Difference between revisions of "NONHSAT092995"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GGGGTTTCACCACGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGATGATCCACCCTCCTTGGCCTCCCAAAGTGCTGGGATTGCAGGCGTGAGCCACCGCCTGGCCACCATTTTACTCTTTTTAGGTACAGTAATCTAATATCCAAAGTCTTGGACTCAGCTAAAGAGGGTATTTACCTTAAAAAAAAAAAAAAAAAGACTCCATCTTTTGATTCATAATTGTGGTGGGGGCGGGGAATCAAGACAACCTTAGTCACTTTGGTATTACCATAATTCTTGTCTTTTCAGGGTTGTCCTGTTCAGCTGCATAAAACATCATGTATTCTAGGTATTTCCTACCTTCACTTACATTTTTACTTGCCGATGTGCTGCCTTCATAAATGGGTATATTCCGCCACACATCTAGTAAGCCCCCAATGCAGTACACAATGTGTATCACTGATAAAACTCGCACTTCTGCCATGTCAGTATTATATTCAGTTGAGTGGTCTTTAGCATAGTGGCAGTCCTAGTCATCCTAACCTTTTAGTTAAGGTAAAATTACATATGTTTATAGAACTCATATAGACAAGCTAGTTTTTAAAATCTTCTTCCTTTTAACCAGTTTAGGATGATCTAAGATAGCTAAGTTACCTACATGGTGACTGTTCGGTCTAATTCAGAAACAGAAGTACTAAAAGAATACTAAAAAGTTTTTACCCATTATCTCTATCCCTGTTTTCTTTTTGCAATTCTCAGCTGCAGGGAGCAAGAAAATACACAGCAGATAGGAAATGTTTGTTTGCATCCTGGCTTTCTCAACTGCACTTTACGTCCTTGAATATTCTAGATATTTACTCCTTCAAGAAGTCAGGAGTATATCCAGGCCTACCTATCATCCTTGCCATCCCCATTAACCCTCATTTTTCAGTATGTGTTTTACATTTATGGTTATTTTTCAGTCTATAGTATCTGTTCACTCATTGCTCTATCACATCTGAGTTTCTCCGTCTTTCTTTCCACTAGATTGTAAGCTCCTTAAGGGCAAGGTCGGCATATAAGCAAAGTTCTGTAAACACCGTGAAGGTACCATGAGTTCTATGGGTACTCAATAAATGCTTGTGATAATGAAAAAAAAAAAAAAAAAAAAAAAA</dnaseq>| | sequence = <dnaseq>GGGGTTTCACCACGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGATGATCCACCCTCCTTGGCCTCCCAAAGTGCTGGGATTGCAGGCGTGAGCCACCGCCTGGCCACCATTTTACTCTTTTTAGGTACAGTAATCTAATATCCAAAGTCTTGGACTCAGCTAAAGAGGGTATTTACCTTAAAAAAAAAAAAAAAAAGACTCCATCTTTTGATTCATAATTGTGGTGGGGGCGGGGAATCAAGACAACCTTAGTCACTTTGGTATTACCATAATTCTTGTCTTTTCAGGGTTGTCCTGTTCAGCTGCATAAAACATCATGTATTCTAGGTATTTCCTACCTTCACTTACATTTTTACTTGCCGATGTGCTGCCTTCATAAATGGGTATATTCCGCCACACATCTAGTAAGCCCCCAATGCAGTACACAATGTGTATCACTGATAAAACTCGCACTTCTGCCATGTCAGTATTATATTCAGTTGAGTGGTCTTTAGCATAGTGGCAGTCCTAGTCATCCTAACCTTTTAGTTAAGGTAAAATTACATATGTTTATAGAACTCATATAGACAAGCTAGTTTTTAAAATCTTCTTCCTTTTAACCAGTTTAGGATGATCTAAGATAGCTAAGTTACCTACATGGTGACTGTTCGGTCTAATTCAGAAACAGAAGTACTAAAAGAATACTAAAAAGTTTTTACCCATTATCTCTATCCCTGTTTTCTTTTTGCAATTCTCAGCTGCAGGGAGCAAGAAAATACACAGCAGATAGGAAATGTTTGTTTGCATCCTGGCTTTCTCAACTGCACTTTACGTCCTTGAATATTCTAGATATTTACTCCTTCAAGAAGTCAGGAGTATATCCAGGCCTACCTATCATCCTTGCCATCCCCATTAACCCTCATTTTTCAGTATGTGTTTTACATTTATGGTTATTTTTCAGTCTATAGTATCTGTTCACTCATTGCTCTATCACATCTGAGTTTCTCCGTCTTTCTTTCCACTAGATTGTAAGCTCCTTAAGGGCAAGGTCGGCATATAAGCAAAGTTCTGTAAACACCGTGAAGGTACCATGAGTTCTATGGGTACTCAATAAATGCTTGTGATAATGAAAAAAAAAAAAAAAAAAAAAAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG036533]] |
