Difference between revisions of "NONHSAT128964"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>AGAGACCAAGGCCAGGCAGTCCAAAGCAGATATTCAGGGTTATGTTTTAAGGGAGGGTCATCCCAGCAACCTACTTGGAGTTGCATTTCAATGTCATGGAAGCCAAAGTTATGATACTTGGCTTTTCTAGTCACAAAAGTGTCTGTATCCTCTTCATGATCTTAGCTGCTTTTTTTCATACTTACAGACATAATTCAccaggcacggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcacttgagctcaggagttcaggaccagcctgggaaacatgTTGCCCTCAAATTGGCTGTAGCCACACGGATATAAGAAAGTCAGATCTTATCCAGGATGAAGCACTTAGAAGGGCAATTGAGAACCATAACAAGAAAAGACATCGTCATTCCGAGTAGGAAAAGCCACCTGCCTGCAGGGACACCAGCAGCCTACCTCCTACCCCAGCTGTCTGTTGAGAGCAGTGCTGACCCCAGCAGTTAGGGACTGGCTGCATAGCATACTTGTTGGGGGTAAAACTTGTTGCTTTTATGTGTGCTTGAAAACATTTTTCAAAGTTACACAACAGAAATGCAATCATATTGTTTATTTTTAAGTGTTCTATAATGTTAAATAAAACTTTGATCATC</dnaseq>| | sequence = <dnaseq>AGAGACCAAGGCCAGGCAGTCCAAAGCAGATATTCAGGGTTATGTTTTAAGGGAGGGTCATCCCAGCAACCTACTTGGAGTTGCATTTCAATGTCATGGAAGCCAAAGTTATGATACTTGGCTTTTCTAGTCACAAAAGTGTCTGTATCCTCTTCATGATCTTAGCTGCTTTTTTTCATACTTACAGACATAATTCAccaggcacggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggtggatcacttgagctcaggagttcaggaccagcctgggaaacatgTTGCCCTCAAATTGGCTGTAGCCACACGGATATAAGAAAGTCAGATCTTATCCAGGATGAAGCACTTAGAAGGGCAATTGAGAACCATAACAAGAAAAGACATCGTCATTCCGAGTAGGAAAAGCCACCTGCCTGCAGGGACACCAGCAGCCTACCTCCTACCCCAGCTGTCTGTTGAGAGCAGTGCTGACCCCAGCAGTTAGGGACTGGCTGCATAGCATACTTGTTGGGGGTAAAACTTGTTGCTTTTATGTGTGCTTGAAAACATTTTTCAAAGTTACACAACAGAAATGCAATCATATTGTTTATTTTTAAGTGTTCTATAATGTTAAATAAAACTTTGATCATC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG051215]] |
Revision as of 10:34, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT128964 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
645 nt |
| Genomic location |
chr8+:126375268..126379358 |
| Exon number |
2 |
| Exons |
126375268..126375563,126379010..126379358 |
| Genome context |
|
| Sequence |
000001 AGAGACCAAG GCCAGGCAGT CCAAAGCAGA TATTCAGGGT TATGTTTTAA GGGAGGGTCA TCCCAGCAAC CTACTTGGAG 000080
000081 TTGCATTTCA ATGTCATGGA AGCCAAAGTT ATGATACTTG GCTTTTCTAG TCACAAAAGT GTCTGTATCC TCTTCATGAT 000160 000161 CTTAGCTGCT TTTTTTCATA CTTACAGACA TAATTCAcca ggcacggtgg ctcatgcctg taatcccagc actttgggag 000240 000241 gccaaggcag gtggatcact tgagctcagg agttcaggac cagcctggga aacatgTTGC CCTCAAATTG GCTGTAGCCA 000320 000321 CACGGATATA AGAAAGTCAG ATCTTATCCA GGATGAAGCA CTTAGAAGGG CAATTGAGAA CCATAACAAG AAAAGACATC 000400 000401 GTCATTCCGA GTAGGAAAAG CCACCTGCCT GCAGGGACAC CAGCAGCCTA CCTCCTACCC CAGCTGTCTG TTGAGAGCAG 000480 000481 TGCTGACCCC AGCAGTTAGG GACTGGCTGC ATAGCATACT TGTTGGGGGT AAAACTTGTT GCTTTTATGT GTGCTTGAAA 000560 000561 ACATTTTTCA AAGTTACACA ACAGAAATGC AATCATATTG TTTATTTTTA AGTGTTCTAT AATGTTAAAT AAAACTTTGA 000640 000641 TCATC |
Predicted Small Protein
| Name | NONHSAT128964_smProtein_95:262 |
| Length | 56 |
| Molecular weight | 6036.0213 |
| Aromaticity | 0.109090909091 |
| Instability index | 58.4763636364 |
| Isoelectric point | 9.38433837891 |
| Runs | 9 |
| Runs residual | 0.0121212121212 |
| Runs probability | 0.0709434925121 |
| Amino acid sequence | MEAKVMILGFSSHKSVCILFMILAAFFHTYRHNSPGTVAHACNPSTLGGQGRWIT |
| Secondary structure | LEEEEEEEEELLLHHHHHHHHHHHHHHHHHLLLLLLLEEEEELLLLLLLLLEEEL |
| PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL |
| PiMo | iiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooooooooo |
