Difference between revisions of "Lnc-TAOK3-1:4"

Revision as of 08:09, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-TAOK3-1:4
Source	LNCipedia2.1
Same with	NONHSAT031028
Classification	intergenic
Length	2695 nt
Genomic location	chr12-:118553516..118573733
Exon number	5
Exons	118553516..118555687,118558838..118558980,118559306..118559423,118564286..118564475,118573662..118573733
Genome context
Sequence	000001 TCGGCCTGCA AGGCTGTTGT TTCAAGAAAT GAAAATGAAG GGCGCCCTGG AATAGGTTCG CCGAAGAGAG AGCTTGCAGG 000080 000081 CCTCTGGGAA GCAAGCCATC GTGTGGCAGA GGCCCAGGTG GCAAGGAACC AAGGGCGGCT TCTGGCCAAC AGCCAGCGAG 000160 000161 GACCTGAGAC CGTAGCCCAA CACCCCTCCA GGAACTGAAT TTTGCCAGCA ACCAGTGAGT GACCTTGGAA GTGGATCCTT 000240 000241 CCCCCGAAAG CCCGGCTTTC AGCTCAGAGA ATGGAAAAAT ATCTCTTCCT AAAGACACAG AGAAACATAA ACAAACCTGA 000320 000321 CCAATAGAAG GACCAAAACC TCTGCACAGT GCCTCACCCC TCGGAGGAAT TAACAAAAAT GTGAAGGTTA TTCGTTGAAC 000400 000401 CAATAATCTC TGAAATTTTT GGAGTTCCAT GAAGCTTGCA CCAACTATTA TCCCTGAGAT GACCTTGGCT GTGGAACCCA 000480 000481 GATTCTGTTC AGGGCCGAGA GCGCCACCTG GTGATTCCAG TTTACGGAGG CTGGTGGGAC CTCAACCCCA GCTGGTATCC 000560 000561 AGGCTCTTGA CACCATCTGG AGAAGGAATT CAAGAGTGTG TCAGAAAATG ATGAAAGTAC AAAGATTTAT TGCAAAGCGA 000640 000641 AAAATACACA CTCAAGAAAG GGGAGTATGG GTGGACTCAA GACAGAGTCC GATGGGACTT GGGGTTTCTA CCTTTTGGGT 000720 000721 TTCTTTTTTT TTTTTTTTTG ATATGGAGTC TCGCACTGTT GCCCAGGCTG GAGCGCAGTG GCGTGATTTT GGCTCACTGC 000800 000801 AACCTCTGCC TCCCGGGTTA AAACGATTCT CCTGCCTCAG CGTCCCAAGT AGCTGGGATT ACAGGCTCCC ACCACCATGC 000880 000881 CCGGCTAATT TTTGTATTTT TAGTAGAGAC GAGGCCTCAC CATATTGGCC AGGCTGTTCT CGAACTCCGG ACCTTAGGTG 000960 000961 ATCTGCCTGC CTCAGCCTCC CAAAGTGCTG GGATTACAGG CGTGAGCCAC CATGCCCAAT GGGTGTGGGA TTTAGTATAT 001040 001041 TAATGAGTGT ATAATGAGGT CCTTGGTGAA ACCTACATCA AATCCAGCAC CGTGTTGGGT CCAGTCTGTC TTAGCCAGCT 001120 001121 TGGTCCACAC CCTGGTTTTT TAGGGTCTTA TTGGCCCCTT ACTTCTGCAG CAAAAGTTTC CTTTTGCTAG TCATGTGAAA 001200 001201 CTGCCACCTG GAATTTTCTA TTCTCTAGTG ACCACCCTGT ATTATTCCTG TCTCACTGGG ACCCTAAGAA ATTGGGAATT 001280 001281 CCAACTACAC ATCCAAAATA GTTTGACTAA AACTGTTGAA AAAAGAAAAA AATAATGGCA TAAAGTATTG CTTGACTAAA 001360 001361 TTCCAGCCAG GTGCATTGGC CACTTTAGGT CGGGTGTGGT GGCTCATGCT TGTAATCCCA GCATTTTGGG AGGCTGAGGC 001440 001441 GGGAGGATCA CTTGAGGTCA GGAGTTCCAA ACCAGTCTGG CCAAAATGGT AAAACCCCCT CTCTACTAAA AATACAAAAA 001520 001521 TTAGCCGGAC CTGGTGGCGG AAGCCTGTAA TCCCAGCTAC TCTGGAGGCT GAGGCACGAA AATTGCTTGA ACCCAGGAGG 001600 001601 TGGAGGTTGC ATTGAACCAA GATCATACCA CTGCACTCTA GCCTGTGTGA CAGAGAAAGA TTCCGTCTCA AGAAACAAAA 001680 001681 ACAAAAATGA AAAACAAACA AAAAGAAAGC CCATTCTATC TTTTTTATTT TTTATTTTTT TGAGACAGGG TCTCGCTCTG 001760 001761 TCACTCAGGC TGGAGTGCCA CAGCGCGATC TCTGCTCACT ACAACCTCCA TCTCCCAGGC TCAAGCACTC CTCCCACCTC 001840 001841 AGCCTCCTGA GTAGCTGGGA CCACAGGCAC AGAAACCCCA CTGTAAATAA AGAGAGGTAG GCTTTTAAAA ATGTCACTCT 001920 001921 GTTCACAGTA AGGCAAGCAA GGGAAGCAAA ATCAATTTCT TTCTAGAGGT

