Difference between revisions of "NONHSAT006291"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>aactcttgacctcaggtgatccactcacctcagcctcccaaagcgctaggattacaggcgtgagccaccacgcTGGCCGATAATTTTGATTTGGTATATCTGCCCTCCTCCTCCATTGGGTGAAAGTTTTTTGAGAGTAATATATGATGTTGACATATGAAGCCTGCCTCCCAAAGTGCCTAGGACAAGTTTTTATTCTTgactgcttgtcttttatttccttattcccagtacctggtggagctcttgattcataacaagtgctatgtaaatgctaattgtatcaattaatATTACTGCCTACTTGGAGCTTCAAGTCTAATTTGGGGAAAATAAAGAGCAACAGAAAAGAGAACACTTGGTCCAACACATAAAAAGGGTGATAATATTTTAGAGAGTTTGGGTAGACTTGAATATTATTTGTTTAGAACCTGAATCTCAAGTCTAAGTCTGTAACAAGATTTCTCTTCCAGATGATGAGGAGTCTGATGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCGGAGCTTTGGAGAGATGAAGTTTAAACAGTGTCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAACACTACTGGGACCTTGCGCTGAGTGAATCTGTGTTAGAGTCCACTGATTGAGACTACTGCAAGCCCTTGCCTCTCCTCCCTTGCCTTTGTCTCTTCAGTCCTCTCACTTATTCTATTTCCCAACCCCCTCCCACTTGTTTGTGTGATCTCAGAACTGTGCCAAGCAGACACTGGGACAAAGGGAGAATATCTTGCTCCCCTCCTGAGTCAGCCTGGTGTTGCCCTTTATTCCCCTTATGTGCATATGATTAAAGAGTTATTTTTAAA</dnaseq>| | sequence = <dnaseq>aactcttgacctcaggtgatccactcacctcagcctcccaaagcgctaggattacaggcgtgagccaccacgcTGGCCGATAATTTTGATTTGGTATATCTGCCCTCCTCCTCCATTGGGTGAAAGTTTTTTGAGAGTAATATATGATGTTGACATATGAAGCCTGCCTCCCAAAGTGCCTAGGACAAGTTTTTATTCTTgactgcttgtcttttatttccttattcccagtacctggtggagctcttgattcataacaagtgctatgtaaatgctaattgtatcaattaatATTACTGCCTACTTGGAGCTTCAAGTCTAATTTGGGGAAAATAAAGAGCAACAGAAAAGAGAACACTTGGTCCAACACATAAAAAGGGTGATAATATTTTAGAGAGTTTGGGTAGACTTGAATATTATTTGTTTAGAACCTGAATCTCAAGTCTAAGTCTGTAACAAGATTTCTCTTCCAGATGATGAGGAGTCTGATGAGGAAGCTGTGAAGAAAACCAACAAATGTGTACTAGTCTGGGAGGGTACAGCCAAAGACCGGAGCTTTGGAGAGATGAAGTTTAAACAGTGTCCTACAGAGAACATGGCTCGTGAGCATTTCAAAAAGCATGGGGCTGAACACTACTGGGACCTTGCGCTGAGTGAATCTGTGTTAGAGTCCACTGATTGAGACTACTGCAAGCCCTTGCCTCTCCTCCCTTGCCTTTGTCTCTTCAGTCCTCTCACTTATTCTATTTCCCAACCCCCTCCCACTTGTTTGTGTGATCTCAGAACTGTGCCAAGCAGACACTGGGACAAAGGGAGAATATCTTGCTCCCCTCCTGAGTCAGCCTGGTGTTGCCCTTTATTCCCCTTATGTGCATATGATTAAAGAGTTATTTTTAAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG002848]] |
Revision as of 08:53, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT006291 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
898 nt |
Genomic location |
chr1+:150321160..150325671 |
Exon number |
2 |
Exons |
150321160..150321694,150325309..150325671 |
Genome context |
|
Sequence |
000001 aactcttgac ctcaggtgat ccactcacct cagcctccca aagcgctagg attacaggcg tgagccacca cgcTGGCCGA 000080
000081 TAATTTTGAT TTGGTATATC TGCCCTCCTC CTCCATTGGG TGAAAGTTTT TTGAGAGTAA TATATGATGT TGACATATGA 000160 000161 AGCCTGCCTC CCAAAGTGCC TAGGACAAGT TTTTATTCTT gactgcttgt cttttatttc cttattccca gtacctggtg 000240 000241 gagctcttga ttcataacaa gtgctatgta aatgctaatt gtatcaatta atATTACTGC CTACTTGGAG CTTCAAGTCT 000320 000321 AATTTGGGGA AAATAAAGAG CAACAGAAAA GAGAACACTT GGTCCAACAC ATAAAAAGGG TGATAATATT TTAGAGAGTT 000400 000401 TGGGTAGACT TGAATATTAT TTGTTTAGAA CCTGAATCTC AAGTCTAAGT CTGTAACAAG ATTTCTCTTC CAGATGATGA 000480 000481 GGAGTCTGAT GAGGAAGCTG TGAAGAAAAC CAACAAATGT GTACTAGTCT GGGAGGGTAC AGCCAAAGAC CGGAGCTTTG 000560 000561 GAGAGATGAA GTTTAAACAG TGTCCTACAG AGAACATGGC TCGTGAGCAT TTCAAAAAGC ATGGGGCTGA ACACTACTGG 000640 000641 GACCTTGCGC TGAGTGAATC TGTGTTAGAG TCCACTGATT GAGACTACTG CAAGCCCTTG CCTCTCCTCC CTTGCCTTTG 000720 000721 TCTCTTCAGT CCTCTCACTT ATTCTATTTC CCAACCCCCT CCCACTTGTT TGTGTGATCT CAGAACTGTG CCAAGCAGAC 000800 000801 ACTGGGACAA AGGGAGAATA TCTTGCTCCC CTCCTGAGTC AGCCTGGTGT TGCCCTTTAT TCCCCTTATG TGCATATGAT 000880 000881 TAAAGAGTTA TTTTTAAA |
Predicted Small Protein
Name | NONHSAT006291_smProtein_143:256 |
Length | 38 |
Molecular weight | 3993.7924 |
Aromaticity | 0.108108108108 |
Instability index | 64.6405405405 |
Isoelectric point | 4.02764892578 |
Runs | 8 |
Runs residual | 0.03644929333 |
Runs probability | 0.0350865571453 |
Amino acid sequence | MMLTYEACLPKCLGQVFILDCLSFISLFPVPGGALDS |
Secondary structure | LLLLHHHHHHHHHLLEEEHHHHLHHHHLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooo |