Difference between revisions of "Lnc-AQP2-1:2"

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sequence = <dnaseq>AGACAAAGCCATATATGATTGAAGGTTATCAGTACTGTGCTTTTGGAGGATTCAGAAGAAGTTATATCTGATTGGGAGATTGAAAAGGATTGGCCTGAAGGAGAGGTGGTTTTTGAACTGCATCTTAAAGGATGAGGAAACTGAGGCTGAGAGGGTAGAGAACTTTGCCTGAGGTCACTCAGCAGGTAGGTGGTGGAGCCAGGGGTGTAACCCGGGCTGCGGGCCTCCACATCAGATACAGACAGAACAGGAAGGTGTTGCAGAGGCTGGCGATGCTGCGATTCTCTGGGTAGCAAAGGGAGGGGACATTCCCAGCAGAAGGAACGGTTTGTGTAAAGGTGTGGAGGTGTGATACGGTGTGGCCTGTTCAGGGTGGTGACTAACAGTGGCCAGAGTGAAGGGTGTGTAGAGAGGAGTGCCAGCAGATGAGGCAAGGGGCTGGGGACTGGGGCCAAGGTGGAAGAACTTCAGGTTCCAGGCCAAGGAAATGAACTTTGTCCTTGGGTAGAGGGGTGCCACAGGAGGCATTGAACAAGAGTGCAACCTTGGGTTTGTATGGTGAGCCTCCAGCAATACCTTGGCAGGTGGGATCCTCATGTCCACCCCGGGTGCCAGCCACATTTTACAGGCTGGGAAACAGAATGGTTATGAGACCGGCTCAGACCACACAGCAATAGACAACTGGCCCCAAGCCAGTTCTCTCGTTGTCACAGGACGTTGCTTCGAAACTCAGGTCATAGTGAGAAAGGCAGGGGCATCCTTCCGTTCCTCACTTCTCCAGCCCTGTGCCTGCTCAGCTCACTGGAGAACGTGAAATGAAGATCAACTGGACCGAGGCCCAGGCATATCTGCTCACCAAGAATAAGACAGAAAACAATAAAAGCAAATCATGGAGCTCCAGCTATGTGCTAGGCACTGGGCTGGGAGGAAACTAAACAGAGAACAACAGTGCCAGGCACTCTCTCTGATAATGAGTGTTCTGGACTGAGGGTCCCCCAGACTGGCCTAGGAGGTGCTGTCCAATCCGCCTGAAGAGCTGGAATGGGCTCCAAGTGGAGAGAACTGTGGGATTGCTGGCTCAGCCCCCAACTATGCAGTGACCTTGGACGGAGCGGGCCCTCTGGGAGCCTTGGCAAGCCAGTTGCTAAGAGGGGAGACTGCACCAGAGAAGGGATTTTTAATATATGAAACCTTGGGGAGCTCCTCAAGCTGACTCGGGAGGTCTGGGGTAGGGACTCTGATTGGGGTGTTTTGACAAGTTCCACCGGAAACTCGGAAAGCACACCTGGTTAGAAATAACTAGATGATCAAGGTCCTTCCAGATTCAGTTCAACAAATTCAACACAACACATGTTTACTGAGCACACACCATGCCAGGTGCCATTCTGCAATGTTAGGATACATCAGTGAGCAAAATAACAAAAAGTTCTAGAAGTTAGAGATACTGTGGACAGGGGAAAGCGGTGCTAGGCAAGGTGGTGAGGAGGGCAGGGATGTGGCAGTTCCAGGACTCAGCAGGATGGGCAGGGCTGGCCTTGTTGAGAAGGAGACTGGAAAAAGCAAGGGAGCCAACTGAGTGACATTTGGGGGAAGAGCATTCCAAGCAGTCAACAGCAAGAGCAAAGGCCCTGACAGGGAGCACGCAGGCAGGGTGGCCAGCGTGGCTGGAGCGGAGTGGCCAAGGGCTGGGGTGGGGTGAGGGGCAGGGGCCAGCTGTGGAATGCTGCTCCTACGTGCTAGTGTTCTAAGACTCATTCAGCACTGCCCTGAGTATCTTGACTCTGAACCTGTCCCTGCCCTGACCCCTTCCCCAATCAACTTTAATTTTAGGGACCCACCCATCACAGTAAATGCCAGCACTGCTGATGCCAAAACAATGTTATTTGTAGGCCCTCGGAATTTGTGACCTGAAGGAAGAAGAGCAGGGCCGTGGGAAGTATGTAACCAGTGTCATGCCCCTGGTCCCAAGGAAGCAGTGGCTTGGTAAAGAGGGGACCCCCGTCAATAACTCCCTGTAATTACTGGGCACCCACTCTGAGCTCCTCAGTGGAATCCTAAGGTTAATAAGACTGTCTCTAGCCACTGGGGCTCCCAGCCTGGAGTGAGGTAAGAGGAGTGGAGCCGGCTGGGGAGGGAGACGAACACATACACAGAAGATTCAGACACACTTGCAATGTATTGCTGGGGATTCTCCAGCATTGGCATGATGGAGAGGGTGGAGAATCATTTGACCGCCTCCGCCTAGGATTGCAGAGTTCAGCTGGCCATCATCCACCAGCCGGGGGACTGTGCACATCAGTTAACCTCTCCTCTCAGGCCTTGAAAAGCACCAGGCTTAGTACACGTTTGTTAAATGAATGCACTGCAGTTTTTTTGCTTGTTAAAGGCAGGTAATAATAATGATATTGCTGACTAAGGGCTCCCATCCACTCCCAGTGAGCCCGGTGCCCCCCCGGGCCTCCTCAGTGAGCTGAGGAGGCTCAGCAGTGCCTGCACGTCCCCTCGCCACAATGTCATGTGCCACCTCTTCAAAGGAGGGATGTACCAGCTAGTGGACGTGACCTTGACTGCAAAGGGCGGCACGCAGCTGATGTAATGGTCGCTTAAGTGTTCACAAATGCCTGAACACCCTGTCCTACCTGGTCCTACCTGGATGCTGGCCTCAGTAAGCTCCTGGGCTCATTGAAGATGAACCTAGCAGTAGTATTTACACCACTTGTTGTGTGCCCACTGTGGGCCCGGCGCCATGCCGAGTGCTCTATGGATGTGAGGCACTGTGTTAGGATTCACTGAGTTGTCACAAAAATCCTGCAAAGTTCATTCTCGAGGACGCTCTGGAATTTAAATACCTTGCCAAGATCATACAGATTAAGTGGTGGAGCAGGGATTTGAACGGAGAGAAACGGAGGCCCAGAAAGCAGAAATGATGTGTTAAGATCACTCATCAAGCTGATGGTACAGAGGTTAGAGCCTCTGCTCCCTGCTCTACCTCTTTCCCTTACTCCACATCCATGCCTGTCTCTTCCAATGGGTCGGCATCCACCCTGACACATTAAAGCCAAAAGGAACCTTAAGCTAGGGAAGGGGCTCCAGAACTTTAGTGAAAGATTCAAACATGTCCACTCAACTCAATGGAGAAAATACAATATTCAA</dnaseq>|
 
