Difference between revisions of "Lnc-ARMC1-1:2"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>GTGTATTGTGCATTGTGAACACCCTTCTCTTCCCACAGAACCATCTAAATTACAACCAAAGGTCTGATCAAAGGATGGCACCCAGTACATGTGCTGAATGACTGAATAGGGGCAGAGTCCCTTCCTGGTCCTGAAACGTGGAAATTGATTATAGCACCATGCAGGAGTTTCCCCACCCAGTGAGCTGGGGCAGAAGAGGGTCTCACTTTGTCACCCAGGCTGGAATGCAGTGGCACAATGTCGGTTCACTTCAACCTCAACCTCCCAGGCTCAAGTGATCCTCCCACCTCAGTCTCCCAAGTAGCTGAAATTACAGGAGCCTACCACCACGTCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCTGGTTTTCAACTCCTGACCTTAGGTGATCCACCTGCCTCAGCCTCCCAAAGAGCTGGGATAAAAGGCGTGAGCCACCGCGCCTGGCCTGATGCCTGTGTGTCATTCTCTTCTTTTCTTTTATAGTCATGTTAACAAAAGGAGATGCACAGAATAGCAACTTTCAGTGAGACTCTACCGAATTGTTGTAGGGCTTGGTAAAAAGTCCCATGTGGGAGAACCTTGAGTGTCCAGTGAGATGAAACACAGATTACTGAACCAGTAATCTGTGTTTTTTATTGGGCAATACTAGTACAGACTTAACCTAGACACAAGACTGTTATAATTCTATAAATTTACAGTATGATTGATATAATAGCAGGTAGAAACCACGTTCCTTGGCGCTAGTATCGAGTACAGTTGAATAACTTTAAAGTGAAAGTTAACATTTCCAATCTAGATTTTGTTATCATGGGGAAAATAATGATTGTGATTGAACAAATCAATGCTCGCATGCAAAATTTTAGGTGGACTTTTCTGAGATCTTGTAGAAAAAAAATAAATTGGGTTTTTATTGTCTAACCACAGATAGAGTAGAGTTTTGTTTTCTGGATCTGTCTAGTAGATTACTAAGCTTCCTTGTCCAGTGTGAATAAATAAGTTTGTGGGGGCATGGGTGATGCAGACAGTTTTAGCAGGACTTGTGTATTTTACTGGGTATGAGAGTAGACTTAGCATAAAGTGCTTGCAATTTCTCTCCACAATTGCTGTGCTGACTGATTCATATTCTGGGAATTAATTTACTACTGAATTCCTGGTTGGTGTTAAGAGAATGGCTTAACTTCTAATGATAAAGCTGAGAAAATAAGGACTTTCTTAACTGAAATGTGTCCTCCTCAGTCTTGTTCTTGTACTGTGCTCTGTCTCTCCATCCATCCTAAGCTCTCTCTAGTCACAACACTTACTCATTCTTCCATAAATAGACTTGTGCCCAAAAGGGGACAGACAAAAGAAGCATGGCAACATGTCTTACAGATTAGCTTTCTCTTTTCTTCCTCTGTCTTCTTTTTTCTGCAATTCTCAACTACTTCCCTGGCTTCAGGAATAATCTCTTATGATGATCATTCTCAAATCAGTTTCTCCAGCCTCTACCTTTCTTTTACATTTCAGTTCTCAATTCTCATTTTGTAGGTATCTCAAACACAACATATCTAAAATCAATTTTATTCCCTGCTATTCCCCTGCTCCTCCACCTTTCAATCCCTCTCCCACCCTGCTCCCACTCCTGAAATTCCATTTTCATGTAAAGGCTTCACCACCCGCCTCCTCACTCTACTCAACCTTTTGTAAAACCTCTCTCATCTCCATTTCCAGTTAGTTTCCAAGTCCAGTCAATTTTACATGATATCCTACATGGACTCGTTCACTGAGCTTAATTATTATTAGCAAACATTAACGCATATTGTGTTATTTCTACAGAAATCAGCAAAAGGTCCTGGGGTATCCTCTGTGTGGAAAATAACCATGATGCATCTTCAGTGTTGTAGTCTGACTCTATCACCCAGGCTGGAGTGCAGTGTGGCTGGAGGTGAAGTTCAGAGATACGGTGTCTTTCCTGAGTTGTGCAGCTCACGCATGGAGGGATCAGGATGGGAACTGAAGCCTGCATGGCTCAAAGTCTTTGCTTTGAAGTGCTGCAAATATGGCTTCCTGAGGAGGACTGCCCTGGACTGCAAATTTGTATTACACAGACAATACCTTTTCCCAGTGCCTTCTTCTGGACTTATGTCTATGTATTTAGTAAATAACTTATGAGTTTGTTTTTAAAAAACCTATTGAGGGCTGGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGATCACTTGAGGTCAGTAGTTCGAGACCCACCTGGACAACATAGTGAAACCCTGTCTCTACTAAGAATATAAAAATTAGCTGGGTATGGTGGCACACGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAAGCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGACTCTGTCTCAAAAAAACAAAACAAAACAAAACAAAAAAGCAAAAAAC</dnaseq>|
 
