Difference between revisions of "Lnc-PIK3C3-2:3"

Revision as of 11:32, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-PIK3C3-2:3
Source	LNCipedia2.1
Same with	NONHSAT059028
Classification	intergenic
Length	2676 nt
Genomic location	chr18+:37235808..37245528
Exon number	4
Exons	37235808..37235951,37236410..37236625,37237386..37237455,37243283..37245528
Genome context
Sequence	000001 CAGAGATGCC ACAAAGTTTA ACTTTGGCCT CAGTACTCAG GAAAAGATAT ACTTGGTTTC AGCCTTGGCT TCAGGCTTTG 000080 000081 AAAGACAGAG TAACAAATAG CTACTTCTTT TCTGGCCCCT TCATCATCTG CTTGTTCAAT GGAGCTTAGG CCAGAGTCTT 000160 000161 TCAAGAAAAA AAGTCTTATT AGAGAAGTCT TCATATCTCG TGAGGATGAA TTAAAAGCAG AATCTCAACT TTGCTACCTT 000240 000241 TAAATGTCAC GGAGAGAAAA AACTGCAAAA CCATGTGCAA CAATATCCAT GATAAATCAT CTTTGATCTC AACATAACGG 000320 000321 AGACTATAAG GAGTATAAAG ACTAGAAGAA AGAGTAGAAG GTGATCCACA ATCAATTCAG AACCTGGTCT TCTATGGTGG 000400 000401 CTCACAGTTC CTGCACCCTA CAATATCGTG AATTTTCTTC CTCTTCATCT AATGACATGA ATATGCTCCA GTGGATCCTA 000480 000481 GGATATCTTT CACATGAGGT TACCCTTGCC CTTTGGATGT CAGGTGGAAC AAAGGGATGG AAGATTTTTT GTACTGGGAC 000560 000561 ATTCAGTAAA CCCCTAGGCC TACCTATTGT CTAGTCAGAG TTAGAGAAGC AAATGATGTC TGTGAGGGCC TACAAGGCAC 000640 000641 AAGAGGATGA AAGTTTAACT TAAAGTTTAG ATGCTGATAT TCTAGCTAGT AATAATGTAT GATTGCCTCA TGTACTACTC 000720 000721 TTTTTTTATA TTTCTCTCCT AATGTATAAA GATGGATTTC AAAAGATAGG CAGCCTGGGA TTCAAATTCT GATCATCTTT 000800 000801 TCACTTTGTA AACTAATGGA TATATTTTTT TAAAACATTG TGTTTAATAC ACGCCAATGC CAAAGGCTTT CTACAGACTC 000880 000881 ATGTGGAGTG GGATGATGCC CAGAATGTCG ATAAATTGAC AGAATAATAT GAAGAACCCA ACAGTCATGT GCCATGAATT 000960 000961 CTGCAGGCAC ATTTGGACAT GAGTGTGAGC CAGAAGATCA TTCTATTTGG GAAAATTTAA ATTGGGTGCA AGAAGCATTA 001040 001041 GCTAACAGTC TGAACCGAGG TATGATCCAA ACTGATAAAA CTTGATGAAG TTGGAAGAAG CAAAAGGGAG TTGGTATGGA 001120 001121 TCCTCAGAAT ACGACAGAAA CACAAGGAGT TTCAAGGGCA TTTGACAACA TGAAGTGCCA GCTATATTAG GGCACAGCAG 001200 001201 AAAAAAAATG TTTTCTGGAC AGACTTAATT TCTGAAGTGC CTTCTCCTCT TATACTACCA TGGAAATTAC AGTGTTCTTC 001280 001281 TGCTGTCTCA GCACCTTCCA CATTTAAAAA AAAATCATGC CTTTCCTTAT CTGTCTACCT AATTAGACAT CCATGGATGA 001360 001361 GAAATGTGTC TATGTATCTT CAGTTTCTAT ATGTCCACTA CAATCCTCAT GCCTGGAACA GAGAGGTGTT CAATAAATCC 001440 001441 ATGAACAAAA AGAAACTGAA GTTCTAAGGT CCAAACAATG TTGATTCTTT ATGAGCCAGT AGGGATTTGC CTCTTTCTAA 001520 001521 TTCCTCCTGG AGCACAAGTG TTCCCGGAAT CTGGAGCAGG GTTAAAAGCA GAGATGAATA ATGATCCCCA TTGTAAAGTC 001600 001601 CCAGGGATCC AGATAAGATA ATATGCCCCA CTCCAGGGAG AATATATATA CTTTTTTATT AAGAAGACAC AAGAAATGGA 001680 001681 ATGCAGCCTA TGTTTGTAAG CGGACTTTAA TATTAAGCCC TCAATAAATA TTTGATAAAT GAATGAATGA TTCTGTCCAA 001760 001761 AGAGGTTAAT CATTAAAATG CTCAGAGGAG ACCTCAGCAG GCCCTTGAAG AACACAGCAA TTTAAGAAGT AAAAAGGAGG 001840 001841 ATGTAGGGGA ATGTTAGTCA GGGTCAAGCC AAACATTGAA TTCAGCATGG CAAATGAAAT TTACTGTAAG TGGTCTCTGT 001920 001921 GCTGAGATAC ATATTACTGT TTGTGCAAAT TTAGTTCCGT TAACTTTT

