Difference between revisions of "Lnc-PTPN2-3:1"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AAGGATTTAGTAATTTGTCCTCAGACCACAAAGAGATGGTTTTACATCCCTAACTAGCTGCATAGAAAGCTGGGAGCTGAACCAGCATGCCATACTGCCACCTACCTACAGCAGCGCTGACAGTTCTTCAGCTCAGCCCGCAAACCAGCCAGCATCTGCCCTGTGCCCGGCAATGAGCCCGCTCCAGCTGGGAATGCCCAGGTCCTGGTCTAACTGAGAAGCTTGTAGCAGGGGAACTTTGAACCTGGCTGCCTGGAAACTTGGAAGCAACCCAGATGTCTTCAGTAGGTGAATGGATAAATAAACTGTGGTGCATCCCAATATTGGAATATGATTCAGCACTAAAAAGAAATGAGCTATCAAGCCATGAAAAGATATGGAGGAAATTTAAATGCACATTATTTAAGTTAAGGAAGACAATCTGAAAAGGCTACACCCTGTATGAGTCCAACTCTATGACACCCTGGAAAAGGCAAAACTACGGAGACAATAAAAAGATCAGGGGTTGCCAAGGGTTGGATGTTGGGGAGGGATGAATAGATAGAACATAGAGGATTCTTCAGACAGTGAAACTACTCTGTCTGATACTATAATGGTGGATACACAGTATTATACAATCATCCAAACCCGTAGAATGTACAACACCAAGACTGAACCTCCAACTCCTGGGCTCAAGTGATCCTCTGCCTCAGCCTCCCGAGTAGCTGAAACTATTGGTGCACACGACCACATCTGGCCAATTTTTAAAAAATTACTATAGAGGCAGGATCTCACTATGTTGCCCAGGATAGTCTCAAACTCCTGGCCTCAAGCCATCCTCCTGCCTCAACCTTCAAAAGTGCTGGGATTGCCACCACCCAGGCTCGCCCCTGGTCCTTAGTTGGCAATAAAGTATCACTCTTGGCTCATCAGTTGCAACATCAGCATATCACAGTAATGCAAGAGGTTTACAGTGCAGGACATAGGGACTTGGTGAGGGGACATGAGAATCCTCTGCACATTCTGTTCAATTTGTCTCAAAATAAAATATATTCATTAAAATAAAACTACTAATTTCTTATCAACTCATCTCATAAAATGGACTGATGGGAGACTAAGTCAGTATCCTATTAGCAGACACAACCAGAAATTAAGAGTGGTCCCATGTCAAAGAGGTTTGCCCAAGCATTGCAGATACAGGACTGAACAGACTGCCATCCTGGCCGTCTCGAATGTCAATGTTAGTAATAGTTATTTTATTATGATGTTGAACTCATCATTTATAATGCCATATTTGTTGCTTCAGTTATCACATTTAACCTGTCACAAGCTTAAAAATACATATTCTTTAAAAAGATAGTTTGTGGATCAAGAACTCCCAGTTAAGCCTACTAGATGAGCTGTGTGTGTTTGTTGCTCTCCCTTCAAAAAAACTGCTAAAATAATAATTGAAAAGATACAAACCCACTTGTCGAAGGGAGAAGAGACCAACGGCAGACATAAGATTCCAGACGATTTTTGGAGAGTGGAAAGAGCACGCAGTTGACTTAGAAAAGCATCCCGGGCCGGGCATGGTGGCTCACGCCAGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGAGGACTGCTTGAGGTCAGGAGTTCGAAACCAGCCTGGCCAACATGGCAAAACCCCATCTCTACTAAAAATACAAAAAAAAAAAAAAAATTAGCTGGGCATGGTGGCAGGTGGCAGGTGCCTATAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCTGGGAGGTGGACGTTGCAGTGAGCCGAGGTCGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGCGACTCCATCTCT</dnaseq>| | sequence = <dnaseq>AAGGATTTAGTAATTTGTCCTCAGACCACAAAGAGATGGTTTTACATCCCTAACTAGCTGCATAGAAAGCTGGGAGCTGAACCAGCATGCCATACTGCCACCTACCTACAGCAGCGCTGACAGTTCTTCAGCTCAGCCCGCAAACCAGCCAGCATCTGCCCTGTGCCCGGCAATGAGCCCGCTCCAGCTGGGAATGCCCAGGTCCTGGTCTAACTGAGAAGCTTGTAGCAGGGGAACTTTGAACCTGGCTGCCTGGAAACTTGGAAGCAACCCAGATGTCTTCAGTAGGTGAATGGATAAATAAACTGTGGTGCATCCCAATATTGGAATATGATTCAGCACTAAAAAGAAATGAGCTATCAAGCCATGAAAAGATATGGAGGAAATTTAAATGCACATTATTTAAGTTAAGGAAGACAATCTGAAAAGGCTACACCCTGTATGAGTCCAACTCTATGACACCCTGGAAAAGGCAAAACTACGGAGACAATAAAAAGATCAGGGGTTGCCAAGGGTTGGATGTTGGGGAGGGATGAATAGATAGAACATAGAGGATTCTTCAGACAGTGAAACTACTCTGTCTGATACTATAATGGTGGATACACAGTATTATACAATCATCCAAACCCGTAGAATGTACAACACCAAGACTGAACCTCCAACTCCTGGGCTCAAGTGATCCTCTGCCTCAGCCTCCCGAGTAGCTGAAACTATTGGTGCACACGACCACATCTGGCCAATTTTTAAAAAATTACTATAGAGGCAGGATCTCACTATGTTGCCCAGGATAGTCTCAAACTCCTGGCCTCAAGCCATCCTCCTGCCTCAACCTTCAAAAGTGCTGGGATTGCCACCACCCAGGCTCGCCCCTGGTCCTTAGTTGGCAATAAAGTATCACTCTTGGCTCATCAGTTGCAACATCAGCATATCACAGTAATGCAAGAGGTTTACAGTGCAGGACATAGGGACTTGGTGAGGGGACATGAGAATCCTCTGCACATTCTGTTCAATTTGTCTCAAAATAAAATATATTCATTAAAATAAAACTACTAATTTCTTATCAACTCATCTCATAAAATGGACTGATGGGAGACTAAGTCAGTATCCTATTAGCAGACACAACCAGAAATTAAGAGTGGTCCCATGTCAAAGAGGTTTGCCCAAGCATTGCAGATACAGGACTGAACAGACTGCCATCCTGGCCGTCTCGAATGTCAATGTTAGTAATAGTTATTTTATTATGATGTTGAACTCATCATTTATAATGCCATATTTGTTGCTTCAGTTATCACATTTAACCTGTCACAAGCTTAAAAATACATATTCTTTAAAAAGATAGTTTGTGGATCAAGAACTCCCAGTTAAGCCTACTAGATGAGCTGTGTGTGTTTGTTGCTCTCCCTTCAAAAAAACTGCTAAAATAATAATTGAAAAGATACAAACCCACTTGTCGAAGGGAGAAGAGACCAACGGCAGACATAAGATTCCAGACGATTTTTGGAGAGTGGAAAGAGCACGCAGTTGACTTAGAAAAGCATCCCGGGCCGGGCATGGTGGCTCACGCCAGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGAGGACTGCTTGAGGTCAGGAGTTCGAAACCAGCCTGGCCAACATGGCAAAACCCCATCTCTACTAAAAATACAAAAAAAAAAAAAAAATTAGCTGGGCATGGTGGCAGGTGGCAGGTGCCTATAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAGCCTGGGAGGTGGACGTTGCAGTGAGCCGAGGTCGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGCGACTCCATCTCT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:lnc-PTPN2-3]] |
Revision as of 12:29, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-PTPN2-3:1 |
| Source |
LNCipedia2.1 |
| Same with |
, |
| Classification |
intergenic |
| Length |
1843 nt |
| Genomic location |
chr18-:13203782..13216366 |
| Exon number |
2 |
| Exons |
13203782..13205368,13216111..13216366 |
| Genome context |
|
| Sequence |
000001 AAGGATTTAG TAATTTGTCC TCAGACCACA AAGAGATGGT TTTACATCCC TAACTAGCTG CATAGAAAGC TGGGAGCTGA 000080
