Difference between revisions of "Lnc-IRX2-3:3"
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sequence = <dnaseq>TTTGGAGTCTCTTTTGGAAAAAATACGAAACAAATAAAGCCAGTTTCATTTTCAACTTCTATTTCAGCTGCTACACTGAAGGGAAAAACCTGAGGAAGCCCCTGACCTTCTTGAATAACCTGGATATTGCAGAATCATGCCTGGCACACGGCACTGGCAGAGACGCAGAAGGGAAAGTGTCCAGCGATGAGAGATACCGGCCAGGGGGCAAATCTTCAGCTTGCAGCACTCACTTTGCAGATCCAGTTGGAATTATTTGTGTTGACGCTCTCTGCTCTCTCCGCTCTCCCCTGGAAATGACGAGGAACTGAGTACAGTGGACAATGGCTTCCGTGTCCCTAGCTCCCCCCGAGCCATGAGCTGCTACATCAAAAGTCTGCAGTGGGCTGCCCTTCCCATAATATTTCAATTTAAGCACCGACTTGCTGCTGCGGAGTCATATCTCATTCATGCTGCAGCCTTTGCAGGAGTCAGGGATCATTATGGAGCAAGCACTGAGAAAAAACAGATTACAGCTTGGCACCGAGCAGCCAGGTTGCACCCCAGATGCTTCAGGGACATGGTGCCTGCTCTGGAGAATGGGGCAGCTTCCACACTGCCCAGGAGCCAGGGCTTCTGACCCAGGAGCGAAAGTCTGTCTCTTCCATTTCTGGGAGCTGGCAGTATTTGCACGACTTTCTGGGCCTCAGGCATCCCATTGCCCACCAGGAATTACCTTCCTCCAGGATCATGGTGAAGATGACATGAGATGCTAATGCTTGGCCTGCGGTTGCTATTTTTAGTTCTCCACTTTCCTGGAAAGCATGCAGTTGAAGTTCATGACGGTATTCTCTCAACGTGTGACTCAAAGACAGAGGCCGTTTCCCATCCACCGGTTCTCACACTGCCCCATTCTGCAGCTTCACCATCCACGCGCTAAGAAGGCAGGCCCCAAAGTCTCAGCACCCAGCCGCTGGGGTCCTCGCTCTTATGGACAGAAAACTCAAGAATGAATATGTTTCCCCATCTTGTGCCCTTTTGCCTGGAAACTATACAGAGCAGGGGTCCCTGCTGGCATTCCTTCTCTGTACTAGTACGGCTTCGGAAAGTACTGGTTCTCTGAGGAGCGCTCAGTTGCATCTGGAAGGTGCAGTGTGCACAGCGATGCCCCTTGACACCAAGGTGTGAGCATTTGAGCTGTGCTGGAAGGTTCTCCATGGAATAGTGCCCACCCTGGAGGGTCCTGTGCCGCGCACTTGAGGAGGCTGTGGTGGTGAGGAGAGACTCTGGAGCAACCCACACTCCCGATAAGTCAGATAAGAGTGCCTCCTCTAGGTAAGTTTATGTTGCAAATTTAAAGAGAGGAACCAAGAAACAGCAAGGACACTGAGCCAGGACTGAGAGTTTGGGTCTTAGGTGGCTTTGGGTCATTACGCCCTCTCAAGTGGATTGCTCTAAGCCCTGTTTATTTGTTAATGTGAATAGTTG</dnaseq>| | sequence = <dnaseq>TTTGGAGTCTCTTTTGGAAAAAATACGAAACAAATAAAGCCAGTTTCATTTTCAACTTCTATTTCAGCTGCTACACTGAAGGGAAAAACCTGAGGAAGCCCCTGACCTTCTTGAATAACCTGGATATTGCAGAATCATGCCTGGCACACGGCACTGGCAGAGACGCAGAAGGGAAAGTGTCCAGCGATGAGAGATACCGGCCAGGGGGCAAATCTTCAGCTTGCAGCACTCACTTTGCAGATCCAGTTGGAATTATTTGTGTTGACGCTCTCTGCTCTCTCCGCTCTCCCCTGGAAATGACGAGGAACTGAGTACAGTGGACAATGGCTTCCGTGTCCCTAGCTCCCCCCGAGCCATGAGCTGCTACATCAAAAGTCTGCAGTGGGCTGCCCTTCCCATAATATTTCAATTTAAGCACCGACTTGCTGCTGCGGAGTCATATCTCATTCATGCTGCAGCCTTTGCAGGAGTCAGGGATCATTATGGAGCAAGCACTGAGAAAAAACAGATTACAGCTTGGCACCGAGCAGCCAGGTTGCACCCCAGATGCTTCAGGGACATGGTGCCTGCTCTGGAGAATGGGGCAGCTTCCACACTGCCCAGGAGCCAGGGCTTCTGACCCAGGAGCGAAAGTCTGTCTCTTCCATTTCTGGGAGCTGGCAGTATTTGCACGACTTTCTGGGCCTCAGGCATCCCATTGCCCACCAGGAATTACCTTCCTCCAGGATCATGGTGAAGATGACATGAGATGCTAATGCTTGGCCTGCGGTTGCTATTTTTAGTTCTCCACTTTCCTGGAAAGCATGCAGTTGAAGTTCATGACGGTATTCTCTCAACGTGTGACTCAAAGACAGAGGCCGTTTCCCATCCACCGGTTCTCACACTGCCCCATTCTGCAGCTTCACCATCCACGCGCTAAGAAGGCAGGCCCCAAAGTCTCAGCACCCAGCCGCTGGGGTCCTCGCTCTTATGGACAGAAAACTCAAGAATGAATATGTTTCCCCATCTTGTGCCCTTTTGCCTGGAAACTATACAGAGCAGGGGTCCCTGCTGGCATTCCTTCTCTGTACTAGTACGGCTTCGGAAAGTACTGGTTCTCTGAGGAGCGCTCAGTTGCATCTGGAAGGTGCAGTGTGCACAGCGATGCCCCTTGACACCAAGGTGTGAGCATTTGAGCTGTGCTGGAAGGTTCTCCATGGAATAGTGCCCACCCTGGAGGGTCCTGTGCCGCGCACTTGAGGAGGCTGTGGTGGTGAGGAGAGACTCTGGAGCAACCCACACTCCCGATAAGTCAGATAAGAGTGCCTCCTCTAGGTAAGTTTATGTTGCAAATTTAAAGAGAGGAACCAAGAAACAGCAAGGACACTGAGCCAGGACTGAGAGTTTGGGTCTTAGGTGGCTTTGGGTCATTACGCCCTCTCAAGTGGATTGCTCTAAGCCCTGTTTATTTGTTAATGTGAATAGTTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-IRX2-3]] | + | [[Category:Intergenic]][[Category:lnc-IRX2-3]][[Category:NONHSAG039707]] |
Revision as of 12:26, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-IRX2-3:3 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT100125 |
| Classification |
intergenic |
| Length |
1467 nt |
| Genomic location |
chr5-:3418732..3532059 |
| Exon number |
4 |
| Exons |
3418732..3419430,3421185..3421418,3422396..3422736,3531867..3532059 |
| Genome context |
|
| Sequence |
000001 TTTGGAGTCT CTTTTGGAAA AAATACGAAA CAAATAAAGC CAGTTTCATT TTCAACTTCT ATTTCAGCTG CTACACTGAA 000080
000081 GGGAAAAACC TGAGGAAGCC CCTGACCTTC TTGAATAACC TGGATATTGC AGAATCATGC CTGGCACACG GCACTGGCAG 000160 000161 AGACGCAGAA GGGAAAGTGT CCAGCGATGA GAGATACCGG CCAGGGGGCA AATCTTCAGC TTGCAGCACT CACTTTGCAG 000240 000241 ATCCAGTTGG AATTATTTGT GTTGACGCTC TCTGCTCTCT CCGCTCTCCC CTGGAAATGA CGAGGAACTG AGTACAGTGG 000320 000321 ACAATGGCTT CCGTGTCCCT AGCTCCCCCC GAGCCATGAG CTGCTACATC AAAAGTCTGC AGTGGGCTGC CCTTCCCATA 000400 000401 ATATTTCAAT TTAAGCACCG ACTTGCTGCT GCGGAGTCAT ATCTCATTCA TGCTGCAGCC TTTGCAGGAG TCAGGGATCA 000480 000481 TTATGGAGCA AGCACTGAGA AAAAACAGAT TACAGCTTGG CACCGAGCAG CCAGGTTGCA CCCCAGATGC TTCAGGGACA 000560 000561 TGGTGCCTGC TCTGGAGAAT GGGGCAGCTT CCACACTGCC CAGGAGCCAG GGCTTCTGAC CCAGGAGCGA AAGTCTGTCT 000640 000641 CTTCCATTTC TGGGAGCTGG CAGTATTTGC ACGACTTTCT GGGCCTCAGG CATCCCATTG CCCACCAGGA ATTACCTTCC 000720 000721 TCCAGGATCA TGGTGAAGAT GACATGAGAT GCTAATGCTT GGCCTGCGGT TGCTATTTTT AGTTCTCCAC TTTCCTGGAA 000800 000801 AGCATGCAGT TGAAGTTCAT GACGGTATTC TCTCAACGTG TGACTCAAAG ACAGAGGCCG TTTCCCATCC ACCGGTTCTC 000880 000881 ACACTGCCCC ATTCTGCAGC TTCACCATCC ACGCGCTAAG AAGGCAGGCC CCAAAGTCTC AGCACCCAGC CGCTGGGGTC 000960 000961 CTCGCTCTTA TGGACAGAAA ACTCAAGAAT GAATATGTTT CCCCATCTTG TGCCCTTTTG CCTGGAAACT ATACAGAGCA 001040 001041 GGGGTCCCTG CTGGCATTCC TTCTCTGTAC TAGTACGGCT TCGGAAAGTA CTGGTTCTCT GAGGAGCGCT CAGTTGCATC 001120 001121 TGGAAGGTGC AGTGTGCACA GCGATGCCCC TTGACACCAA GGTGTGAGCA TTTGAGCTGT GCTGGAAGGT TCTCCATGGA 001200 001201 ATAGTGCCCA CCCTGGAGGG TCCTGTGCCG CGCACTTGAG GAGGCTGTGG TGGTGAGGAG AGACTCTGGA GCAACCCACA 001280 001281 CTCCCGATAA GTCAGATAAG AGTGCCTCCT CTAGGTAAGT TTATGTTGCA AATTTAAAGA GAGGAACCAA GAAACAGCAA 001360 001361 GGACACTGAG CCAGGACTGA GAGTTTGGGT CTTAGGTGGC TTTGGGTCAT TACGCCCTCT CAAGTGGATT GCTCTAAGCC 001440 001441 CTGTTTATTT GTTAATGTGA ATAGTTG |