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>CAGAGATGCCACAAAGTTTAACTTTGGCCTCAGTACTCAGGAAAAGATATACTTGGTTTCAGCCTTGGCTTCAGGCTTTGAAAGACAGAGTAACAAATAGCTACTTCTTTTCTGGCCCCTTCATCATCTGCTTGTTCAATGGAGCTTAGGCCAGAGTCTTTCAAGAAAAAAAGTCTTATTAGAGAAGTCTTCATATCTCGTGAGGATGAATTAAAAGCAGAATCTCAACTTTGCTACCTTTAAATGTCACGGAGAGAAAAAACTGCAAAACCATGTGCAACAATATCCATGATAAATCATCTTTGATCTCAACATAACGGAGACTATAAGGAGTATAAAGACTAGAAGAAAGAGTAGAAGGTGATCCACAATCAATTCAGAACCTGGTCTTCTATGGTGGCTCACAGTTCCTGCACCCTACAATATCGTGAATTTTCTTCCTCTTCATCTAATGACATGAATATGCTCCAGTGGATCCTAGGATATCTTTCACATGAGGTTACCCTTGCCCTTTGGATGTCAGGTGGAACAAAGGGATGGAAGATTTTTTGTACTGGGACATTCAGTAAACCCCTAGGCCTACCTATTGTCTAGTCAGAGTTAGAGAAGCAAATGATGTCTGTGAGGGCCTACAAGGCACAAGAGGATGAAAGTTTAACTTAAAGTTTAGATGCTGATATTCTAGCTAGTAATAATGTATGATTGCCTCATGTACTACTCTTTTTTTATATTTCTCTCCTAATGTATAAAGATGGATTTCAAAAGATAGGCAGCCTGGGATTCAAATTCTGATCATCTTTTCACTTTGTAAACTAATGGATATATTTTTTTAAAACATTGTGTTTAATACACGCCAATGCCAAAGGCTTTCTACAGACTCATGTGGAGTGGGATGATGCCCAGAATGTCGATAAATTGACAGAATAATATGAAGAACCCAACAGTCATGTGCCATGAATTCTGCAGGCACATTTGGACATGAGTGTGAGCCAGAAGATCATTCTATTTGGGAAAATTTAAATTGGGTGCAAGAAGCATTAGCTAACAGTCTGAACCGAGGTATGATCCAAACTGATAAAACTTGATGAAGTTGGAAGAAGCAAAAGGGAGTTGGTATGGATCCTCAGAATACGACAGAAACACAAGGAGTTTCAAGGGCATTTGACAACATGAAGTGCCAGCTATATTAGGGCACAGCAGAAAAAAAATGTTTTCTGGACAGACTTAATTTCTGAAGTGCCTTCTCCTCTTATACTACCATGGAAATTACAGTGTTCTTCTGCTGTCTCAGCACCTTCCACATTTAAAAAAAAATCATGCCTTTCCTTATCTGTCTACCTAATTAGACATCCATGGATGAGAAATGTGTCTATGTATCTTCAGTTTCTATATGTCCACTACAATCCTCATGCCTGGAACAGAGAGGTGTTCAATAAATCCATGAACAAAAAGAAACTGAAGTTCTAAGGTCCAAACAATGTTGATTCTTTATGAGCCAGTAGGGATTTGCCTCTTTCTAATTCCTCCTGGAGCACAAGTGTTCCCGGAATCTGGAGCAGGGTTAAAAGCAGAGATGAATAATGATCCCCATTGTAAAGTCCCAGGGATCCAGATAAGATAATATGCCCCACTCCAGGGAGAATATATATACTTTTTTATTAAGAAGACACAAGAAATGGAATGCAGCCTATGTTTGTAAGCGGACTTTAATATTAAGCCCTCAATAAATATTTGATAAATGAATGAATGATTCTGTCCAAAGAGGTTAATCATTAAAATGCTCAGAGGAGACCTCAGCAGGCCCTTGAAGAACACAGCAATTTAAGAAGTAAAAAGGAGGATGTAGGGGAATGTTAGTCAGGGTCAAGCCAAACATTGAATTCAGCATGGCAAATGAAATTTACTGTAAGTGGTCTCTGTGCTGAGATACATATTACTGTTTGTGCAAATTTAGTTCCGTTAACTTTTCCCAAAACTTCTTCACCACCTTATCTTGGAGCTTAATTCTAACTCTCTCTACTATGTCCATACTATGGGAATGTCTTCAAGATAATATTGTCTTGTTAAAATTCGGCTTCAGACTTCAGGACTTTTACATTCTTGGATGGGGATCTAAACAAGACATGAACCAATCATAAGGAAATATGGCTCCTTCTCCATTATTTTAAACAAGAAAATATTATTGTTATTGTAGCTGTTTGAGAGACAAGGAGATTAAACTTGCTACGGTTAAGAAATTTGAAAGCAGATTTTTTTAGAGGCAGACAATAAGGAAGAGTGTTTTTGGACATACTTTGCTCAAACCTTTCCTGTGTTTGAGTATTCCACCCAAACAGAACTTTCTCCATTGAGCCATTTGCTGTCCTGTCAGCTAAAAAATAAAAAATAAAAAAAACAATAAAACAAAACAAAACAAAGAGCAAAAACCATTTTATCTTCTTGATACTGTGGCACTTGATGTGCAACAGAGAGACTACATTCTTGCAATCGGTCAGAAGCAGAACTTGACCAATATGAAACAATACATATCCTAAGAAAACAACATGCACAGATAATTTGCAGAAAGTTTAGAACAACAACAATAAAATATTTTAATTTGCTCTGTATTGCAAAGCTTGTTGCTTTTCATAATGCCTTGATATAACACGTGGGATGAAGAATCTATTTTTTAAAAGA</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-PIK3C3-2]]
+[[Category:Intergenic]][[Category:lnc-PIK3C3-2]][[Category:NONHSAG023733]]