000081 ACCAGCATGC CATACTGCCA CCTACCTACA GCAGCGCTGA CAGTTCTTCA GCTCAGCCCG CAAACCAGCC AGCATCTGCC 000160 000161 CTGTGCCCGG CAATGAGCCC GCTCCAGCTG GGAATGCCCA GGTCCTGGTC TAACTGAGAA GCTTGTAGCA GGGGAACTTT 000240 000241 GAACCTGGCT GCCTGGAAAC TTGGAAGCAA CCCAGATGTC TTCAGTAGGT GAATGGATAA ATAAACTGTG GTGCATCCCA 000320 000321 ATATTGGAAT ATGATTCAGC ACTAAAAAGA AATGAGCTAT CAAGCCATGA AAAGATATGG AGGAAATTTA AATGCACATT 000400 000401 ATTTAAGTTA AGGAAGACAA TCTGAAAAGG CTACACCCTG TATGAGTCCA ACTCTATGAC ACCCTGGAAA AGGCAAAACT 000480 000481 ACGGAGACAA TAAAAAGATC AGGGGTTGCC AAGGGTTGGA TGTTGGGGAG GGATGAATAG ATAGAACATA GAGGATTCTT 000560 000561 CAGACAGTGA AACTACTCTG TCTGATACTA TAATGGTGGA TACACAGTAT TATACAATCA TCCAAACCCG TAGAATGTAC 000640 000641 AACACCAAGA CTGAACCTCC AACTCCTGGG CTCAAGTGAT CCTCTGCCTC AGCCTCCCGA GTAGCTGAAA CTATTGGTGC 000720 000721 ACACGACCAC ATCTGGCCAA TTTTTAAAAA ATTACTATAG AGGCAGGATC TCACTATGTT GCCCAGGATA GTCTCAAACT 000800 000801 CCTGGCCTCA AGCCATCCTC CTGCCTCAAC CTTCAAAAGT GCTGGGATTG CCACCACCCA GGCTCGCCCC TGGTCCTTAG 000880 000881 TTGGCAATAA AGTATCACTC TTGGCTCATC AGTTGCAACA TCAGCATATC ACAGTAATGC AAGAGGTTTA CAGTGCAGGA 000960 000961 CATAGGGACT TGGTGAGGGG ACATGAGAAT CCTCTGCACA TTCTGTTCAA TTTGTCTCAA AATAAAATAT ATTCATTAAA 001040 001041 ATAAAACTAC TAATTTCTTA TCAACTCATC TCATAAAATG GACTGATGGG AGACTAAGTC AGTATCCTAT TAGCAGACAC 001120 001121 AACCAGAAAT TAAGAGTGGT CCCATGTCAA AGAGGTTTGC CCAAGCATTG CAGATACAGG ACTGAACAGA CTGCCATCCT 001200 001201 GGCCGTCTCG AATGTCAATG TTAGTAATAG TTATTTTATT ATGATGTTGA ACTCATCATT TATAATGCCA TATTTGTTGC 001280 001281 TTCAGTTATC ACATTTAACC TGTCACAAGC TTAAAAATAC ATATTCTTTA AAAAGATAGT TTGTGGATCA AGAACTCCCA 001360 001361 GTTAAGCCTA CTAGATGAGC TGTGTGTGTT TGTTGCTCTC CCTTCAAAAA AACTGCTAAA ATAATAATTG AAAAGATACA 001440 001441 AACCCACTTG TCGAAGGGAG AAGAGACCAA CGGCAGACAT AAGATTCCAG ACGATTTTTG GAGAGTGGAA AGAGCACGCA 001520 001521 GTTGACTTAG AAAAGCATCC CGGGCCGGGC ATGGTGGCTC ACGCCAGTAA TCCCAGCACT TTGGGAGGCC AAGGCAGGAG 001600 001601 GACTGCTTGA GGTCAGGAGT TCGAAACCAG CCTGGCCAAC ATGGCAAAAC CCCATCTCTA CTAAAAATAC AAAAAAAAAA 001680 001681 AAAAAATTAG CTGGGCATGG TGGCAGGTGG CAGGTGCCTA TAATCCCAGC TACTCGGGAG GCTGAGGCAG GAGAATTGCT 001760 001761 TGAGCCTGGG AGGTGGACGT TGCAGTGAGC CGAGGTCGTG CCACTGCACT CCAGCCTGGG TGACAGAGTG CGACTCCATC 001840 001841 TCT |