Difference between revisions of "NONHSAT091302"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>agagtccagtaagcaataaaagaaaacaatgttggtagaggaaatggacaagtacagcagccacagtatggtgtggttaccagaagcctaggcactcagggatgactgtctgggtaaccccaccaggtttcccagaaaaagagaccaaccagaaacttgaaggagttcttccCAGATGGAATAAATTTACCGTGTGAATCACGTGAATCCAAGGGATGCAAGGATTGGCCTATACTGGATtggatgctctggtatactactcagatttcctcttcagaactaatgcatttatcccccagctatgaaattgttggctgctggcagtctatagctaatgcagtcactggaaattatccttggttgaagggacctaacttgtccaagtctacacctatttccaggaatagttcaatccattgacttgttgatgcaggactacacaggtcaagccttcttgttttgatgtggacaaatctgaagggatatcccagctccagacctcgcataggtctgagctaaagagacctcataggtctgtgtcaatttctgtctttacccagtcctgcttctctcattcctttataggtgttgttctggaacttcc</dnaseq>| | sequence = <dnaseq>agagtccagtaagcaataaaagaaaacaatgttggtagaggaaatggacaagtacagcagccacagtatggtgtggttaccagaagcctaggcactcagggatgactgtctgggtaaccccaccaggtttcccagaaaaagagaccaaccagaaacttgaaggagttcttccCAGATGGAATAAATTTACCGTGTGAATCACGTGAATCCAAGGGATGCAAGGATTGGCCTATACTGGATtggatgctctggtatactactcagatttcctcttcagaactaatgcatttatcccccagctatgaaattgttggctgctggcagtctatagctaatgcagtcactggaaattatccttggttgaagggacctaacttgtccaagtctacacctatttccaggaatagttcaatccattgacttgttgatgcaggactacacaggtcaagccttcttgttttgatgtggacaaatctgaagggatatcccagctccagacctcgcataggtctgagctaaagagacctcataggtctgtgtcaatttctgtctttacccagtcctgcttctctcattcctttataggtgttgttctggaacttcc</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG035796]] |
Revision as of 12:00, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT091302 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
604 nt |
| Genomic location |
chr3+:115156546..115157442 |
| Exon number |
3 |
| Exons |
115156546..115156585,115156720..115156805,115156965..115157442 |
| Genome context |
|
| Sequence |
000001 agagtccagt aagcaataaa agaaaacaat gttggtagag gaaatggaca agtacagcag ccacagtatg gtgtggttac 000080
000081 cagaagccta ggcactcagg gatgactgtc tgggtaaccc caccaggttt cccagaaaaa gagaccaacc agaaacttga 000160 000161 aggagttctt ccCAGATGGA ATAAATTTAC CGTGTGAATC ACGTGAATCC AAGGGATGCA AGGATTGGCC TATACTGGAT 000240 000241 tggatgctct ggtatactac tcagatttcc tcttcagaac taatgcattt atcccccagc tatgaaattg ttggctgctg 000320 000321 gcagtctata gctaatgcag tcactggaaa ttatccttgg ttgaagggac ctaacttgtc caagtctaca cctatttcca 000400 000401 ggaatagttc aatccattga cttgttgatg caggactaca caggtcaagc cttcttgttt tgatgtggac aaatctgaag 000480 000481 ggatatccca gctccagacc tcgcataggt ctgagctaaa gagacctcat aggtctgtgt caatttctgt ctttacccag 000560 000561 tcctgcttct ctcattcctt tataggtgtt gttctggaac ttcc |
Predicted Small Protein
| Name | NONHSAT091302_smProtein_101:196 |
| Length | 32 |
| Molecular weight | 3630.1759 |
| Aromaticity | 0.129032258065 |
| Instability index | 45.1612903226 |
| Isoelectric point | 8.25482177734 |
| Runs | 7 |
| Runs residual | 0.0245295698925 |
| Runs probability | 0.031708178767 |
| Amino acid sequence | MTVWVTPPGFPEKETNQKLEGVLPRWNKFTV |
| Secondary structure | LEEEELLLLLLLLLLLHHHHLLLLLLLLEEL |
| PRMN | - |
| PiMo | - |