sequence = <dnaseq>GTGTATTGTGCATTGTGAACACCCTTCTCTTCCCACAGAACCATCTAAATTACAACCAAAGGTCTGATCAAAGGATGGCACCCAGTACATGTGCTGAATGACTGAATAGGGGCAGAGTCCCTTCCTGGTCCTGAAACGTGGAAATTGATTATAGCACCATGCAGGAGTTTCCCCACCCAGTGAGCTGGGGCAGAAGAGGGTCTCACTTTGTCACCCAGGCTGGAATGCAGTGGCACAATGTCGGTTCACTTCAACCTCAACCTCCCAGGCTCAAGTGATCCTCCCACCTCAGTCTCCCAAGTAGCTGAAATTACAGGAGCCTACCACCACGTCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACTATGTTGGCCAGGCTGGTTTTCAACTCCTGACCTTAGGTGATCCACCTGCCTCAGCCTCCCAAAGAGCTGGGATAAAAGGCGTGAGCCACCGCGCCTGGCCTGATGCCTGTGTGTCATTCTCTTCTTTTCTTTTATAGTCATGTTAACAAAAGGAGATGCACAGAATAGCAACTTTCAGTGAGACTCTACCGAATTGTTGTAGGGCTTGGTAAAAAGTCCCATGTGGGAGAACCTTGAGTGTCCAGTGAGATGAAACACAGATTACTGAACCAGTAATCTGTGTTTTTTATTGGGCAATACTAGTACAGACTTAACCTAGACACAAGACTGTTATAATTCTATAAATTTACAGTATGATTGATATAATAGCAGGTAGAAACCACGTTCCTTGGCGCTAGTATCGAGTACAGTTGAATAACTTTAAAGTGAAAGTTAACATTTCCAATCTAGATTTTGTTATCATGGGGAAAATAATGATTGTGATTGAACAAATCAATGCTCGCATGCAAAATTTTAGGTGGACTTTTCTGAGATCTTGTAGAAAAAAAATAAATTGGGTTTTTATTGTCTAACCACAGATAGAGTAGAGTTTTGTTTTCTGGATCTGTCTAGTAGATTACTAAGCTTCCTTGTCCAGTGTGAATAAATAAGTTTGTGGGGGCATGGGTGATGCAGACAGTTTTAGCAGGACTTGTGTATTTTACTGGGTATGAGAGTAGACTTAGCATAAAGTGCTTGCAATTTCTCTCCACAATTGCTGTGCTGACTGATTCATATTCTGGGAATTAATTTACTACTGAATTCCTGGTTGGTGTTAAGAGAATGGCTTAACTTCTAATGATAAAGCTGAGAAAATAAGGACTTTCTTAACTGAAATGTGTCCTCCTCAGTCTTGTTCTTGTACTGTGCTCTGTCTCTCCATCCATCCTAAGCTCTCTCTAGTCACAACACTTACTCATTCTTCCATAAATAGACTTGTGCCCAAAAGGGGACAGACAAAAGAAGCATGGCAACATGTCTTACAGATTAGCTTTCTCTTTTCTTCCTCTGTCTTCTTTTTTCTGCAATTCTCAACTACTTCCCTGGCTTCAGGAATAATCTCTTATGATGATCATTCTCAAATCAGTTTCTCCAGCCTCTACCTTTCTTTTACATTTCAGTTCTCAATTCTCATTTTGTAGGTATCTCAAACACAACATATCTAAAATCAATTTTATTCCCTGCTATTCCCCTGCTCCTCCACCTTTCAATCCCTCTCCCACCCTGCTCCCACTCCTGAAATTCCATTTTCATGTAAAGGCTTCACCACCCGCCTCCTCACTCTACTCAACCTTTTGTAAAACCTCTCTCATCTCCATTTCCAGTTAGTTTCCAAGTCCAGTCAATTTTACATGATATCCTACATGGACTCGTTCACTGAGCTTAATTATTATTAGCAAACATTAACGCATATTGTGTTATTTCTACAGAAATCAGCAAAAGGTCCTGGGGTATCCTCTGTGTGGAAAATAACCATGATGCATCTTCAGTGTTGTAGTCTGACTCTATCACCCAGGCTGGAGTGCAGTGTGGCTGGAGGTGAAGTTCAGAGATACGGTGTCTTTCCTGAGTTGTGCAGCTCACGCATGGAGGGATCAGGATGGGAACTGAAGCCTGCATGGCTCAAAGTCTTTGCTTTGAAGTGCTGCAAATATGGCTTCCTGAGGAGGACTGCCCTGGACTGCAAATTTGTATTACACAGACAATACCTTTTCCCAGTGCCTTCTTCTGGACTTATGTCTATGTATTTAGTAAATAACTTATGAGTTTGTTTTTAAAAAACCTATTGAGGGCTGGGCATGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGATCACTTGAGGTCAGTAGTTCGAGACCCACCTGGACAACATAGTGAAACCCTGTCTCTACTAAGAATATAAAAATTAGCTGGGTATGGTGGCACACGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAAGCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGTGACTCTGTCTCAAAAAAACAAAACAAAACAAAACAAAAAAGCAAAAAAC</dnaseq>|
 
