Difference between revisions of "ENST00000398796.2"

From LncRNAWiki
Jump to: navigation, search
Line 42: Line 42:
 
sequence = <dnaseq>CGGGCAACGTGGAGAGATGTAGGAAGTGAACCTGAAGCCTGACACACTCAAGGTCTCGGAACCGAAAATAATAGGAATTGTTCTTATTTTTCCAGTGGAATCAAGCACAGAGATGGGCACGCCTCTTTACAGAACCAAAGATTCAGAACTGTGCCTTACCCTTTGCTTATGAGGCGGAGGAGGAGGAAGAGAAAGAACCACCGCAAAGAGAGATGGCAACAAAGGACAAAATGCTTGGAGGAGCAACAGACACCCTGAGACCATGAAGACAGGACGAAGTCACACACTAAGATCTGAGGCCCAGGGTCACCACAAACCCGGGAGACATGAGGCCAGGCCTGAGAGGCACAGGCAGGCTGAGGAATGGACAGAAGAGCAACAGAGAAGCCTGGAGGATGAAAGCCAACTCTGCAAAGAGCTTCCAAGAGTCTTCCTGCCACAGAAATTCCACTTGGCCACAGAAATGGCCCTGGCCCTGGGCCAGGAGAGAGGTGGCGACGAGCTGCTCATGGCAATGACTTTCAGTCAGCATGTCTTACCTGTGCTTCCAAGGGTGGAGATGCCACTTTGAGTAGGTCACTGGGTCAGGCAGGTCACAAACCAAGCTCCTCCTACACAGTGAGTTCACGGAGACAGAGAGAAGGAAGGGAAGGAGGTTCTCAGCTCTACTGATTCCTTAGGTCAAGGAGGGACAGGGTCCCTGTACTTGGGGACCCTCCAGTCTGATGGGAAGATACAAGGCAACCCTCTTAGAGCCGTAGAATGAATGCCACCTATAGTTCCTCCCTTCAGGAAGGAAATCCAGTCTGATGGAAGAGACACGGCCCCTGTTGTATCATTCTTGCCTTCTTACCCATGTCACACAAGGGAGTGAAGGAGGTGGCAGGCCCAGGGATAGGTCCATTTCTGTGGTGAATGGAGGCTTTCAGAGGACATTCCCACAGCCCTGCTGTCAAGGGCCCCTTCCCCTTCCTCCCTCCCCGGCACGATGCCTTACCCACTGGAATGAATCCTGAGCTCTGAGCCTATTCCTAACACATGAATGCTGACCCCTTTGTCACGTCCCGCTTTCCCTCCAACTCTGTTTTTTGTTCTTTTTCCCACCCAGACTCGCCCTCCCCCACTTGCCATTTCCCAAGCTCATCCCGGGGAGACCAGACTCAATGGCCCACTGGTGATCTTGTTTTACATGAGACATTTCCAAAAAAGACCAAAAAATCCTTTCCAGGAAAATGCCATTTTTAAAATTCAGCTCCAGACACTGCGGCAACATTAGGAAAACAAAGGACTTGGCAGAAAGGTTTTCTGCGTGGGGACTTTCTCTCGAAAATACCTTCTCCAAATTGCCTCCAGTGGGGATGACTCCAAGGGTCAGTTCTGGAGCACCCAGGCAATTGCAGACAGAGTGACTTCGGGTTTGTACACTGTCCCAGGTCTTTCCTTACCTGATATCACCCTGGGATCTTCCAGGCTTAAACAAGGAGCCCCTTCCAAGGGTCCCCAAAGGAAGCAGCTGTCTCTGAGGGTCAAGAAATAATGCTGCTTCCTTCCTCCAGAGGGGACTCCTCAACCCCTCTCTTGCCACCATCACTAAGCCAGGGGCCCAGGTTAGGAGGTGGAGGGACATAGTGTGCTTAGTAGAGAGCTTGTCTTCTCTTATCATCCAAGTGAGAGGAATACACAGCTTCCCCTGGGGCATACATAGTGGTGTTCCCCTTTTTTGCATGTATCAGGTATAATTAATCAGGTTGACATCACATATGTAATAATAATGGCCATTATTTATTAAACACTTCCAATGTG</dnaseq>|
 
