Difference between revisions of "NONHSAT087421"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CTGGCAGAGGCCTTGGGGAGCTCAAAAGGATGGCACTGGGGGTGCATGACTGTTCATGAAGCCAAAGAGAAATAAAAAGAGGCAGCAGAAGGAACTTTCTTCATGTGAGATAGTTCAAGTTCAGACTTCCTGCTAACAACATCTATTAGGACATGGGCTGGACCAACTCATCTTCCTATGGAATACCAAGACAGGAGATCCAGACAAACTCCATCATGTGCACCAAGCCCAAGCTCAAACAATCAGCTGGTGCAGCATGTCTGCTGAATGACTGTGCTGTGATGGGCTAGGACCAGCAGGCGGCCCAGGGGCCCTAGACTGCTCTGTTCACCTCCATCCAACCACATCGCTCTGCACACCAGGCACCATCTCTGTAGGCTCACCACTAACAAAGGGACCGGTACCATCTGAGGACTGCCTTTACCAACAAGACTAAAAGATTTCTTGGAAGAATATCAATTCCAG</dnaseq>| | sequence = <dnaseq>CTGGCAGAGGCCTTGGGGAGCTCAAAAGGATGGCACTGGGGGTGCATGACTGTTCATGAAGCCAAAGAGAAATAAAAAGAGGCAGCAGAAGGAACTTTCTTCATGTGAGATAGTTCAAGTTCAGACTTCCTGCTAACAACATCTATTAGGACATGGGCTGGACCAACTCATCTTCCTATGGAATACCAAGACAGGAGATCCAGACAAACTCCATCATGTGCACCAAGCCCAAGCTCAAACAATCAGCTGGTGCAGCATGTCTGCTGAATGACTGTGCTGTGATGGGCTAGGACCAGCAGGCGGCCCAGGGGCCCTAGACTGCTCTGTTCACCTCCATCCAACCACATCGCTCTGCACACCAGGCACCATCTCTGTAGGCTCACCACTAACAAAGGGACCGGTACCATCTGAGGACTGCCTTTACCAACAAGACTAAAAGATTTCTTGGAAGAATATCAATTCCAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intronic(AS)]] | + | [[Category:Intronic(AS)]][[Category:NONHSAG034221]] |
Revision as of 10:25, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT087421 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intronic(AS) |
| Length |
465 nt |
| Genomic location |
chr22+:50210896..50211360 |
| Exon number |
1 |
| Exons |
50210896..50211360 |
| Genome context |
|
| Sequence |
000001 CTGGCAGAGG CCTTGGGGAG CTCAAAAGGA TGGCACTGGG GGTGCATGAC TGTTCATGAA GCCAAAGAGA AATAAAAAGA 000080
000081 GGCAGCAGAA GGAACTTTCT TCATGTGAGA TAGTTCAAGT TCAGACTTCC TGCTAACAAC ATCTATTAGG ACATGGGCTG 000160 000161 GACCAACTCA TCTTCCTATG GAATACCAAG ACAGGAGATC CAGACAAACT CCATCATGTG CACCAAGCCC AAGCTCAAAC 000240 000241 AATCAGCTGG TGCAGCATGT CTGCTGAATG ACTGTGCTGT GATGGGCTAG GACCAGCAGG CGGCCCAGGG GCCCTAGACT 000320 000321 GCTCTGTTCA CCTCCATCCA ACCACATCGC TCTGCACACC AGGCACCATC TCTGTAGGCT CACCACTAAC AAAGGGACCG 000400 000401 GTACCATCTG AGGACTGCCT TTACCAACAA GACTAAAAGA TTTCTTGGAA GAATATCAAT TCCAG |
Predicted Small Protein
| Name | NONHSAT087421_smProtein_152:289 |
| Length | 46 |
| Molecular weight | 4805.5365 |
| Aromaticity | 0.0444444444444 |
| Instability index | 46.7822222222 |
| Isoelectric point | 8.60931396484 |
| Runs | 9 |
| Runs residual | 0.0377525252525 |
| Runs probability | 0.031060472237 |
| Amino acid sequence | MGWTNSSSYGIPRQEIQTNSIMCTKPKLKQSAGAACLLNDCAVMG |
| Secondary structure | LLLLLLLLLLLLLLEEEELEEEEELLLHHHLHHHHHHHHLLLLLL |
| PRMN | - |
| PiMo | - |