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[[Category:Intergenic]]
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[[Category:Intergenic]][[Category:lnc-ARMC1-1]]

Revision as of 12:04, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-ARMC1-1:2

Source

LNCipedia2.1

Same with

,

Classification

intergenic

Length

2520 nt

Genomic location

chr8-:66439243..66474901

Exon number

5

Exons

66439243..66439820,66442811..66442844,66443650..66445359,66446963..66447099,66474841..66474901

Genome context

Sequence
000001 GTGTATTGTG CATTGTGAAC ACCCTTCTCT TCCCACAGAA CCATCTAAAT TACAACCAAA GGTCTGATCA AAGGATGGCA 000080
000081 CCCAGTACAT GTGCTGAATG ACTGAATAGG GGCAGAGTCC CTTCCTGGTC CTGAAACGTG GAAATTGATT ATAGCACCAT 000160
000161 GCAGGAGTTT CCCCACCCAG TGAGCTGGGG CAGAAGAGGG TCTCACTTTG TCACCCAGGC TGGAATGCAG TGGCACAATG 000240
000241 TCGGTTCACT TCAACCTCAA CCTCCCAGGC TCAAGTGATC CTCCCACCTC AGTCTCCCAA GTAGCTGAAA TTACAGGAGC 000320
000321 CTACCACCAC GTCTGGCTAA TTTTTGTATT TTTAGTAGAG ATGGGGTTTC ACTATGTTGG CCAGGCTGGT TTTCAACTCC 000400
000401 TGACCTTAGG TGATCCACCT GCCTCAGCCT CCCAAAGAGC TGGGATAAAA GGCGTGAGCC ACCGCGCCTG GCCTGATGCC 000480
000481 TGTGTGTCAT TCTCTTCTTT TCTTTTATAG TCATGTTAAC AAAAGGAGAT GCACAGAATA GCAACTTTCA GTGAGACTCT 000560
000561 ACCGAATTGT TGTAGGGCTT GGTAAAAAGT CCCATGTGGG AGAACCTTGA GTGTCCAGTG AGATGAAACA CAGATTACTG 000640
000641 AACCAGTAAT CTGTGTTTTT TATTGGGCAA TACTAGTACA GACTTAACCT AGACACAAGA CTGTTATAAT TCTATAAATT 000720
000721 TACAGTATGA TTGATATAAT AGCAGGTAGA AACCACGTTC CTTGGCGCTA GTATCGAGTA CAGTTGAATA ACTTTAAAGT 000800
000801 GAAAGTTAAC ATTTCCAATC TAGATTTTGT TATCATGGGG AAAATAATGA TTGTGATTGA ACAAATCAAT GCTCGCATGC 000880
000881 AAAATTTTAG GTGGACTTTT CTGAGATCTT GTAGAAAAAA AATAAATTGG GTTTTTATTG TCTAACCACA GATAGAGTAG 000960
000961 AGTTTTGTTT TCTGGATCTG TCTAGTAGAT TACTAAGCTT CCTTGTCCAG TGTGAATAAA TAAGTTTGTG GGGGCATGGG 001040