sequence = <dnaseq>CGGGCAACGTGGAGAGATGTAGGAAGTGAACCTGAAGCCTGACACACTCAAGGTCTCGGAACCGAAAATAATAGGAATTGTTCTTATTTTTCCAGTGGAATCAAGCACAGAGATGGGCACGCCTCTTTACAGAACCAAAGATTCAGAACTGTGCCTTACCCTTTGCTTATGAGGCGGAGGAGGAGGAAGAGAAAGAACCACCGCAAAGAGAGATGGCAACAAAGGACAAAATGCTTGGAGGAGCAACAGACACCCTGAGACCATGAAGACAGGACGAAGTCACACACTAAGATCTGAGGCCCAGGGTCACCACAAACCCGGGAGACATGAGGCCAGGCCTGAGAGGCACAGGCAGGCTGAGGAATGGACAGAAGAGCAACAGAGAAGCCTGGAGGATGAAAGCCAACTCTGCAAAGAGCTTCCAAGAGTCTTCCTGCCACAGAAATTCCACTTGGCCACAGAAATGGCCCTGGCCCTGGGCCAGGAGAGAGGTGGCGACGAGCTGCTCATGGCAATGACTTTCAGTCAGCATGTCTTACCTGTGCTTCCAAGGGTGGAGATGCCACTTTGAGTAGGTCACTGGGTCAGGCAGGTCACAAACCAAGCTCCTCCTACACAGTGAGTTCACGGAGACAGAGAGAAGGAAGGGAAGGAGGTTCTCAGCTCTACTGATTCCTTAGGTCAAGGAGGGACAGGGTCCCTGTACTTGGGGACCCTCCAGTCTGATGGGAAGATACAAGGCAACCCTCTTAGAGCCGTAGAATGAATGCCACCTATAGTTCCTCCCTTCAGGAAGGAAATCCAGTCTGATGGAAGAGACACGGCCCCTGTTGTATCATTCTTGCCTTCTTACCCATGTCACACAAGGGAGTGAAGGAGGTGGCAGGCCCAGGGATAGGTCCATTTCTGTGGTGAATGGAGGCTTTCAGAGGACATTCCCACAGCCCTGCTGTCAAGGGCCCCTTCCCCTTCCTCCCTCCCCGGCACGATGCCTTACCCACTGGAATGAATCCTGAGCTCTGAGCCTATTCCTAACACATGAATGCTGACCCCTTTGTCACGTCCCGCTTTCCCTCCAACTCTGTTTTTTGTTCTTTTTCCCACCCAGACTCGCCCTCCCCCACTTGCCATTTCCCAAGCTCATCCCGGGGAGACCAGACTCAATGGCCCACTGGTGATCTTGTTTTACATGAGACATTTCCAAAAAAGACCAAAAAATCCTTTCCAGGAAAATGCCATTTTTAAAATTCAGCTCCAGACACTGCGGCAACATTAGGAAAACAAAGGACTTGGCAGAAAGGTTTTCTGCGTGGGGACTTTCTCTCGAAAATACCTTCTCCAAATTGCCTCCAGTGGGGATGACTCCAAGGGTCAGTTCTGGAGCACCCAGGCAATTGCAGACAGAGTGACTTCGGGTTTGTACACTGTCCCAGGTCTTTCCTTACCTGATATCACCCTGGGATCTTCCAGGCTTAAACAAGGAGCCCCTTCCAAGGGTCCCCAAAGGAAGCAGCTGTCTCTGAGGGTCAAGAAATAATGCTGCTTCCTTCCTCCAGAGGGGACTCCTCAACCCCTCTCTTGCCACCATCACTAAGCCAGGGGCCCAGGTTAGGAGGTGGAGGGACATAGTGTGCTTAGTAGAGAGCTTGTCTTCTCTTATCATCCAAGTGAGAGGAATACACAGCTTCCCCTGGGGCATACATAGTGGTGTTCCCCTTTTTTGCATGTATCAGGTATAATTAATCAGGTTGACATCACATATGTAATAATAATGGCCATTATTTATTAAACACTTCCAATGTG</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000214691.6]]
+
[[Category:Intergenic]][[Category:ENSG00000214691.6]][[Category:lnc-PKDCC-2]]

Revision as of 09:07, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000398796.2

