAAAGCACTCATTGATGAAAA</dnaseq>| | sequence = <dnaseq>CCGCCTAGTGAGAGGCGGTCCGATTTGGCCCTTGGGGAGTGTCCGTCGCGTTGATCTGATGGATTCACGTACACAACACCACATTCTATGAGATTTTGCAGGCAAAAGTCCACAAGCTCGATATATGGGACACCTGCACCGGCATTGGATTTGGCCCCGCAACATCTTAAAGGAAGCAGGCTGTGAGCCAAGGGGAAGGCAGAGGACAGAAATGAATGTGTTTCCAGGCTTTCCTGGTGGTTTATGGCATTCTCCAAACTCCTATGCAAGGGCTATTCCTGACCAAGAAGATCTAAAGAGAACGTCTCTGAAATCAAGTCCGGATGAAGGTATGTGATAGGGATCCCTTGGTATTGCGACTGAAATTTGGCTCAGAGGACATAATGCCTTCTTTTTTTCCAGGCAATTTGGAGATTTTGTCCTGCCTTAGATGCTGGTTAGAGGCTTTAGGTTTGTTACCAGTCCAGAAAAGATGCCTAGGTAGTTCTGTAAAATGAAAATTCATCAGAGTATGTGTCAGTTGAAAAATTGGATGGAAATTGTGTATAGTGATAATTAATGAAACAAAGCACTCATTGATGAAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG010531]] |
Revision as of 07:16, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT026990 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
585 nt |
| Genomic location |
chr12-:12837029..12849117 |
| Exon number |
3 |
| Exons |
12837029..12837441,12848393..12848445,12848999..12849117 |
| Genome context |
|
| Sequence |
000001 CCGCCTAGTG AGAGGCGGTC CGATTTGGCC CTTGGGGAGT GTCCGTCGCG TTGATCTGAT GGATTCACGT ACACAACACC 000080
000081 ACATTCTATG AGATTTTGCA GGCAAAAGTC CACAAGCTCG ATATATGGGA CACCTGCACC GGCATTGGAT TTGGCCCCGC 000160 000161 AACATCTTAA AGGAAGCAGG CTGTGAGCCA AGGGGAAGGC AGAGGACAGA AATGAATGTG TTTCCAGGCT TTCCTGGTGG 000240 000241 TTTATGGCAT TCTCCAAACT CCTATGCAAG GGCTATTCCT GACCAAGAAG ATCTAAAGAG AACGTCTCTG AAATCAAGTC 000320 000321 CGGATGAAGG TATGTGATAG GGATCCCTTG GTATTGCGAC TGAAATTTGG CTCAGAGGAC ATAATGCCTT CTTTTTTTCC 000400 000401 AGGCAATTTG GAGATTTTGT CCTGCCTTAG ATGCTGGTTA GAGGCTTTAG GTTTGTTACC AGTCCAGAAA AGATGCCTAG 000480 000481 GTAGTTCTGT AAAATGAAAA TTCATCAGAG TATGTGTCAG TTGAAAAATT GGATGGAAAT TGTGTATAGT GATAATTAAT 000560 000561 GAAACAAAGC ACTCATTGAT GAAAA |
Predicted Small Protein
| Name | NONHSAT026990_smProtein_323:496 |
| Length | 58 |
| Molecular weight | 6423.6814 |
| Aromaticity | 0.0701754385965 |
| Instability index | 76.3 |
| Isoelectric point | 8.47296142578 |
| Runs | 9 |
| Runs residual | 0.00394736842105 |
| Runs probability | 0.0458105163989 |
| Amino acid sequence | MKVCDRDPLVLRLKFGSEDIMPSFFPGNLEILSCLRCWLEALGLLPVQKRCLGSSVK |
| Secondary structure | LEELLLLLEEEEEELLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLHHHHHHLLLLL |
| PRMN | - |
| PiMo | - |