sequence = <dnaseq>AGACAAAGCCATATATGATTGAAGGTTATCAGTACTGTGCTTTTGGAGGATTCAGAAGAAGTTATATCTGATTGGGAGATTGAAAAGGATTGGCCTGAAGGAGAGGTGGTTTTTGAACTGCATCTTAAAGGATGAGGAAACTGAGGCTGAGAGGGTAGAGAACTTTGCCTGAGGTCACTCAGCAGGTAGGTGGTGGAGCCAGGGGTGTAACCCGGGCTGCGGGCCTCCACATCAGATACAGACAGAACAGGAAGGTGTTGCAGAGGCTGGCGATGCTGCGATTCTCTGGGTAGCAAAGGGAGGGGACATTCCCAGCAGAAGGAACGGTTTGTGTAAAGGTGTGGAGGTGTGATACGGTGTGGCCTGTTCAGGGTGGTGACTAACAGTGGCCAGAGTGAAGGGTGTGTAGAGAGGAGTGCCAGCAGATGAGGCAAGGGGCTGGGGACTGGGGCCAAGGTGGAAGAACTTCAGGTTCCAGGCCAAGGAAATGAACTTTGTCCTTGGGTAGAGGGGTGCCACAGGAGGCATTGAACAAGAGTGCAACCTTGGGTTTGTATGGTGAGCCTCCAGCAATACCTTGGCAGGTGGGATCCTCATGTCCACCCCGGGTGCCAGCCACATTTTACAGGCTGGGAAACAGAATGGTTATGAGACCGGCTCAGACCACACAGCAATAGACAACTGGCCCCAAGCCAGTTCTCTCGTTGTCACAGGACGTTGCTTCGAAACTCAGGTCATAGTGAGAAAGGCAGGGGCATCCTTCCGTTCCTCACTTCTCCAGCCCTGTGCCTGCTCAGCTCACTGGAGAACGTGAAATGAAGATCAACTGGACCGAGGCCCAGGCATATCTGCTCACCAAGAATAAGACAGAAAACAATAAAAGCAAATCATGGAGCTCCAGCTATGTGCTAGGCACTGGGCTGGGAGGAAACTAAACAGAGAACAACAGTGCCAGGCACTCTCTCTGATAATGAGTGTTCTGGACTGAGGGTCCCCCAGACTGGCCTAGGAGGTGCTGTCCAATCCGCCTGAAGAGCTGGAATGGGCTCCAAGTGGAGAGAACTGTGGGATTGCTGGCTCAGCCCCCAACTATGCAGTGACCTTGGACGGAGCGGGCCCTCTGGGAGCCTTGGCAAGCCAGTTGCTAAGAGGGGAGACTGCACCAGAGAAGGGATTTTTAATATATGAAACCTTGGGGAGCTCCTCAAGCTGACTCGGGAGGTCTGGGGTAGGGACTCTGATTGGGGTGTTTTGACAAGTTCCACCGGAAACTCGGAAAGCACACCTGGTTAGAAATAACTAGATGATCAAGGTCCTTCCAGATTCAGTTCAACAAATTCAACACAACACATGTTTACTGAGCACACACCATGCCAGGTGCCATTCTGCAATGTTAGGATACATCAGTGAGCAAAATAACAAAAAGTTCTAGAAGTTAGAGATACTGTGGACAGGGGAAAGCGGTGCTAGGCAAGGTGGTGAGGAGGGCAGGGATGTGGCAGTTCCAGGACTCAGCAGGATGGGCAGGGCTGGCCTTGTTGAGAAGGAGACTGGAAAAAGCAAGGGAGCCAACTGAGTGACATTTGGGGGAAGAGCATTCCAAGCAGTCAACAGCAAGAGCAAAGGCCCTGACAGGGAGCACGCAGGCAGGGTGGCCAGCGTGGCTGGAGCGGAGTGGCCAAGGGCTGGGGTGGGGTGAGGGGCAGGGGCCAGCTGTGGAATGCTGCTCCTACGTGCTAGTGTTCTAAGACTCATTCAGCACTGCCCTGAGTATCTTGACTCTGAACCTGTCCCTGCCCTGACCCCTTCCCCAATCAACTTTAATTTTAGGGACCCACCCATCACAGTAAATGCCAGCACTGCTGATGCCAAAACAATGTTATTTGTAGGCCCTCGGAATTTGTGACCTGAAGGAAGAAGAGCAGGGCCGTGGGAAGTATGTAACCAGTGTCATGCCCCTGGTCCCAAGGAAGCAGTGGCTTGGTAAAGAGGGGACCCCCGTCAATAACTCCCTGTAATTACTGGGCACCCACTCTGAGCTCCTCAGTGGAATCCTAAGGTTAATAAGACTGTCTCTAGCCACTGGGGCTCCCAGCCTGGAGTGAGGTAAGAGGAGTGGAGCCGGCTGGGGAGGGAGACGAACACATACACAGAAGATTCAGACACACTTGCAATGTATTGCTGGGGATTCTCCAGCATTGGCATGATGGAGAGGGTGGAGAATCATTTGACCGCCTCCGCCTAGGATTGCAGAGTTCAGCTGGCCATCATCCACCAGCCGGGGGACTGTGCACATCAGTTAACCTCTCCTCTCAGGCCTTGAAAAGCACCAGGCTTAGTACACGTTTGTTAAATGAATGCACTGCAGTTTTTTTGCTTGTTAAAGGCAGGTAATAATAATGATATTGCTGACTAAGGGCTCCCATCCACTCCCAGTGAGCCCGGTGCCCCCCCGGGCCTCCTCAGTGAGCTGAGGAGGCTCAGCAGTGCCTGCACGTCCCCTCGCCACAATGTCATGTGCCACCTCTTCAAAGGAGGGATGTACCAGCTAGTGGACGTGACCTTGACTGCAAAGGGCGGCACGCAGCTGATGTAATGGTCGCTTAAGTGTTCACAAATGCCTGAACACCCTGTCCTACCTGGTCCTACCTGGATGCTGGCCTCAGTAAGCTCCTGGGCTCATTGAAGATGAACCTAGCAGTAGTATTTACACCACTTGTTGTGTGCCCACTGTGGGCCCGGCGCCATGCCGAGTGCTCTATGGATGTGAGGCACTGTGTTAGGATTCACTGAGTTGTCACAAAAATCCTGCAAAGTTCATTCTCGAGGACGCTCTGGAATTTAAATACCTTGCCAAGATCATACAGATTAAGTGGTGGAGCAGGGATTTGAACGGAGAGAAACGGAGGCCCAGAAAGCAGAAATGATGTGTTAAGATCACTCATCAAGCTGATGGTACAGAGGTTAGAGCCTCTGCTCCCTGCTCTACCTCTTTCCCTTACTCCACATCCATGCCTGTCTCTTCCAATGGGTCGGCATCCACCCTGACACATTAAAGCCAAAAGGAACCTTAAGCTAGGGAAGGGGCTCCAGAACTTTAGTGAAAGATTCAAACATGTCCACTCAACTCAATGGAGAAAATACAATATTCAA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-AQP2-1]]

