Difference between revisions of "NONHSAT122605"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
| Line 42: | Line 42: | ||
sequence = <dnaseq>GGCAATGGAAATGACAAAAAAGAGATGAATAAATCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATACAAAAGAATAAGAAAATTCTTAAATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAGAGAACAGTTTGAAGCAAATGGGTATTTCTTTAAAAGGTATATTCATTTATTTTCCCATGTTCATTTTCTGTAGGTAAATATTGAACTTTTGGCTGTTTTACCTAGATGTTGTGATTATATGTACTTTTTTTCCTACATGATCATTTCAGTATTTAAAGCTGTAGTGTGGTTGAACAGTGACTGATGATAATTTTTGAACTACGATAAACTAAAACAACATAAAAAAATGCAAAGATATATTCCGGTCTCTTGCTCATGTCTGTCTTGCTGAAAATCCTAAAACAATCTACTTCAAAGATTAACCAACAGCAATATAGGTTGGATATAGAAGGATATCAGTCAGGAATTCTGATTGATTGAGATTACAAGGAACCCTTTCCATCTGGGACTCATGATAATTCCTCATAACGT</dnaseq>| | sequence = <dnaseq>GGCAATGGAAATGACAAAAAAGAGATGAATAAATCCGATTTGAATACCAACAATTTGCTCTTCAAACCTCCTGTAGAGAGCCATATACAAAAGAATAAGAAAATTCTTAAATCTGCAAAAGATTTGCCTCCTGATGCACTTATCATTGAATACAGAGGGAAGTTTATGCTGAGAGAACAGTTTGAAGCAAATGGGTATTTCTTTAAAAGGTATATTCATTTATTTTCCCATGTTCATTTTCTGTAGGTAAATATTGAACTTTTGGCTGTTTTACCTAGATGTTGTGATTATATGTACTTTTTTTCCTACATGATCATTTCAGTATTTAAAGCTGTAGTGTGGTTGAACAGTGACTGATGATAATTTTTGAACTACGATAAACTAAAACAACATAAAAAAATGCAAAGATATATTCCGGTCTCTTGCTCATGTCTGTCTTGCTGAAAATCCTAAAACAATCTACTTCAAAGATTAACCAACAGCAATATAGGTTGGATATAGAAGGATATCAGTCAGGAATTCTGATTGATTGAGATTACAAGGAACCCTTTCCATCTGGGACTCATGATAATTCCTCATAACGT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG048470]] |
Revision as of 07:46, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT122605 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
584 nt |
| Genomic location |
chr7+:104717563..104718255 |
| Exon number |
2 |
| Exons |
104717563..104717640,104717750..104718255 |
| Genome context |
|
| Sequence |
000001 GGCAATGGAA ATGACAAAAA AGAGATGAAT AAATCCGATT TGAATACCAA CAATTTGCTC TTCAAACCTC CTGTAGAGAG 000080
000081 CCATATACAA AAGAATAAGA AAATTCTTAA ATCTGCAAAA GATTTGCCTC CTGATGCACT TATCATTGAA TACAGAGGGA 000160 000161 AGTTTATGCT GAGAGAACAG TTTGAAGCAA ATGGGTATTT CTTTAAAAGG TATATTCATT TATTTTCCCA TGTTCATTTT 000240 000241 CTGTAGGTAA ATATTGAACT TTTGGCTGTT TTACCTAGAT GTTGTGATTA TATGTACTTT TTTTCCTACA TGATCATTTC 000320 000321 AGTATTTAAA GCTGTAGTGT GGTTGAACAG TGACTGATGA TAATTTTTGA ACTACGATAA ACTAAAACAA CATAAAAAAA 000400 000401 TGCAAAGATA TATTCCGGTC TCTTGCTCAT GTCTGTCTTG CTGAAAATCC TAAAACAATC TACTTCAAAG ATTAACCAAC 000480 000481 AGCAATATAG GTTGGATATA GAAGGATATC AGTCAGGAAT TCTGATTGAT TGAGATTACA AGGAACCCTT TCCATCTGGG 000560 000561 ACTCATGATA ATTCCTCATA ACGT |
Predicted Small Protein
| Name | NONHSAT122605_smProtein_428:532 |
| Length | 35 |
| Molecular weight | 3924.5204 |
| Aromaticity | 0.0588235294118 |
| Instability index | 66.6205882353 |
| Isoelectric point | 8.13983154297 |
| Runs | 5 |
| Runs residual | 0.0390915860015 |
| Runs probability | 0.0231937820174 |
| Amino acid sequence | MSVLLKILKQSTSKINQQQYRLDIEGYQSGILID |
| Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHHHLLLLLEEEL |
| PRMN | - |
| PiMo | - |
