Difference between revisions of "NONHSAT055266"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>atctaatctatggtgatggaagccagaggggtggttaccccctggggaatggagaggtgtgtttggactgaaaggggcaaaagaggaccttctggggaggtggaaatgctccatgtctagatctgggaggtggttatactggtttttataatgtatgtaaaaatcaccaagttgcacatttaagatctatgcattttactatatgtaaattatatcttaatttttctttcatttttttttttggagacagagtctggctttgttgcccaggctggagtatagtggtgcaatctcaatttacctaggctcaagtgatcctcccgcctcagccttctgagtagctgggactacaggtgtgtgtaccatgcctggctaatttctgttttttttgtttttgtttttgtttttggtagaggtgggtttttttcatgttgtccagactggtcttgaactcctgggctcaagttatcctcccggcccagcctcctaaTCTTTCAtttttttttttaagagacagggtttcactatgttgcccaggctggccttgaacttctgggctcaagtgaacctcctacctcatcctctcaagtacctgggactacaggtgtgtgccactgtactcagcTTTATAGCTTAACTTTTAAAAAGAAATATTGCTAAAGAGAAGAAAAAAAAGCAAGATTCAGACTAGTGTGCATAGTATGTGCATAAAAAAGTGGGAGAAAGAATATGAAGTCATGTTTGCTTAAACAACGACTGTAAGGATACCCTAGAATCCAAAGGAGACAGTCTACTTCGGTGGTGGATTTACCAGAAGGGGCCAGGGAGGGGAGAGGGAGGCATTTCACC</dnaseq>|
 
sequence = <dnaseq>atctaatctatggtgatggaagccagaggggtggttaccccctggggaatggagaggtgtgtttggactgaaaggggcaaaagaggaccttctggggaggtggaaatgctccatgtctagatctgggaggtggttatactggtttttataatgtatgtaaaaatcaccaagttgcacatttaagatctatgcattttactatatgtaaattatatcttaatttttctttcatttttttttttggagacagagtctggctttgttgcccaggctggagtatagtggtgcaatctcaatttacctaggctcaagtgatcctcccgcctcagccttctgagtagctgggactacaggtgtgtgtaccatgcctggctaatttctgttttttttgtttttgtttttgtttttggtagaggtgggtttttttcatgttgtccagactggtcttgaactcctgggctcaagttatcctcccggcccagcctcctaaTCTTTCAtttttttttttaagagacagggtttcactatgttgcccaggctggccttgaacttctgggctcaagtgaacctcctacctcatcctctcaagtacctgggactacaggtgtgtgccactgtactcagcTTTATAGCTTAACTTTTAAAAAGAAATATTGCTAAAGAGAAGAAAAAAAAGCAAGATTCAGACTAGTGTGCATAGTATGTGCATAAAAAAGTGGGAGAAAGAATATGAAGTCATGTTTGCTTAAACAACGACTGTAAGGATACCCTAGAATCCAAAGGAGACAGTCTACTTCGGTGGTGGATTTACCAGAAGGGGCCAGGGAGGGGAGAGGGAGGCATTTCACC</dnaseq>|
 
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[[Category:Intergenic]]
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[[Category:Intergenic]][[Category:NONHSAG022491]]

Revision as of 07:43, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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You can also add sub-section(s) at will.

Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT055266

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

849 nt

Genomic location

chr17+:62111002..62111850

Exon number

1

Exons

62111002..62111850

Genome context

Sequence
000001 atctaatcta tggtgatgga agccagaggg gtggttaccc cctggggaat ggagaggtgt gtttggactg aaaggggcaa 000080
000081 aagaggacct tctggggagg tggaaatgct ccatgtctag atctgggagg tggttatact ggtttttata atgtatgtaa 000160
000161 aaatcaccaa gttgcacatt taagatctat gcattttact atatgtaaat tatatcttaa tttttctttc attttttttt 000240
000241 ttggagacag agtctggctt tgttgcccag gctggagtat agtggtgcaa tctcaattta cctaggctca agtgatcctc 000320
000321 ccgcctcagc cttctgagta gctgggacta caggtgtgtg taccatgcct ggctaatttc tgtttttttt gtttttgttt 000400
000401 ttgtttttgg tagaggtggg tttttttcat gttgtccaga ctggtcttga actcctgggc tcaagttatc ctcccggccc 000480
000481 agcctcctaa TCTTTCAttt ttttttttaa gagacagggt ttcactatgt tgcccaggct ggccttgaac ttctgggctc 000560
000561 aagtgaacct cctacctcat cctctcaagt acctgggact acaggtgtgt gccactgtac tcagcTTTAT AGCTTAACTT 000640
000641 TTAAAAAGAA ATATTGCTAA AGAGAAGAAA AAAAAGCAAG ATTCAGACTA GTGTGCATAG TATGTGCATA AAAAAGTGGG 000720
000721 AGAAAGAATA TGAAGTCATG TTTGCTTAAA CAACGACTGT AAGGATACCC TAGAATCCAA AGGAGACAGT CTACTTCGGT 000800
000801 GGTGGATTTA CCAGAAGGGG CCAGGGAGGG GAGAGGGAGG CATTTCACC
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Predicted Small Protein

Name NONHSAT055266_smProtein_428:547
Length 40
Molecular weight 4473.2925
Aromaticity 0.128205128205
Instability index 44.6948717949
Isoelectric point 9.00592041016
Runs 8
Runs residual 0.0363876319759
Runs probability 0.036996555379
Amino acid sequence MLSRLVLNSWAQVILPAQPPNLSFFFLRDRVSLCCPGWP
Secondary structure LLLHHHHHHHHHHEELLLLLLLLEEEEELLEEELLLLLL
PRMN -
PiMo -