Difference between revisions of "NONHSAT134845"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CCGGGACTATGTCGCGGGCGCGGAGCCACCTGCGCGCCGCTCTATTCCTGGCAGCGGCGTCTGCGCGCGGCATAACGACCCAGGTCGCGGCGCGGCGGGGCTTGAGCGCGTGGCCGGTGCCGCAGGAGCCGAGCATGGAGTACCAGCTCTCCCCACCTGGTGCAGGTTCGGGAGCGGATCCGCATCAATGGGCAGCCCATCAGTCCTGAGCTCTTCACCAAGTACTTCTGGCGCCTCTACCACCGGCTGGAGGAGACCAAGGATGGCAGCTGTGTCTCCATGCCCCCCTACTTCCGCTTCCTGACACTCATGGCCTTCCACGTCTTCCTCCAAGAGAAGGTGGACCTGGCAGTGGTGGAGGTGGGCATTGGCGGGGCTTATGACTGCACCAACATCATCAGGAAGCCTGTGGTGTGCGGAGTCTCCTCTCTTGGCATCGACCACACCAGCCTCCTGGGGGATACGGTGGAGAAGATCGCATGGCAGAAAGGGGGCATCTTTAAG</dnaseq>| | sequence = <dnaseq>CCGGGACTATGTCGCGGGCGCGGAGCCACCTGCGCGCCGCTCTATTCCTGGCAGCGGCGTCTGCGCGCGGCATAACGACCCAGGTCGCGGCGCGGCGGGGCTTGAGCGCGTGGCCGGTGCCGCAGGAGCCGAGCATGGAGTACCAGCTCTCCCCACCTGGTGCAGGTTCGGGAGCGGATCCGCATCAATGGGCAGCCCATCAGTCCTGAGCTCTTCACCAAGTACTTCTGGCGCCTCTACCACCGGCTGGAGGAGACCAAGGATGGCAGCTGTGTCTCCATGCCCCCCTACTTCCGCTTCCTGACACTCATGGCCTTCCACGTCTTCCTCCAAGAGAAGGTGGACCTGGCAGTGGTGGAGGTGGGCATTGGCGGGGCTTATGACTGCACCAACATCATCAGGAAGCCTGTGGTGTGCGGAGTCTCCTCTCTTGGCATCGACCACACCAGCCTCCTGGGGGATACGGTGGAGAAGATCGCATGGCAGAAAGGGGGCATCTTTAAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG053496]] |
Revision as of 12:28, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT134845 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
504 nt |
| Genomic location |
chr9+:130565196..130569967 |
| Exon number |
5 |
| Exons |
130565196..130565341,130569252..130569366,130569488..130569565,130569700..130569761,130569865..130569967 |
| Genome context |
|
| Sequence |
000001 CCGGGACTAT GTCGCGGGCG CGGAGCCACC TGCGCGCCGC TCTATTCCTG GCAGCGGCGT CTGCGCGCGG CATAACGACC 000080
000081 CAGGTCGCGG CGCGGCGGGG CTTGAGCGCG TGGCCGGTGC CGCAGGAGCC GAGCATGGAG TACCAGCTCT CCCCACCTGG 000160 000161 TGCAGGTTCG GGAGCGGATC CGCATCAATG GGCAGCCCAT CAGTCCTGAG CTCTTCACCA AGTACTTCTG GCGCCTCTAC 000240 000241 CACCGGCTGG AGGAGACCAA GGATGGCAGC TGTGTCTCCA TGCCCCCCTA CTTCCGCTTC CTGACACTCA TGGCCTTCCA 000320 000321 CGTCTTCCTC CAAGAGAAGG TGGACCTGGC AGTGGTGGAG GTGGGCATTG GCGGGGCTTA TGACTGCACC AACATCATCA 000400 000401 GGAAGCCTGT GGTGTGCGGA GTCTCCTCTC TTGGCATCGA CCACACCAGC CTCCTGGGGG ATACGGTGGA GAAGATCGCA 000480 000481 TGGCAGAAAG GGGGCATCTT TAAG |
Predicted Small Protein
| Name | NONHSAT134845_smProtein_8:208 |
| Length | 67 |
| Molecular weight | 6964.7397 |
| Aromaticity | 0.0606060606061 |
| Instability index | 57.8545454545 |
| Isoelectric point | 11.3242797852 |
| Runs | 9 |
| Runs residual | 0.0142442387951 |
| Runs probability | 0.031482462855 |
| Amino acid sequence | MSRARSHLRAALFLAAASARGITTQVAARRGLSAWPVPQEPSMEYQLSPPGAGSGADPHQ WAAHQS |
| Secondary structure | LLHHHHHHHHHHHHHHHHHLLLHHHHHHHHLLLLLLLLLLLLLEEEELLLLLLLLLLHHH HHHLLL |
| PRMN | - |
| PiMo | - |
