Difference between revisions of "NONHSAT055661"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGAAGAAGCCCGACATTTCTTATAGGAAATGGAACTCTTCATAAGTCTGGCCATGGAGGCATGGTATCCGTAACATCCCCCAAAGGAGCTAAAGAAGAAATCCACAATTTACCATGAGCATTTCTCGTCTGAAGATTGCCAAGCGATTCCTCCAGGACATTCCTCAAGATCAATTTCTGTTCATCCACCTTGTCCTGGGAGGGACATCAATGggtttccatgtcctttggcttctggttgagttcactcagtggagaaccctggcaagaggcaggaaaaggggaggaaggctttatgatacatgtgttgaatgtgcaggttcgttacataggtaaatgtgtggcatggtggtttgctgcacctatcaacccatcacctaggtattaagccctgcatgcattagctattagtcctgatgctctccctcccccgcaccccctagcaggtccctggtgtatgttgttccactccctgtgttcatgtattctcattgttcaactccc</dnaseq>| | sequence = <dnaseq>GGAAGAAGCCCGACATTTCTTATAGGAAATGGAACTCTTCATAAGTCTGGCCATGGAGGCATGGTATCCGTAACATCCCCCAAAGGAGCTAAAGAAGAAATCCACAATTTACCATGAGCATTTCTCGTCTGAAGATTGCCAAGCGATTCCTCCAGGACATTCCTCAAGATCAATTTCTGTTCATCCACCTTGTCCTGGGAGGGACATCAATGggtttccatgtcctttggcttctggttgagttcactcagtggagaaccctggcaagaggcaggaaaaggggaggaaggctttatgatacatgtgttgaatgtgcaggttcgttacataggtaaatgtgtggcatggtggtttgctgcacctatcaacccatcacctaggtattaagccctgcatgcattagctattagtcctgatgctctccctcccccgcaccccctagcaggtccctggtgtatgttgttccactccctgtgttcatgtattctcattgttcaactccc</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG022651]] |
Revision as of 07:57, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT055661 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
503 nt |
| Genomic location |
chr17-:70077329..70115599 |
| Exon number |
4 |
| Exons |
70077329..70077542,70078062..70078182,70080047..70080169,70115555..70115599 |
| Genome context |
|
| Sequence |
000001 GGAAGAAGCC CGACATTTCT TATAGGAAAT GGAACTCTTC ATAAGTCTGG CCATGGAGGC ATGGTATCCG TAACATCCCC 000080
000081 CAAAGGAGCT AAAGAAGAAA TCCACAATTT ACCATGAGCA TTTCTCGTCT GAAGATTGCC AAGCGATTCC TCCAGGACAT 000160 000161 TCCTCAAGAT CAATTTCTGT TCATCCACCT TGTCCTGGGA GGGACATCAA TGggtttcca tgtcctttgg cttctggttg 000240 000241 agttcactca gtggagaacc ctggcaagag gcaggaaaag gggaggaagg ctttatgata catgtgttga atgtgcaggt 000320 000321 tcgttacata ggtaaatgtg tggcatggtg gtttgctgca cctatcaacc catcacctag gtattaagcc ctgcatgcat 000400 000401 tagctattag tcctgatgct ctccctcccc cgcaccccct agcaggtccc tggtgtatgt tgttccactc cctgtgttca 000480 000481 tgtattctca ttgttcaact ccc |
Predicted Small Protein
| Name | NONHSAT055661_smProtein_113:334 |
| Length | 74 |
| Molecular weight | 8475.9033 |
| Aromaticity | 0.109589041096 |
| Instability index | 47.7342465753 |
| Isoelectric point | 10.4080200195 |
| Runs | 10 |
| Runs residual | 0.00715863897481 |
| Runs probability | 0.0600158982513 |
| Amino acid sequence | MSISRLKIAKRFLQDIPQDQFLFIHLVLGGTSMGFHVLWLLVEFTQWRTLARGRKRGGRL YDTCVECAGSLHR |
| Secondary structure | LLHHHHHHHHHHHHHLLLLLEEEEEEEELLLHHHHHHHHHHHHHHHHHHHHHLLLLLLEE EHHHHHHHLLLLL |
| PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL LLLLLLLLLLLLL |
| PiMo | oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiii iiiiiiiiiiiii |
