Difference between revisions of "Lnc-SLC39A11-3:6"

Revision as of 11:42, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-SLC39A11-3:6
Source	LNCipedia2.1
Same with	NONHSAT055639
Classification	intergenic
Length	2051 nt
Genomic location	chr17-:70022039..70032010
Exon number	2
Exons	70022039..70022118,70030040..70032010
Genome context
Sequence	000001 AGAAAAATTG ATCTCAAGAG TTTGACCCAC TTACGCCTAG TGTTCCATTA TTGGAATGCT AAGCATGTGG GAGTTATTTA 000080 000081 TATCCTACTG CTCAAGATCA TCACCAAGAT CTGATTGCAA AAATTGCAAC CTCAGGCATA AATGGGTCAA GGTGGTAATC 000160 000161 ACATACTCCT TAGAGAGTGA GCTACTCCCT GAAATTGCTG GCAAAACCCT GTGTTTATGT ACATATGTGT GCTTTTCCCA 000240 000241 CCTTAGGGAT AGAGTTTATC TCTTTCAACA GGTTTTCAAC AGCTTAAAAA CCACTACCAT GGGCGGACAT GGCAGCCCAT 000320 000321 GCAAAGTCAC AAAGGTGTAA TGTAGAGAAC AGCACACTCA TGGGGTCAAC AGTGAGATCA ATGAGAACAC AGAACAGATT 000400 000401 TCTATGGAGG ACAGTGGGAA ATGAAGCTAA ATAAATGTCA CCCAACATCA GAGGGAGCAC CCAGGACGGG GGGTGGGGCA 000480 000481 GAGGTCTGAG GCTGATTCAA TACAGCATAA AGGACTAATT AGTACAAGTA TAGTGAACAA CATCAAGTTA AACAGATGTG 000560 000561 GACTTTGCTC TCAGGTGGCT ACTCCATCAA ATGCAGTTGG TGGACAGGCA AGAAGAACCC AGTTAGCCTG CAGAGAGGCT 000640 000641 GTGGGTTGGC AGTTCATTGT GTTAAGAATA GAAGGGCTGA CCAGATGGTC AACTCTTTTT TTTAATCTTT GCTTTTTAAA 000720 000721 AATTGATCCA AATATTTGTA CTTATTTATG GGGTAGCTAT TATATTTCGT TACATGCATA GACTGTGTAA TGGTCACATC 000800 000801 GGAGTATTTG AAGTGTCCAT AACCATTAGT CTTTATCATT TCTATGTGTG GAACATCTCA GGTCCTCTCT TCTAGGTATT 000880 000881 TTGAAATACA CAATACCTTG TTAACTATAG CAAATAACCA GCTCTTTAAT CATTCCTTGG TCAAATCTCC ATTTCATATA 000960 000961 CCCCTCCAAA CCAAAACAAC ATTGACTAAA TCTGCCTCTG GCCCTGTGAA AGGCCAGCCA AACAGCAAGA GGCCAGCACA 001040 001041 AGACATAGCT TCCTCTTCTA GAGCTGAGAA TTCACTTTTG ATTGTACTGT GGGGCACATA GAACAACATC GAACTCCCAG 001120 001121 GTGATGGGAG GGAGAGTTCC TAGGACTAGG GAAACAGGGC CTATGGATGT GAGGTGTGTG AGGAGGTGGG GTGGGGAGGT 001200 001201 AATGGTTTTC ACTGGATTCC TTTTTATATT TTATTTAGAT TAAGTTCTGC TCAGCAGGGT GATTTCTTAA TTAGAGCTGC 001280 001281 CCAGCCAAGC AGACCTCCAG CTCAAACCCC TGTGCTGCCT TCTAAGGTTT CATGAGGGAC CTTGTCCTGC CTTATTTCCT 001360 001361 GAGTTCTAAT ATTTGAATAG TATGCAGTGG ATTTCAATGG GAGGAAAAGA CATGTAATTT AATCATTGTT ATTAGATTTT 001440 001441 GCCTGTGGAT GGGGAGAGGA GGGGGAAGCA GGAGGGACAT GGGTCCTTTC TTTGTTAATT TTCTTTTTCT TTTTCTCTAC 001520 001521 CTTTCTTCCA GTGGTCAAAG GAAGAGGAGG ATCAATGGCC TTTTTTCCTC CCCCCAACCT TTTTTTTTTT TTTTTTTTTT 001600 001601 AAACAAAGAA GCAAAGTGAG AACATTAAGC CCGAAAGAGA ACTGTGTTCA TTGCAGGACT TTTTGAGGTC TGGTTAAGCC 001680 001681 ATTTATATAA AGAAATTACA CAGTTCCTCT TTGGTAACCT CAATCCTGAA AGTTAGTGTG ACAGGCCTAC AGCTTTTTGT 001760 001761 TCTCTTCATC ACTCCAGAAG TTGCAGACTG CGCTCAGCAA GACCTCACAA CATGGAGGAA AATTAAAGAG ATAAGTGGTC 001840 001841 CATGGAGTAT CCCCTTACCC CACCATAAAT TGGCATAATT TTGTGCACAA TCCAGGGAGA AGAAAAAGAA GACCAGAAGC 001920 001921 TTGCAAACCA TTCGAGAGAA GGAAGGGAGC TTTGTCATGT TGCCATCTGA GGGACCATTT CAGTAGAGCC TTTTAAGACA 002000 002001 CATG