Revision as of 11:31, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-AQP2-1:2

Source

LNCipedia2.1

Same with

,

Classification

intergenic

Length

3153 nt

Genomic location

chr12+:50305736..50320118

Exon number

6

Exons

50305736..50305866,50315709..50317464,50317565..50318296,50318719..50318870,50319045..50319171,50319864..50320118

Genome context

Sequence
000001 AGACAAAGCC ATATATGATT GAAGGTTATC AGTACTGTGC TTTTGGAGGA TTCAGAAGAA GTTATATCTG ATTGGGAGAT 000080
000081 TGAAAAGGAT TGGCCTGAAG GAGAGGTGGT TTTTGAACTG CATCTTAAAG GATGAGGAAA CTGAGGCTGA GAGGGTAGAG 000160
000161 AACTTTGCCT GAGGTCACTC AGCAGGTAGG TGGTGGAGCC AGGGGTGTAA CCCGGGCTGC GGGCCTCCAC ATCAGATACA 000240
000241 GACAGAACAG GAAGGTGTTG CAGAGGCTGG CGATGCTGCG ATTCTCTGGG TAGCAAAGGG AGGGGACATT CCCAGCAGAA 000320
000321 GGAACGGTTT GTGTAAAGGT GTGGAGGTGT GATACGGTGT GGCCTGTTCA GGGTGGTGAC TAACAGTGGC CAGAGTGAAG 000400
000401 GGTGTGTAGA GAGGAGTGCC AGCAGATGAG GCAAGGGGCT GGGGACTGGG GCCAAGGTGG AAGAACTTCA GGTTCCAGGC 000480
000481 CAAGGAAATG AACTTTGTCC TTGGGTAGAG GGGTGCCACA GGAGGCATTG AACAAGAGTG CAACCTTGGG TTTGTATGGT 000560
000561 GAGCCTCCAG CAATACCTTG GCAGGTGGGA TCCTCATGTC CACCCCGGGT GCCAGCCACA TTTTACAGGC TGGGAAACAG 000640
000641 AATGGTTATG AGACCGGCTC AGACCACACA GCAATAGACA ACTGGCCCCA AGCCAGTTCT CTCGTTGTCA CAGGACGTTG 000720
000721 CTTCGAAACT CAGGTCATAG TGAGAAAGGC AGGGGCATCC TTCCGTTCCT CACTTCTCCA GCCCTGTGCC TGCTCAGCTC 000800
000801 ACTGGAGAAC GTGAAATGAA GATCAACTGG ACCGAGGCCC AGGCATATCT GCTCACCAAG AATAAGACAG AAAACAATAA 000880
000881 AAGCAAATCA TGGAGCTCCA GCTATGTGCT AGGCACTGGG CTGGGAGGAA ACTAAACAGA GAACAACAGT GCCAGGCACT 000960
000961 CTCTCTGATA ATGAGTGTTC TGGACTGAGG GTCCCCCAGA CTGGCCTAGG AGGTGCTGTC CAATCCGCCT GAAGAGCTGG 001040
001041 AATGGGCTCC AAGTGGAGAG AACTGTGGGA TTGCTGGCTC AGCCCCCAAC TATGCAGTGA CCTTGGACGG AGCGGGCCCT 001120
001121 CTGGGAGCCT TGGCAAGCCA GTTGCTAAGA GGGGAGACTG CACCAGAGAA GGGATTTTTA ATATATGAAA CCTTGGGGAG 001200
001201 CTCCTCAAGC TGACTCGGGA GGTCTGGGGT AGGGACTCTG ATTGGGGTGT TTTGACAAGT TCCACCGGAA ACTCGGAAAG 001280
001281 CACACCTGGT TAGAAATAAC TAGATGATCA AGGTCCTTCC AGATTCAGTT CAACAAATTC AACACAACAC ATGTTTACTG 001360
001361 AGCACACACC ATGCCAGGTG CCATTCTGCA ATGTTAGGAT ACATCAGTGA GCAAAATAAC AAAAAGTTCT AGAAGTTAGA 001440