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>TCGGCCTGCAAGGCTGTTGTTTCAAGAAATGAAAATGAAGGGCGCCCTGGAATAGGTTCGCCGAAGAGAGAGCTTGCAGGCCTCTGGGAAGCAAGCCATCGTGTGGCAGAGGCCCAGGTGGCAAGGAACCAAGGGCGGCTTCTGGCCAACAGCCAGCGAGGACCTGAGACCGTAGCCCAACACCCCTCCAGGAACTGAATTTTGCCAGCAACCAGTGAGTGACCTTGGAAGTGGATCCTTCCCCCGAAAGCCCGGCTTTCAGCTCAGAGAATGGAAAAATATCTCTTCCTAAAGACACAGAGAAACATAAACAAACCTGACCAATAGAAGGACCAAAACCTCTGCACAGTGCCTCACCCCTCGGAGGAATTAACAAAAATGTGAAGGTTATTCGTTGAACCAATAATCTCTGAAATTTTTGGAGTTCCATGAAGCTTGCACCAACTATTATCCCTGAGATGACCTTGGCTGTGGAACCCAGATTCTGTTCAGGGCCGAGAGCGCCACCTGGTGATTCCAGTTTACGGAGGCTGGTGGGACCTCAACCCCAGCTGGTATCCAGGCTCTTGACACCATCTGGAGAAGGAATTCAAGAGTGTGTCAGAAAATGATGAAAGTACAAAGATTTATTGCAAAGCGAAAAATACACACTCAAGAAAGGGGAGTATGGGTGGACTCAAGACAGAGTCCGATGGGACTTGGGGTTTCTACCTTTTGGGTTTCTTTTTTTTTTTTTTTTGATATGGAGTCTCGCACTGTTGCCCAGGCTGGAGCGCAGTGGCGTGATTTTGGCTCACTGCAACCTCTGCCTCCCGGGTTAAAACGATTCTCCTGCCTCAGCGTCCCAAGTAGCTGGGATTACAGGCTCCCACCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGAGGCCTCACCATATTGGCCAGGCTGTTCTCGAACTCCGGACCTTAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAATGGGTGTGGGATTTAGTATATTAATGAGTGTATAATGAGGTCCTTGGTGAAACCTACATCAAATCCAGCACCGTGTTGGGTCCAGTCTGTCTTAGCCAGCTTGGTCCACACCCTGGTTTTTTAGGGTCTTATTGGCCCCTTACTTCTGCAGCAAAAGTTTCCTTTTGCTAGTCATGTGAAACTGCCACCTGGAATTTTCTATTCTCTAGTGACCACCCTGTATTATTCCTGTCTCACTGGGACCCTAAGAAATTGGGAATTCCAACTACACATCCAAAATAGTTTGACTAAAACTGTTGAAAAAAGAAAAAAATAATGGCATAAAGTATTGCTTGACTAAATTCCAGCCAGGTGCATTGGCCACTTTAGGTCGGGTGTGGTGGCTCATGCTTGTAATCCCAGCATTTTGGGAGGCTGAGGCGGGAGGATCACTTGAGGTCAGGAGTTCCAAACCAGTCTGGCCAAAATGGTAAAACCCCCTCTCTACTAAAAATACAAAAATTAGCCGGACCTGGTGGCGGAAGCCTGTAATCCCAGCTACTCTGGAGGCTGAGGCACGAAAATTGCTTGAACCCAGGAGGTGGAGGTTGCATTGAACCAAGATCATACCACTGCACTCTAGCCTGTGTGACAGAGAAAGATTCCGTCTCAAGAAACAAAAACAAAAATGAAAAACAAACAAAAAGAAAGCCCATTCTATCTTTTTTATTTTTTATTTTTTTGAGACAGGGTCTCGCTCTGTCACTCAGGCTGGAGTGCCACAGCGCGATCTCTGCTCACTACAACCTCCATCTCCCAGGCTCAAGCACTCCTCCCACCTCAGCCTCCTGAGTAGCTGGGACCACAGGCACAGAAACCCCACTGTAAATAAAGAGAGGTAGGCTTTTAAAAATGTCACTCTGTTCACAGTAAGGCAAGCAAGGGAAGCAAAATCAATTTCTTTCTAGAGGTGGGATAATGGGTAGGGAGTGGAAGACTTTAGGAAAGAGGTGCCCCAGTTTCTGAGTCACTTCATGGCTTCAATATTCATTGACTATCAATCAACAGATGAATGGATATACAAAAGGTGGTATCTCTGTTGCAGCAGGTAGTTAGTCAGAGCTGAGCAGGGAAGGAGAGGCTCCTCCGCCCCATCAGGAGATGATCAGGCAGTTGTTAAACTGTCTCTCTCAAATAATCATTGGTTGCAGCCGATGCCAGGGAAAGACAGTCTCCCAGTAGATAGAAACGCCAGAAACTGGTGATCAGCAGCTTCCCAGTAAGATCTCAGGAGGTGGGTGAGTGGGCTTAAGCATGTGCATGAAGAGGCAAAATGGTTGAGCTTAGCTGGTACATGACCTTCCTCTAGGAACACTCAACTGATAAGGGAAGAACACCTCAAGTGAGCACACATATAGCTTCAGTAAACACACTCACATGCAGCCCCTCCCAAGTGCTGGCAGGCCATTGTACATGCAGACTGCCAACATATAAAACCACAAGTCAAAGGTCAAACCATGCACTTGAATCTCTCAAGGTCCCTACTGGCCCTCTTCCACGTGTACTTTATTTCCTTGCATTCCTGTTCTAAAACTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCGCTCTTGTTGCTCAGGCTGGAGTGCAATGGCGCGATCTCAGCTCACAGCAACCTCCACCTCCCAGGTTCAAG</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-TAOK3-1]]
+[[Category:Intergenic]][[Category:lnc-TAOK3-1]][[Category:NONHSAG012454]]