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>AGAAAAATTGATCTCAAGAGTTTGACCCACTTACGCCTAGTGTTCCATTATTGGAATGCTAAGCATGTGGGAGTTATTTATATCCTACTGCTCAAGATCATCACCAAGATCTGATTGCAAAAATTGCAACCTCAGGCATAAATGGGTCAAGGTGGTAATCACATACTCCTTAGAGAGTGAGCTACTCCCTGAAATTGCTGGCAAAACCCTGTGTTTATGTACATATGTGTGCTTTTCCCACCTTAGGGATAGAGTTTATCTCTTTCAACAGGTTTTCAACAGCTTAAAAACCACTACCATGGGCGGACATGGCAGCCCATGCAAAGTCACAAAGGTGTAATGTAGAGAACAGCACACTCATGGGGTCAACAGTGAGATCAATGAGAACACAGAACAGATTTCTATGGAGGACAGTGGGAAATGAAGCTAAATAAATGTCACCCAACATCAGAGGGAGCACCCAGGACGGGGGGTGGGGCAGAGGTCTGAGGCTGATTCAATACAGCATAAAGGACTAATTAGTACAAGTATAGTGAACAACATCAAGTTAAACAGATGTGGACTTTGCTCTCAGGTGGCTACTCCATCAAATGCAGTTGGTGGACAGGCAAGAAGAACCCAGTTAGCCTGCAGAGAGGCTGTGGGTTGGCAGTTCATTGTGTTAAGAATAGAAGGGCTGACCAGATGGTCAACTCTTTTTTTTAATCTTTGCTTTTTAAAAATTGATCCAAATATTTGTACTTATTTATGGGGTAGCTATTATATTTCGTTACATGCATAGACTGTGTAATGGTCACATCGGAGTATTTGAAGTGTCCATAACCATTAGTCTTTATCATTTCTATGTGTGGAACATCTCAGGTCCTCTCTTCTAGGTATTTTGAAATACACAATACCTTGTTAACTATAGCAAATAACCAGCTCTTTAATCATTCCTTGGTCAAATCTCCATTTCATATACCCCTCCAAACCAAAACAACATTGACTAAATCTGCCTCTGGCCCTGTGAAAGGCCAGCCAAACAGCAAGAGGCCAGCACAAGACATAGCTTCCTCTTCTAGAGCTGAGAATTCACTTTTGATTGTACTGTGGGGCACATAGAACAACATCGAACTCCCAGGTGATGGGAGGGAGAGTTCCTAGGACTAGGGAAACAGGGCCTATGGATGTGAGGTGTGTGAGGAGGTGGGGTGGGGAGGTAATGGTTTTCACTGGATTCCTTTTTATATTTTATTTAGATTAAGTTCTGCTCAGCAGGGTGATTTCTTAATTAGAGCTGCCCAGCCAAGCAGACCTCCAGCTCAAACCCCTGTGCTGCCTTCTAAGGTTTCATGAGGGACCTTGTCCTGCCTTATTTCCTGAGTTCTAATATTTGAATAGTATGCAGTGGATTTCAATGGGAGGAAAAGACATGTAATTTAATCATTGTTATTAGATTTTGCCTGTGGATGGGGAGAGGAGGGGGAAGCAGGAGGGACATGGGTCCTTTCTTTGTTAATTTTCTTTTTCTTTTTCTCTACCTTTCTTCCAGTGGTCAAAGGAAGAGGAGGATCAATGGCCTTTTTTCCTCCCCCCAACCTTTTTTTTTTTTTTTTTTTTTAAACAAAGAAGCAAAGTGAGAACATTAAGCCCGAAAGAGAACTGTGTTCATTGCAGGACTTTTTGAGGTCTGGTTAAGCCATTTATATAAAGAAATTACACAGTTCCTCTTTGGTAACCTCAATCCTGAAAGTTAGTGTGACAGGCCTACAGCTTTTTGTTCTCTTCATCACTCCAGAAGTTGCAGACTGCGCTCAGCAAGACCTCACAACATGGAGGAAAATTAAAGAGATAAGTGGTCCATGGAGTATCCCCTTACCCCACCATAAATTGGCATAATTTTGTGCACAATCCAGGGAGAAGAAAAAGAAGACCAGAAGCTTGCAAACCATTCGAGAGAAGGAAGGGAGCTTTGTCATGTTGCCATCTGAGGGACCATTTCAGTAGAGCCTTTTAAGACACATGTTTTGGAATACAGTCAAATGCGTGCTGCTGTATGACCAGCCTATTTG</dnaseq>|
 }}
-[[Category:Intergenic]]
+[[Category:Intergenic]][[Category:lnc-SLC39A11-3]]