Difference between revisions of "NONHSAT056039"

Revision as of 08:10, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	NONHSAT056039
Source	NONCODE4.0
Same with	,
Classification	intergenic
Length	2538 nt
Genomic location	chr17+:74553846..74561430
Exon number	4
Exons	74553846..74553939,74555027..74555125,74557370..74557484,74559201..74561430
Genome context
Sequence	000001 GCGTTCTTTT CGAGGTCGGC CGCGTGGCTG GAAGACATGG CCACTCCAGT CGGTGTTGAG CACGGCGAGC AGTCTCAGGC 000080 000081 CTTTAGTGAT GATGATTAAA GGTGGTGGCT GTGGCCTTGA AAACAGTCAT GTGAAAACTC ATCACCTTAA GGTGTTAAGT 000160 000161 GTAAGGATCT TCATGATGAA ATTTCTGTAA ATGGTGCAGT CAGCCTCAGT TTCCAAAGCC GGAAAAGGAT CCTCTAGTAG 000240 000241 CCACGGTGTG GCAGCTGCTC TGAACCAGGA CCTGGACCCG GACCCAAAGT GCCATGTCTT TAATGTGAGT TAGCTCCCAG 000320 000321 CGATGCCAGA TGGGATCAGC ACAGCCCTGC CTCTGCTGCT AATTGTTCCT CTAAAGTAAT CGCCATGCGT TCTTTGGGCT 000400 000401 TCATCTTTAA AGGAATGAAG CAACTGAGAT TATTCTGGAA AACCTTTTGG CAGTTAGTGA AATTAGAGTA CAACTAAGAA 000480 000481 CATTTTCAGA CCTCCACTGT GGATGACCTG GGTATAATCT CACAAATCGA TGGGACTGCA AGGATTGTAA ACTGAAATGA 000560 000561 ACATGATTAT ACTCTGTTGG AAGAGCCTAA GAGGAAACTG ATGCCATGAG TTTCAGAGAG TAATGCTTAA CCCCAGTTAC 000640 000641 ACAGGATGCC GTCTTGTGTT TCCTCTTGTT TAgttaccca ctacagtgat tttgtgatct gctaatgggt tgccacccac 000720 000721 aACCATTGCT TTAGCACTTT TACTTCAAAT CAATGAAGGA TTGATAAAAG TTCTCCTGGT GTCTCCGCAG AGTGCCTTCC 000800 000801 AGGAACAGAT CTTTGCATAG AATATCAGTG GTTTCCTTTT TTGTTTCAAA TAGTGGTCAG AAAATACCCA GTGTTGACTC 000880 000881 ACCAAGGCAA TCAGCTTCCT TTTTCCCttt ttttgttttt tttttaacat tttatatttt tgctttattt tattttattt 000960 000961 tattttattt tattttattt tattttattt tttgagacgg agttccactc tgtcgccagg ctggagtgaa gtggtacaat 001040 001041 cttggctcac tgcaacctcc acctcccggg ttcaagcaat tctcctggct cagcctcctg agtgctggga ctacaggcgc 001120 001121 gtaccttctt tagtagagac tgggtttcac catgttggcc aggatggtct ctatctcctg accttgtgat ctgcctgcct 001200 001201 cagcttccca aagtgctgag atgacaggtg tgagccatca gacccagcat tttttttttt aatttaaatt taaatttttt 001280 001281 ttcatttttt tgagaggttt tttttgtttt gttttgttgt tgttgttgtt gttgtttttg agacagtctt gctctgtcac 001360 001361 ccaggctggg agtgcagtgg catgatctct gcaacctcta cctcccaggt tcaagcaatt cttgtgcctc agcctcccaa 001440 001441 gtaactggga ctacaggtgc acgctaccac acctggctga ttttttttgt tttagtagag acagggtttc aaccatgttg 001520 001521 cccaggttgg tctcaaactc ctgagctcag gcaatccacc cgccttggcc tcccaaagtg ctaggattac aggtgtgagc 001600 001601 caccacaccc agcTAttttt tctttcgttt tttaatttta aagttggggg ggggtctcaa tttgttaccc tggctggtct 001680 001681 cgaactcccg gacttaagcg atcctcTGGC TCCAAGCCCA CTACCAGTCT CAGGTTTCTT TACTAAAAGA TCACTACCTT 001760 001761 TTTTtctctt atctgctgcc atgtgagatg tggctttcac cttccgccat gattgtgagg ccttcccagc catgtagaac 001840 001841 tgtaagtcca ataaacctct tttgtaaatt aAAAAAAAAA AATCACTATT TAAGATACTA GGATGGATTG TGACTGTTGA 001920 001921 GGAGTACTTA CATATCCTAC ATTTGACTAC ATTATTTCCA AACCAAGTAT TCCATCC