001441 GATACTGTGG ACAGGGGAAA GCGGTGCTAG GCAAGGTGGT GAGGAGGGCA GGGATGTGGC AGTTCCAGGA CTCAGCAGGA 001520
001521 TGGGCAGGGC TGGCCTTGTT GAGAAGGAGA CTGGAAAAAG CAAGGGAGCC AACTGAGTGA CATTTGGGGG AAGAGCATTC 001600
001601 CAAGCAGTCA ACAGCAAGAG CAAAGGCCCT GACAGGGAGC ACGCAGGCAG GGTGGCCAGC GTGGCTGGAG CGGAGTGGCC 001680
001681 AAGGGCTGGG GTGGGGTGAG GGGCAGGGGC CAGCTGTGGA ATGCTGCTCC TACGTGCTAG TGTTCTAAGA CTCATTCAGC 001760
001761 ACTGCCCTGA GTATCTTGAC TCTGAACCTG TCCCTGCCCT GACCCCTTCC CCAATCAACT TTAATTTTAG GGACCCACCC 001840
001841 ATCACAGTAA ATGCCAGCAC TGCTGATGCC AAAACAATGT TATTTGTAGG CCCTCGGAAT TTGTGACCTG AAGGAAGAAG 001920
001921 AGCAGGGCCG TGGGAAGTAT GTAACCAGTG TCATGCCCCT GGTCCCAAGG AAGCAGTGGC TTGGTAAAGA GGGGACCCCC 002000
002001 GTCAATAACT CCCTGTAATT ACTGGGCACC CACTCTGAGC TCCTCAGTGG AATCCTAAGG TTAATAAGAC TGTCTCTAGC 002080
002081 CACTGGGGCT CCCAGCCTGG AGTGAGGTAA GAGGAGTGGA GCCGGCTGGG GAGGGAGACG AACACATACA CAGAAGATTC 002160
002161 AGACACACTT GCAATGTATT GCTGGGGATT CTCCAGCATT GGCATGATGG AGAGGGTGGA GAATCATTTG ACCGCCTCCG 002240
002241 CCTAGGATTG CAGAGTTCAG CTGGCCATCA TCCACCAGCC GGGGGACTGT GCACATCAGT TAACCTCTCC TCTCAGGCCT 002320
002321 TGAAAAGCAC CAGGCTTAGT ACACGTTTGT TAAATGAATG CACTGCAGTT TTTTTGCTTG TTAAAGGCAG GTAATAATAA 002400
002401 TGATATTGCT GACTAAGGGC TCCCATCCAC TCCCAGTGAG CCCGGTGCCC CCCCGGGCCT CCTCAGTGAG CTGAGGAGGC 002480
002481 TCAGCAGTGC CTGCACGTCC CCTCGCCACA ATGTCATGTG CCACCTCTTC AAAGGAGGGA TGTACCAGCT AGTGGACGTG 002560
002561 ACCTTGACTG CAAAGGGCGG CACGCAGCTG ATGTAATGGT CGCTTAAGTG TTCACAAATG CCTGAACACC CTGTCCTACC 002640
002641 TGGTCCTACC TGGATGCTGG CCTCAGTAAG CTCCTGGGCT CATTGAAGAT GAACCTAGCA GTAGTATTTA CACCACTTGT 002720
002721 TGTGTGCCCA CTGTGGGCCC GGCGCCATGC CGAGTGCTCT ATGGATGTGA GGCACTGTGT TAGGATTCAC TGAGTTGTCA 002800
002801 CAAAAATCCT GCAAAGTTCA TTCTCGAGGA CGCTCTGGAA TTTAAATACC TTGCCAAGAT CATACAGATT AAGTGGTGGA 002880
002881 GCAGGGATTT GAACGGAGAG AAACGGAGGC CCAGAAAGCA GAAATGATGT GTTAAGATCA CTCATCAAGC TGATGGTACA 002960
002961 GAGGTTAGAG CCTCTGCTCC CTGCTCTACC TCTTTCCCTT ACTCCACATC CATGCCTGTC TCTTCCAATG GGTCGGCATC 003040
003041 CACCCTGACA CATTAAAGCC AAAAGGAACC TTAAGCTAGG GAAGGGGCTC CAGAACTTTA GTGAAAGATT CAAACATGTC 003120
003121 CACTCAACTC AATGGAGAAA ATACAATATT CAA
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