Difference between revisions of "ENST00000414795.1"
Line 42: | Line 42: | ||
sequence = <dnaseq>TTCAATCCCACCCTTCCTTACCAGATACTAAAGTCATTTCTACCTTTCCTCTTGAGATTTGCTGTTAGATATTAGAACTTCTCTTTGTCACATACTTACAGGGAGATTTTGATTATCCATGGGATTCCATTCATAACCTCATAAACCACCCCCACGAAGAAATTATATATCTCGAAGAGGTTATATGGGCACATTGTGAGATGGTGGCCTCCCATGAGCCAAGAAAAGAGGGCTTAAAATGAATCCTACCTGGCTGGCACCTTGATCTTGGACTTCCTAGCATCCAGAAATGTGACATGGTTTTCTGGTGCCTTGGCAACTGCTCACGATGCATGGGAAGACTAAACACTTTGTGTACAGCATTCTGTCTCATCCAGTGAAGACTTCCTCTGGATTATTGCAGCAGACACCTCTAACCTCCTTAATCTGTACTGAATCTTGCTCTGTCGCCAGGCTGGAGTGCAGTGGTGCGATATTGGCTCACTGCAACCTCCGCCTCTCGGGTT</dnaseq>| | sequence = <dnaseq>TTCAATCCCACCCTTCCTTACCAGATACTAAAGTCATTTCTACCTTTCCTCTTGAGATTTGCTGTTAGATATTAGAACTTCTCTTTGTCACATACTTACAGGGAGATTTTGATTATCCATGGGATTCCATTCATAACCTCATAAACCACCCCCACGAAGAAATTATATATCTCGAAGAGGTTATATGGGCACATTGTGAGATGGTGGCCTCCCATGAGCCAAGAAAAGAGGGCTTAAAATGAATCCTACCTGGCTGGCACCTTGATCTTGGACTTCCTAGCATCCAGAAATGTGACATGGTTTTCTGGTGCCTTGGCAACTGCTCACGATGCATGGGAAGACTAAACACTTTGTGTACAGCATTCTGTCTCATCCAGTGAAGACTTCCTCTGGATTATTGCAGCAGACACCTCTAACCTCCTTAATCTGTACTGAATCTTGCTCTGTCGCCAGGCTGGAGTGCAGTGGTGCGATATTGGCTCACTGCAACCTCCGCCTCTCGGGTT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-CMPK2-1]] | + | [[Category:Intergenic]][[Category:lnc-CMPK2-1]][[Category:NONHSAG026902]] |
Revision as of 09:20, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000414795.1 |
Source |
Gencode19 |
Same with |
lnc-CMPK2-1:1,NONHSAT068918 |
Classification |
intergenic |
Length |
506 nt |
Genomic location |
chr2-:6969011..6980595 |
Exon number |
4 |
Exons |
6969011..6969086,6970099..6970237,6973445..6973561,6980422..6980595 |
Genome context |
|
Sequence |
000001 TTCAATCCCA CCCTTCCTTA CCAGATACTA AAGTCATTTC TACCTTTCCT CTTGAGATTT GCTGTTAGAT ATTAGAACTT 000080
000081 CTCTTTGTCA CATACTTACA GGGAGATTTT GATTATCCAT GGGATTCCAT TCATAACCTC ATAAACCACC CCCACGAAGA 000160 000161 AATTATATAT CTCGAAGAGG TTATATGGGC ACATTGTGAG ATGGTGGCCT CCCATGAGCC AAGAAAAGAG GGCTTAAAAT 000240 000241 GAATCCTACC TGGCTGGCAC CTTGATCTTG GACTTCCTAG CATCCAGAAA TGTGACATGG TTTTCTGGTG CCTTGGCAAC 000320 000321 TGCTCACGAT GCATGGGAAG ACTAAACACT TTGTGTACAG CATTCTGTCT CATCCAGTGA AGACTTCCTC TGGATTATTG 000400 000401 CAGCAGACAC CTCTAACCTC CTTAATCTGT ACTGAATCTT GCTCTGTCGC CAGGCTGGAG TGCAGTGGTG CGATATTGGC 000480 000481 TCACTGCAAC CTCCGCCTCT CGGGTT |
Predicted Small Protein
Name | ENST00000414795.1_smProtein_296:379 |
Length | 28 |
Molecular weight | 3084.7697 |
Aromaticity | 0.111111111111 |
Instability index | 47.8222222222 |
Isoelectric point | 8.41741943359 |
Runs | 5 |
Runs residual | 0.0214707461084 |
Runs probability | 0.0334393216747 |
Amino acid sequence | MVFWCLGNCSRCMGRLNTLCTAFCLIQ |
Secondary structure | LEEEELLLLLHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |