Difference between revisions of "NONHSAT070576"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TTTCAGTATATTGGAGAATCGCAAGGATATGATATCATGGAACCAGCAGCAAAGAAGTGCTATCTGGAAAGAGAGAACCTCAGAGTGACAGAGCCAAAAGACCAGTGCCTCATTTTGCTGACATGGAAAAGGAAACTTCGTGGGGGAAAGAGATCTGCTTGCAGTCGGCCAGAGAGACAGAACCAGGGCAGTGcgactccaagtgcatcagcataggcattgccaggagctcatgaggaatgcagactgtcaggtcccaccccagacctactcaacagaaactacttggtaagcagattcccaggtggttccaggcaccttacagtttgaaaagcactgctgcatgctatcctaccTTCCTGGTCTGTAACATCTGTTGCTGTTGAGTATAAAGACACTGTGAACATTGTAAAATC</dnaseq>| | sequence = <dnaseq>TTTCAGTATATTGGAGAATCGCAAGGATATGATATCATGGAACCAGCAGCAAAGAAGTGCTATCTGGAAAGAGAGAACCTCAGAGTGACAGAGCCAAAAGACCAGTGCCTCATTTTGCTGACATGGAAAAGGAAACTTCGTGGGGGAAAGAGATCTGCTTGCAGTCGGCCAGAGAGACAGAACCAGGGCAGTGcgactccaagtgcatcagcataggcattgccaggagctcatgaggaatgcagactgtcaggtcccaccccagacctactcaacagaaactacttggtaagcagattcccaggtggttccaggcaccttacagtttgaaaagcactgctgcatgctatcctaccTTCCTGGTCTGTAACATCTGTTGCTGTTGAGTATAAAGACACTGTGAACATTGTAAAATC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG027695]] |
Revision as of 12:37, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT070576 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
416 nt |
| Genomic location |
chr2+:47707936..47789450 |
| Exon number |
3 |
| Exons |
47707936..47708010,47739442..47739559,47789228..47789450 |
| Genome context |
|
| Sequence |
000001 TTTCAGTATA TTGGAGAATC GCAAGGATAT GATATCATGG AACCAGCAGC AAAGAAGTGC TATCTGGAAA GAGAGAACCT 000080
000081 CAGAGTGACA GAGCCAAAAG ACCAGTGCCT CATTTTGCTG ACATGGAAAA GGAAACTTCG TGGGGGAAAG AGATCTGCTT 000160 000161 GCAGTCGGCC AGAGAGACAG AACCAGGGCA GTGcgactcc aagtgcatca gcataggcat tgccaggagc tcatgaggaa 000240 000241 tgcagactgt caggtcccac cccagaccta ctcaacagaa actacttggt aagcagattc ccaggtggtt ccaggcacct 000320 000321 tacagtttga aaagcactgc tgcatgctat cctaccTTCC TGGTCTGTAA CATCTGTTGC TGTTGAGTAT AAAGACACTG 000400 000401 TGAACATTGT AAAATC |
Predicted Small Protein
| Name | NONHSAT070576_smProtein_239:385 |
| Length | 49 |
| Molecular weight | 5515.5077 |
| Aromaticity | 0.104166666667 |
| Instability index | 58.5020833333 |
| Isoelectric point | 9.49859619141 |
| Runs | 9 |
| Runs residual | 0.0219298245614 |
| Runs probability | 0.0274293901745 |
| Amino acid sequence | MQTVRSHPRPTQQKLLGKQIPRWFQAPYSLKSTAACYPTFLVCNICCC |
| Secondary structure | LLEELLLLLLHHHHHHHLLLLLLLLLLLLLLLLLLLLLLEEEELLEEL |
| PRMN | - |
| PiMo | - |