Source

Gencode19

Same with

lnc-PKDCC-2:5

Classification

intergenic

Length

1803 nt

Genomic location

chr2+:42104695..42121179

Exon number

3

Exons

42104695..42104918,42117491..42117558,42119669..42121179

Genome context

Sequence
000001 CGGGCAACGT GGAGAGATGT AGGAAGTGAA CCTGAAGCCT GACACACTCA AGGTCTCGGA ACCGAAAATA ATAGGAATTG 000080
000081 TTCTTATTTT TCCAGTGGAA TCAAGCACAG AGATGGGCAC GCCTCTTTAC AGAACCAAAG ATTCAGAACT GTGCCTTACC 000160
000161 CTTTGCTTAT GAGGCGGAGG AGGAGGAAGA GAAAGAACCA CCGCAAAGAG AGATGGCAAC AAAGGACAAA ATGCTTGGAG 000240
000241 GAGCAACAGA CACCCTGAGA CCATGAAGAC AGGACGAAGT CACACACTAA GATCTGAGGC CCAGGGTCAC CACAAACCCG 000320
000321 GGAGACATGA GGCCAGGCCT GAGAGGCACA GGCAGGCTGA GGAATGGACA GAAGAGCAAC AGAGAAGCCT GGAGGATGAA 000400
000401 AGCCAACTCT GCAAAGAGCT TCCAAGAGTC TTCCTGCCAC AGAAATTCCA CTTGGCCACA GAAATGGCCC TGGCCCTGGG 000480
000481 CCAGGAGAGA GGTGGCGACG AGCTGCTCAT GGCAATGACT TTCAGTCAGC ATGTCTTACC TGTGCTTCCA AGGGTGGAGA 000560
000561 TGCCACTTTG AGTAGGTCAC TGGGTCAGGC AGGTCACAAA CCAAGCTCCT CCTACACAGT GAGTTCACGG AGACAGAGAG 000640
000641 AAGGAAGGGA AGGAGGTTCT CAGCTCTACT GATTCCTTAG GTCAAGGAGG GACAGGGTCC CTGTACTTGG GGACCCTCCA 000720
000721 GTCTGATGGG AAGATACAAG GCAACCCTCT TAGAGCCGTA GAATGAATGC CACCTATAGT TCCTCCCTTC AGGAAGGAAA 000800
000801 TCCAGTCTGA TGGAAGAGAC ACGGCCCCTG TTGTATCATT CTTGCCTTCT TACCCATGTC ACACAAGGGA GTGAAGGAGG 000880
000881 TGGCAGGCCC AGGGATAGGT CCATTTCTGT GGTGAATGGA GGCTTTCAGA GGACATTCCC ACAGCCCTGC TGTCAAGGGC 000960
000961 CCCTTCCCCT TCCTCCCTCC CCGGCACGAT GCCTTACCCA CTGGAATGAA TCCTGAGCTC TGAGCCTATT CCTAACACAT 001040
001041 GAATGCTGAC CCCTTTGTCA CGTCCCGCTT TCCCTCCAAC TCTGTTTTTT GTTCTTTTTC CCACCCAGAC TCGCCCTCCC 001120
001121 CCACTTGCCA TTTCCCAAGC TCATCCCGGG GAGACCAGAC TCAATGGCCC ACTGGTGATC TTGTTTTACA TGAGACATTT 001200
001201 CCAAAAAAGA CCAAAAAATC CTTTCCAGGA AAATGCCATT TTTAAAATTC AGCTCCAGAC ACTGCGGCAA CATTAGGAAA 001280
001281 ACAAAGGACT TGGCAGAAAG GTTTTCTGCG TGGGGACTTT CTCTCGAAAA TACCTTCTCC AAATTGCCTC CAGTGGGGAT 001360
001361 GACTCCAAGG GTCAGTTCTG GAGCACCCAG GCAATTGCAG ACAGAGTGAC TTCGGGTTTG TACACTGTCC CAGGTCTTTC 001440
001441 CTTACCTGAT ATCACCCTGG GATCTTCCAG GCTTAAACAA GGAGCCCCTT CCAAGGGTCC CCAAAGGAAG CAGCTGTCTC 001520
001521 TGAGGGTCAA GAAATAATGC TGCTTCCTTC CTCCAGAGGG GACTCCTCAA CCCCTCTCTT GCCACCATCA CTAAGCCAGG 001600
001601 GGCCCAGGTT AGGAGGTGGA GGGACATAGT GTGCTTAGTA GAGAGCTTGT CTTCTCTTAT CATCCAAGTG AGAGGAATAC 001680
001681 ACAGCTTCCC CTGGGGCATA CATAGTGGTG TTCCCCTTTT TTGCATGTAT CAGGTATAAT TAATCAGGTT GACATCACAT 001760
001761 ATGTAATAAT AATGGCCATT ATTTATTAAA CACTTCCAAT GTG
[back to top]