Difference between revisions of "NONHSAT127382"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>gaaactgtatttatgaaaaagaatacaaaattccaattacaaaattGAACATGCATTAAATATCTCCATGGAGAAACTGCAGCAGCAACAGTACAAGTGAGGGTATGCTATATTCAATTAGCCATGAACATTTGAGAGCAACTTTATCCAGATCAACGAAAGAGAAGTGATAGGTGTGCACAACTATGTCAAATGGTGACTGTGGGCATTGCATGCACCTGCCACCTCAAACTACCTGAGGTCATGCTGCTGGCCCCACCAGCTGCAAGCTAGAAAAAGCGTGTGCCAAAGTGGCTGTGCCAGCCAGGGAAGAGGGGCCACAAGAACTTAGAGCTAACCAGACTGACTGTCTGACATTTTGTAGAGATATCTTCAGGACCATGAGAAACAGCTCCACCTGAAGCTTACCTGAAACCGTGTCTCCTTTCAGATGCAATAAATCTTTTCATTTGTTGGAAAAATGTTTGTTTCCTCCTGATAGCAGCAGTGGAAGGTTACACCAGTA</dnaseq>| | sequence = <dnaseq>gaaactgtatttatgaaaaagaatacaaaattccaattacaaaattGAACATGCATTAAATATCTCCATGGAGAAACTGCAGCAGCAACAGTACAAGTGAGGGTATGCTATATTCAATTAGCCATGAACATTTGAGAGCAACTTTATCCAGATCAACGAAAGAGAAGTGATAGGTGTGCACAACTATGTCAAATGGTGACTGTGGGCATTGCATGCACCTGCCACCTCAAACTACCTGAGGTCATGCTGCTGGCCCCACCAGCTGCAAGCTAGAAAAAGCGTGTGCCAAAGTGGCTGTGCCAGCCAGGGAAGAGGGGCCACAAGAACTTAGAGCTAACCAGACTGACTGTCTGACATTTTGTAGAGATATCTTCAGGACCATGAGAAACAGCTCCACCTGAAGCTTACCTGAAACCGTGTCTCCTTTCAGATGCAATAAATCTTTTCATTTGTTGGAAAAATGTTTGTTTCCTCCTGATAGCAGCAGTGGAAGGTTACACCAGTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG050581]] |
Revision as of 09:58, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT127382 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
505 nt |
| Genomic location |
chr8+:80432380..80432884 |
| Exon number |
1 |
| Exons |
80432380..80432884 |
| Genome context |
|
| Sequence |
000001 gaaactgtat ttatgaaaaa gaatacaaaa ttccaattac aaaattGAAC ATGCATTAAA TATCTCCATG GAGAAACTGC 000080
000081 AGCAGCAACA GTACAAGTGA GGGTATGCTA TATTCAATTA GCCATGAACA TTTGAGAGCA ACTTTATCCA GATCAACGAA 000160 000161 AGAGAAGTGA TAGGTGTGCA CAACTATGTC AAATGGTGAC TGTGGGCATT GCATGCACCT GCCACCTCAA ACTACCTGAG 000240 000241 GTCATGCTGC TGGCCCCACC AGCTGCAAGC TAGAAAAAGC GTGTGCCAAA GTGGCTGTGC CAGCCAGGGA AGAGGGGCCA 000320 000321 CAAGAACTTA GAGCTAACCA GACTGACTGT CTGACATTTT GTAGAGATAT CTTCAGGACC ATGAGAAACA GCTCCACCTG 000400 000401 AAGCTTACCT GAAACCGTGT CTCCTTTCAG ATGCAATAAA TCTTTTCATT TGTTGGAAAA ATGTTTGTTT CCTCCTGATA 000480 000481 GCAGCAGTGG AAGGTTACAC CAGTA |
Predicted Small Protein
| Name | NONHSAT127382_smProtein_104:169 |
| Length | 22 |
| Molecular weight | 2487.8324 |
| Aromaticity | 0.047619047619 |
| Instability index | 45.2 |
| Isoelectric point | 9.69415283203 |
| Runs | 5 |
| Runs residual | 0.00816326530612 |
| Runs probability | 0.0100865571454 |
| Amino acid sequence | MLYSISHEHLRATLSRSTKEK |
| Secondary structure | LLEELLHHHHHHHHHHHHLLL |
| PRMN | - |
| PiMo | - |
