Difference between revisions of "NONHSAT092250"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>acattcctactgtgtctcagcatctgttctcctgggaatagaactgGTCCACCTGAACATATGATCTGTGCTGCTGTTGGTGCAGGAGGACAGGAGGGAAATAAGCTGGAAGCCATGGATGTGGAGAGTCTGGCTTCAAGATGGAGCTTGTTTACCTGCAGGGCCCCATGCAGAACCTCATGAGACGTGACTTCAGAGGcctcctctctgaaggtgagggaggcgtcagctgttcagagagagaggctgccttgcctggggacacacagctagccagtggccggagcagcagtggatgcagttgtcctgatgcatagttcaagaagctttttTTTTTTTTTTTTTTTTCACGTGTGAAAACATCTATTGGGAAAATGGAAAAATCATTTGACCTCATATTCCTCATAGCTGACATGTCTCCTTGTTCCCACCCCACTGACCACTGAATTGCTGCTTGAATTGCCAGGAACTTCCTGGTGTGGCAGAAGGAAGACTAAGAACCAGGAAGTGGCTGACAAGAAAGGGAGCTGCATTCTGCAACTGGAGTTAGTATTTGCTCTGACCTAACACTTTGGGTGATT</dnaseq>| | sequence = <dnaseq>acattcctactgtgtctcagcatctgttctcctgggaatagaactgGTCCACCTGAACATATGATCTGTGCTGCTGTTGGTGCAGGAGGACAGGAGGGAAATAAGCTGGAAGCCATGGATGTGGAGAGTCTGGCTTCAAGATGGAGCTTGTTTACCTGCAGGGCCCCATGCAGAACCTCATGAGACGTGACTTCAGAGGcctcctctctgaaggtgagggaggcgtcagctgttcagagagagaggctgccttgcctggggacacacagctagccagtggccggagcagcagtggatgcagttgtcctgatgcatagttcaagaagctttttTTTTTTTTTTTTTTTTCACGTGTGAAAACATCTATTGGGAAAATGGAAAAATCATTTGACCTCATATTCCTCATAGCTGACATGTCTCCTTGTTCCCACCCCACTGACCACTGAATTGCTGCTTGAATTGCCAGGAACTTCCTGGTGTGGCAGAAGGAAGACTAAGAACCAGGAAGTGGCTGACAAGAAAGGGAGCTGCATTCTGCAACTGGAGTTAGTATTTGCTCTGACCTAACACTTTGGGTGATT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Antisense]] | + | [[Category:Antisense]][[Category:NONHSAG036156]] |
Revision as of 12:21, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT092250 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
581 nt |
Genomic location |
chr3+:134316666..134346946 |
Exon number |
3 |
Exons |
134316666..134316826,134334026..134334280,134346782..134346946 |
Genome context |
|
Sequence |
000001 acattcctac tgtgtctcag catctgttct cctgggaata gaactgGTCC ACCTGAACAT ATGATCTGTG CTGCTGTTGG 000080
000081 TGCAGGAGGA CAGGAGGGAA ATAAGCTGGA AGCCATGGAT GTGGAGAGTC TGGCTTCAAG ATGGAGCTTG TTTACCTGCA 000160 000161 GGGCCCCATG CAGAACCTCA TGAGACGTGA CTTCAGAGGc ctcctctctg aaggtgaggg aggcgtcagc tgttcagaga 000240 000241 gagaggctgc cttgcctggg gacacacagc tagccagtgg ccggagcagc agtggatgca gttgtcctga tgcatagttc 000320 000321 aagaagcttt ttTTTTTTTT TTTTTTTTCA CGTGTGAAAA CATCTATTGG GAAAATGGAA AAATCATTTG ACCTCATATT 000400 000401 CCTCATAGCT GACATGTCTC CTTGTTCCCA CCCCACTGAC CACTGAATTG CTGCTTGAAT TGCCAGGAAC TTCCTGGTGT 000480 000481 GGCAGAAGGA AGACTAAGAA CCAGGAAGTG GCTGACAAGA AAGGGAGCTG CATTCTGCAA CTGGAGTTAG TATTTGCTCT 000560 000561 GACCTAACAC TTTGGGTGAT T |
Predicted Small Protein
Name | NONHSAT092250_smProtein_140:316 |
Length | 59 |
Molecular weight | 6121.785 |
Aromaticity | 0.0344827586207 |
Instability index | 51.7379310345 |
Isoelectric point | 4.55499267578 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.0369697428522 |
Amino acid sequence | MELVYLQGPMQNLMRRDFRGLLSEGEGGVSCSEREAALPGDTQLASGRSSSGCSCPDA |
Secondary structure | LEEEEELLLHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLL |
PRMN | - |
PiMo | - |