Difference between revisions of "NONHSAT127382"

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sequence = <dnaseq>gaaactgtatttatgaaaaagaatacaaaattccaattacaaaattGAACATGCATTAAATATCTCCATGGAGAAACTGCAGCAGCAACAGTACAAGTGAGGGTATGCTATATTCAATTAGCCATGAACATTTGAGAGCAACTTTATCCAGATCAACGAAAGAGAAGTGATAGGTGTGCACAACTATGTCAAATGGTGACTGTGGGCATTGCATGCACCTGCCACCTCAAACTACCTGAGGTCATGCTGCTGGCCCCACCAGCTGCAAGCTAGAAAAAGCGTGTGCCAAAGTGGCTGTGCCAGCCAGGGAAGAGGGGCCACAAGAACTTAGAGCTAACCAGACTGACTGTCTGACATTTTGTAGAGATATCTTCAGGACCATGAGAAACAGCTCCACCTGAAGCTTACCTGAAACCGTGTCTCCTTTCAGATGCAATAAATCTTTTCATTTGTTGGAAAAATGTTTGTTTCCTCCTGATAGCAGCAGTGGAAGGTTACACCAGTA</dnaseq>|
 
sequence = <dnaseq>gaaactgtatttatgaaaaagaatacaaaattccaattacaaaattGAACATGCATTAAATATCTCCATGGAGAAACTGCAGCAGCAACAGTACAAGTGAGGGTATGCTATATTCAATTAGCCATGAACATTTGAGAGCAACTTTATCCAGATCAACGAAAGAGAAGTGATAGGTGTGCACAACTATGTCAAATGGTGACTGTGGGCATTGCATGCACCTGCCACCTCAAACTACCTGAGGTCATGCTGCTGGCCCCACCAGCTGCAAGCTAGAAAAAGCGTGTGCCAAAGTGGCTGTGCCAGCCAGGGAAGAGGGGCCACAAGAACTTAGAGCTAACCAGACTGACTGTCTGACATTTTGTAGAGATATCTTCAGGACCATGAGAAACAGCTCCACCTGAAGCTTACCTGAAACCGTGTCTCCTTTCAGATGCAATAAATCTTTTCATTTGTTGGAAAAATGTTTGTTTCCTCCTGATAGCAGCAGTGGAAGGTTACACCAGTA</dnaseq>|
 
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[[Category:Intergenic]]
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[[Category:Intergenic]][[Category:NONHSAG050581]]

Revision as of 09:58, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT127382

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

505 nt

Genomic location

chr8+:80432380..80432884

Exon number

1

Exons

80432380..80432884

Genome context

Sequence
000001 gaaactgtat ttatgaaaaa gaatacaaaa ttccaattac aaaattGAAC ATGCATTAAA TATCTCCATG GAGAAACTGC 000080
000081 AGCAGCAACA GTACAAGTGA GGGTATGCTA TATTCAATTA GCCATGAACA TTTGAGAGCA ACTTTATCCA GATCAACGAA 000160
000161 AGAGAAGTGA TAGGTGTGCA CAACTATGTC AAATGGTGAC TGTGGGCATT GCATGCACCT GCCACCTCAA ACTACCTGAG 000240
000241 GTCATGCTGC TGGCCCCACC AGCTGCAAGC TAGAAAAAGC GTGTGCCAAA GTGGCTGTGC CAGCCAGGGA AGAGGGGCCA 000320
000321 CAAGAACTTA GAGCTAACCA GACTGACTGT CTGACATTTT GTAGAGATAT CTTCAGGACC ATGAGAAACA GCTCCACCTG 000400
000401 AAGCTTACCT GAAACCGTGT CTCCTTTCAG ATGCAATAAA TCTTTTCATT TGTTGGAAAA ATGTTTGTTT CCTCCTGATA 000480
000481 GCAGCAGTGG AAGGTTACAC CAGTA
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Predicted Small Protein

Name NONHSAT127382_smProtein_104:169
Length 22
Molecular weight 2487.8324
Aromaticity 0.047619047619
Instability index 45.2
Isoelectric point 9.69415283203
Runs 5
Runs residual 0.00816326530612
Runs probability 0.0100865571454
Amino acid sequence MLYSISHEHLRATLSRSTKEK
Secondary structure LLEELLHHHHHHHHHHHHLLL
PRMN -
PiMo -