Difference between revisions of "NONHSAT037218"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TAGGATCAACACTGATGTCATTCAAGCAACAGCTAGAAGACCAACTCTGTCTCCGACTTATTGAGTTGAAATGCATTTATTTTTCCACTGTTATGAAAAAATGCAGATTTTCCCCGAAGAAGCATTTTTTTAATTCATCGCTTTTTCTTAAAGCCACGTGACAGAAAGCCAGGGCCCAGATCCTAAGGAGAGGGACCATCATGGcactgtccagatcagcttcttccacatgggagggaaaatggctgctgacggctcccaagcctcaatcccttcacccttgccactgGCAAACTGCGGTTTAGGTTGCTGCCTTGGCAGTCCTGGCTGTCCTCACGGAAGAGCATGTGAACCACGGACCTGGCTGTCTTTTTCATTGGGTTGGCTCTGCGGTGCAGGCTGGCAGATGAGCATGTGATGAGCCCGCCCTTGCTGGCCGTGCAATTCGGCTCCTGTCATGCTCTTGGCCATTGAATCGGCCTAATGCAGCCCCTCAGCAGCCAGCCTGGTGTTCCCTGGGGCTGAGGATCTAATGTCAGCAGGGCATGATTCGATTCACATTAAAGATGGATATTAAGTCTTTTTACTCGGGGTCTTGTCAAGAAAAACAAATCTGCCTGCTATCAAAGGCATAGAAAATGCC</dnaseq>| | sequence = <dnaseq>TAGGATCAACACTGATGTCATTCAAGCAACAGCTAGAAGACCAACTCTGTCTCCGACTTATTGAGTTGAAATGCATTTATTTTTCCACTGTTATGAAAAAATGCAGATTTTCCCCGAAGAAGCATTTTTTTAATTCATCGCTTTTTCTTAAAGCCACGTGACAGAAAGCCAGGGCCCAGATCCTAAGGAGAGGGACCATCATGGcactgtccagatcagcttcttccacatgggagggaaaatggctgctgacggctcccaagcctcaatcccttcacccttgccactgGCAAACTGCGGTTTAGGTTGCTGCCTTGGCAGTCCTGGCTGTCCTCACGGAAGAGCATGTGAACCACGGACCTGGCTGTCTTTTTCATTGGGTTGGCTCTGCGGTGCAGGCTGGCAGATGAGCATGTGATGAGCCCGCCCTTGCTGGCCGTGCAATTCGGCTCCTGTCATGCTCTTGGCCATTGAATCGGCCTAATGCAGCCCCTCAGCAGCCAGCCTGGTGTTCCCTGGGGCTGAGGATCTAATGTCAGCAGGGCATGATTCGATTCACATTAAAGATGGATATTAAGTCTTTTTACTCGGGGTCTTGTCAAGAAAAACAAATCTGCCTGCTATCAAAGGCATAGAAAATGCC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG015153]] |
Revision as of 11:40, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT037218 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
643 nt |
| Genomic location |
chr14+:60789391..60790682 |
| Exon number |
3 |
| Exons |
60789391..60789594,60789910..60789994,60790329..60790682 |
| Genome context |
|
| Sequence |
000001 TAGGATCAAC ACTGATGTCA TTCAAGCAAC AGCTAGAAGA CCAACTCTGT CTCCGACTTA TTGAGTTGAA ATGCATTTAT 000080
000081 TTTTCCACTG TTATGAAAAA ATGCAGATTT TCCCCGAAGA AGCATTTTTT TAATTCATCG CTTTTTCTTA AAGCCACGTG 000160 000161 ACAGAAAGCC AGGGCCCAGA TCCTAAGGAG AGGGACCATC ATGGcactgt ccagatcagc ttcttccaca tgggagggaa 000240 000241 aatggctgct gacggctccc aagcctcaat cccttcaccc ttgccactgG CAAACTGCGG TTTAGGTTGC TGCCTTGGCA 000320 000321 GTCCTGGCTG TCCTCACGGA AGAGCATGTG AACCACGGAC CTGGCTGTCT TTTTCATTGG GTTGGCTCTG CGGTGCAGGC 000400 000401 TGGCAGATGA GCATGTGATG AGCCCGCCCT TGCTGGCCGT GCAATTCGGC TCCTGTCATG CTCTTGGCCA TTGAATCGGC 000480 000481 CTAATGCAGC CCCTCAGCAG CCAGCCTGGT GTTCCCTGGG GCTGAGGATC TAATGTCAGC AGGGCATGAT TCGATTCACA 000560 000561 TTAAAGATGG ATATTAAGTC TTTTTACTCG GGGTCTTGTC AAGAAAAACA AATCTGCCTG CTATCAAAGG CATAGAAAAT 000640 000641 GCC |
Predicted Small Protein
| Name | NONHSAT037218_smProtein_14:160 |
| Length | 49 |
| Molecular weight | 5777.9112 |
| Aromaticity | 0.145833333333 |
| Instability index | 53.4125 |
| Isoelectric point | 9.66448974609 |
| Runs | 7 |
| Runs residual | 0.0197368421053 |
| Runs probability | 0.0103212456154 |
| Amino acid sequence | MSFKQQLEDQLCLRLIELKCIYFSTVMKKCRFSPKKHFFNSSLFLKAT |
| Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLEELLLLEEELL |
| PRMN | - |
| PiMo | - |