001041 TGATGCAGAC AGTTTTAGCA GGACTTGTGT ATTTTACTGG GTATGAGAGT AGACTTAGCA TAAAGTGCTT GCAATTTCTC 001120
001121 TCCACAATTG CTGTGCTGAC TGATTCATAT TCTGGGAATT AATTTACTAC TGAATTCCTG GTTGGTGTTA AGAGAATGGC 001200
001201 TTAACTTCTA ATGATAAAGC TGAGAAAATA AGGACTTTCT TAACTGAAAT GTGTCCTCCT CAGTCTTGTT CTTGTACTGT 001280
001281 GCTCTGTCTC TCCATCCATC CTAAGCTCTC TCTAGTCACA ACACTTACTC ATTCTTCCAT AAATAGACTT GTGCCCAAAA 001360
001361 GGGGACAGAC AAAAGAAGCA TGGCAACATG TCTTACAGAT TAGCTTTCTC TTTTCTTCCT CTGTCTTCTT TTTTCTGCAA 001440
001441 TTCTCAACTA CTTCCCTGGC TTCAGGAATA ATCTCTTATG ATGATCATTC TCAAATCAGT TTCTCCAGCC TCTACCTTTC 001520
001521 TTTTACATTT CAGTTCTCAA TTCTCATTTT GTAGGTATCT CAAACACAAC ATATCTAAAA TCAATTTTAT TCCCTGCTAT 001600
001601 TCCCCTGCTC CTCCACCTTT CAATCCCTCT CCCACCCTGC TCCCACTCCT GAAATTCCAT TTTCATGTAA AGGCTTCACC 001680
001681 ACCCGCCTCC TCACTCTACT CAACCTTTTG TAAAACCTCT CTCATCTCCA TTTCCAGTTA GTTTCCAAGT CCAGTCAATT 001760
001761 TTACATGATA TCCTACATGG ACTCGTTCAC TGAGCTTAAT TATTATTAGC AAACATTAAC GCATATTGTG TTATTTCTAC 001840
001841 AGAAATCAGC AAAAGGTCCT GGGGTATCCT CTGTGTGGAA AATAACCATG ATGCATCTTC AGTGTTGTAG TCTGACTCTA 001920
001921 TCACCCAGGC TGGAGTGCAG TGTGGCTGGA GGTGAAGTTC AGAGATACGG TGTCTTTCCT GAGTTGTGCA GCTCACGCAT 002000
002001 GGAGGGATCA GGATGGGAAC TGAAGCCTGC ATGGCTCAAA GTCTTTGCTT TGAAGTGCTG CAAATATGGC TTCCTGAGGA 002080
002081 GGACTGCCCT GGACTGCAAA TTTGTATTAC ACAGACAATA CCTTTTCCCA GTGCCTTCTT CTGGACTTAT GTCTATGTAT 002160
002161 TTAGTAAATA ACTTATGAGT TTGTTTTTAA AAAACCTATT GAGGGCTGGG CATGGTGGCT CATGCCTGTA ATCCCAGCAC 002240
002241 TTTGGGAGGC CGAGGCGGGT GATCACTTGA GGTCAGTAGT TCGAGACCCA CCTGGACAAC ATAGTGAAAC CCTGTCTCTA 002320
002321 CTAAGAATAT AAAAATTAGC TGGGTATGGT GGCACACGCC TGTAATCCCA GCTACTCAGG AGGCTGAGGC AGGAGAATCA 002400
002401 CTTGAAGCCA GGAGGCGGAG GTTGCAGTGA GCCGAGATCG TGCCACTGCA CTCCAGCCTG GGCGACAGAG TGACTCTGTC 002480
002481 TCAAAAAAAC AAAACAAAAC AAAACAAAAA AGCAAAAAAC
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