Difference between revisions of "NONHSAT036319"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>TTACACGGATCACGACTTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGAGGAGTGATTTGAAGCCatagtggaagactgagcctctataaaaaatgaacgaggacactcttaatggacagatacaaaacaagccccaggagaaaGGTGTTGTTATGTCCAAagccatcttgccatgcgcagcctgagaatggagccaatgactgagggtggcagagcagaaagatgAGATAAATGGTACGAGGCTGATATGGGAGCATCCATCACTGACTACCaggttgctactcccagctcctgtcttcacatctgcataccaaccagtaagaagaggagaaggagcaaggagagcacataactttccttttaaggacacaactagatgccatgttgtgagctgctctgtggagggggacctgtggcgaggaactgagggcagccagcaggcaacagccagctgccatgttgtgagtagccctatggaggggcccacatggcaaggaactgac</dnaseq>|
 
sequence = <dnaseq>TTACACGGATCACGACTTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGAGGAGTGATTTGAAGCCatagtggaagactgagcctctataaaaaatgaacgaggacactcttaatggacagatacaaaacaagccccaggagaaaGGTGTTGTTATGTCCAAagccatcttgccatgcgcagcctgagaatggagccaatgactgagggtggcagagcagaaagatgAGATAAATGGTACGAGGCTGATATGGGAGCATCCATCACTGACTACCaggttgctactcccagctcctgtcttcacatctgcataccaaccagtaagaagaggagaaggagcaaggagagcacataactttccttttaaggacacaactagatgccatgttgtgagctgctctgtggagggggacctgtggcgaggaactgagggcagccagcaggcaacagccagctgccatgttgtgagtagccctatggaggggcccacatggcaaggaactgac</dnaseq>|
 
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[[Category:Overlapping(S)]]
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[[Category:Overlapping(S)]][[Category:NONHSAG014666]]

Revision as of 11:17, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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You can also add sub-section(s) at will.

Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT036319

Source

NONCODE4.0

Same with

,

Classification

overlapping(S)

Length

575 nt

Genomic location

chr14-:34454587..34931980

Exon number

5

Exons

34454587..34454713,34456218..34456368,34561527..34561608,34638697..34638852,34931922..34931980

Genome context

Sequence
000001 TTACACGGAT CACGACTTGA TTAATGCTTG TCTCCCAGCT AGGCCGCCAG CTGCACAAGC AGCTACCAGG AGGCAGCCTG 000080
000081 AACGTGTCAG GGCCTGGGCA CGACACTTGC CTTTCTTGGA GGAGTGATTT GAAGCCatag tggaagactg agcctctata 000160
000161 aaaaatgaac gaggacactc ttaatggaca gatacaaaac aagccccagg agaaaGGTGT TGTTATGTCC AAagccatct 000240
000241 tgccatgcgc agcctgagaa tggagccaat gactgagggt ggcagagcag aaagatgAGA TAAATGGTAC GAGGCTGATA 000320
000321 TGGGAGCATC CATCACTGAC TACCaggttg ctactcccag ctcctgtctt cacatctgca taccaaccag taagaagagg 000400
000401 agaaggagca aggagagcac ataactttcc ttttaaggac acaactagat gccatgttgt gagctgctct gtggaggggg 000480
000481 acctgtggcg aggaactgag ggcagccagc aggcaacagc cagctgccat gttgtgagta gccctatgga ggggcccaca 000560
000561 tggcaaggaa ctgac
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Predicted Small Protein

Name NONHSAT036319_smProtein_23:139
Length 39
Molecular weight 4113.6814
Aromaticity 0.0263157894737
Instability index 49.1
Isoelectric point 9.30267333984
Runs 7
Runs residual 0.0115997229917
Runs probability 0.0437580437581
Amino acid sequence MLVSQLGRQLHKQLPGGSLNVSGPGHDTCLSWRSDLKP
Secondary structure LHHHHHHHHHHHHLLLLLEELLLLLLLLLLLEEELLLL
PRMN -
PiMo -