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>GCGTTCTTTTCGAGGTCGGCCGCGTGGCTGGAAGACATGGCCACTCCAGTCGGTGTTGAGCACGGCGAGCAGTCTCAGGCCTTTAGTGATGATGATTAAAGGTGGTGGCTGTGGCCTTGAAAACAGTCATGTGAAAACTCATCACCTTAAGGTGTTAAGTGTAAGGATCTTCATGATGAAATTTCTGTAAATGGTGCAGTCAGCCTCAGTTTCCAAAGCCGGAAAAGGATCCTCTAGTAGCCACGGTGTGGCAGCTGCTCTGAACCAGGACCTGGACCCGGACCCAAAGTGCCATGTCTTTAATGTGAGTTAGCTCCCAGCGATGCCAGATGGGATCAGCACAGCCCTGCCTCTGCTGCTAATTGTTCCTCTAAAGTAATCGCCATGCGTTCTTTGGGCTTCATCTTTAAAGGAATGAAGCAACTGAGATTATTCTGGAAAACCTTTTGGCAGTTAGTGAAATTAGAGTACAACTAAGAACATTTTCAGACCTCCACTGTGGATGACCTGGGTATAATCTCACAAATCGATGGGACTGCAAGGATTGTAAACTGAAATGAACATGATTATACTCTGTTGGAAGAGCCTAAGAGGAAACTGATGCCATGAGTTTCAGAGAGTAATGCTTAACCCCAGTTACACAGGATGCCGTCTTGTGTTTCCTCTTGTTTAgttacccactacagtgattttgtgatctgctaatgggttgccacccacaACCATTGCTTTAGCACTTTTACTTCAAATCAATGAAGGATTGATAAAAGTTCTCCTGGTGTCTCCGCAGAGTGCCTTCCAGGAACAGATCTTTGCATAGAATATCAGTGGTTTCCTTTTTTGTTTCAAATAGTGGTCAGAAAATACCCAGTGTTGACTCACCAAGGCAATCAGCTTCCTTTTTCCCtttttttgttttttttttaacattttatatttttgctttattttattttattttattttattttattttattttattttattttttgagacggagttccactctgtcgccaggctggagtgaagtggtacaatcttggctcactgcaacctccacctcccgggttcaagcaattctcctggctcagcctcctgagtgctgggactacaggcgcgtaccttctttagtagagactgggtttcaccatgttggccaggatggtctctatctcctgaccttgtgatctgcctgcctcagcttcccaaagtgctgagatgacaggtgtgagccatcagacccagcatttttttttttaatttaaatttaaattttttttcatttttttgagaggttttttttgttttgttttgttgttgttgttgttgttgtttttgagacagtcttgctctgtcacccaggctgggagtgcagtggcatgatctctgcaacctctacctcccaggttcaagcaattcttgtgcctcagcctcccaagtaactgggactacaggtgcacgctaccacacctggctgattttttttgttttagtagagacagggtttcaaccatgttgcccaggttggtctcaaactcctgagctcaggcaatccacccgccttggcctcccaaagtgctaggattacaggtgtgagccaccacacccagcTAttttttctttcgttttttaattttaaagttgggggggggtctcaatttgttaccctggctggtctcgaactcccggacttaagcgatcctcTGGCTCCAAGCCCACTACCAGTCTCAGGTTTCTTTACTAAAAGATCACTACCTTTTTTtctcttatctgctgccatgtgagatgtggctttcaccttccgccatgattgtgaggccttcccagccatgtagaactgtaagtccaataaacctcttttgtaaattaAAAAAAAAAAATCACTATTTAAGATACTAGGATGGATTGTGACTGTTGAGGAGTACTTACATATCCTACATTTGACTACATTATTTCCAAACCAAGTATTCCATCCAAAGGAACATACTGCTATCATAGAGACCAAGGAGGGACTGTTTAAGGTTGCCAAGGTGAAGCGAGCTGAGAGGCTTTGTCCTCGTGCCAGTAACTCTGAAATCTCTCTTAATTCCTGCTGTCCAGGCAGCAGAATGCCATGGTTTCCCCAAGTAGGTAGCTGCTTTAGCAGTTAAAGCCCAAATGTCTGTTCTGTTGATCAGAGGTCTCTGAATTTCTGAAGTGGTGTTTCGTTTCTGGTGACTGAGTTAATCCTTTACAATCCCTCTTGTAAAGTGTGCTAATAGAAAGAATCCACCTTTCAAAGCTGCAGAACCAGACCGTGCCCTAAATTGACCAACGTAACTGATGTGCCTCAGGAAGTCTCTTGCCAGCTGTCCCTGTGAAGACCCCCCTCCTCCCCCCCAGCTGCTGCCTTGCACACTGAAGCATCTCAGACTGTGCAAAGCCGTGTAGTCATCAAGACAGTAAATCCCAGGGCTTGGTTAAGTGCTGTGTGATAACTTGTTTGGATGAGACTTAACTTAAAACCACTTACAATAAACTTGGGAAACTACCGTCA</dnaseq>|
 }}
-[[Category:Intergenic]]
+[[Category:Intergenic]][[Category:NONHSAG022825]]