Revision as of 12:39, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT092995 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
1136 nt |
| Genomic location |
chr3-:160212795..160213904 |
| Exon number |
1 |
| Exons |
160212795..160213904 |
| Genome context |
|
| Sequence |
000001 GGGGTTTCAC CACGTTGGCC AGGCTGGTCT CGAACTCCTG ACCTCAGATG ATCCACCCTC CTTGGCCTCC CAAAGTGCTG 000080
000081 GGATTGCAGG CGTGAGCCAC CGCCTGGCCA CCATTTTACT CTTTTTAGGT ACAGTAATCT AATATCCAAA GTCTTGGACT 000160 000161 CAGCTAAAGA GGGTATTTAC CTTAAAAAAA AAAAAAAAAA GACTCCATCT TTTGATTCAT AATTGTGGTG GGGGCGGGGA 000240 000241 ATCAAGACAA CCTTAGTCAC TTTGGTATTA CCATAATTCT TGTCTTTTCA GGGTTGTCCT GTTCAGCTGC ATAAAACATC 000320 000321 ATGTATTCTA GGTATTTCCT ACCTTCACTT ACATTTTTAC TTGCCGATGT GCTGCCTTCA TAAATGGGTA TATTCCGCCA 000400 000401 CACATCTAGT AAGCCCCCAA TGCAGTACAC AATGTGTATC ACTGATAAAA CTCGCACTTC TGCCATGTCA GTATTATATT 000480 000481 CAGTTGAGTG GTCTTTAGCA TAGTGGCAGT CCTAGTCATC CTAACCTTTT AGTTAAGGTA AAATTACATA TGTTTATAGA 000560 000561 ACTCATATAG ACAAGCTAGT TTTTAAAATC TTCTTCCTTT TAACCAGTTT AGGATGATCT AAGATAGCTA AGTTACCTAC 000640 000641 ATGGTGACTG TTCGGTCTAA TTCAGAAACA GAAGTACTAA AAGAATACTA AAAAGTTTTT ACCCATTATC TCTATCCCTG 000720 000721 TTTTCTTTTT GCAATTCTCA GCTGCAGGGA GCAAGAAAAT ACACAGCAGA TAGGAAATGT TTGTTTGCAT CCTGGCTTTC 000800 000801 TCAACTGCAC TTTACGTCCT TGAATATTCT AGATATTTAC TCCTTCAAGA AGTCAGGAGT ATATCCAGGC CTACCTATCA 000880 000881 TCCTTGCCAT CCCCATTAAC CCTCATTTTT CAGTATGTGT TTTACATTTA TGGTTATTTT TCAGTCTATA GTATCTGTTC 000960 000961 ACTCATTGCT CTATCACATC TGAGTTTCTC CGTCTTTCTT TCCACTAGAT TGTAAGCTCC TTAAGGGCAA GGTCGGCATA 001040 001041 TAAGCAAAGT TCTGTAAACA CCGTGAAGGT ACCATGAGTT CTATGGGTAC TCAATAAATG CTTGTGATAA TGAAAAAAAA 001120 001121 AAAAAAAAAA AAAAAA |
Predicted Small Protein
| Name | NONHSAT092995_smProtein_776:898 |
| Length | 41 |
| Molecular weight | 4755.5419 |
| Aromaticity | 0.15 |
| Instability index | 58.985 |
| Isoelectric point | 7.85577392578 |
| Runs | 4 |
| Runs residual | 0.0780241935484 |
| Runs probability | 0.0306482953542 |
| Amino acid sequence | MFVCILAFSTALYVLEYSRYLLLQEVRSISRPTYHPCHPH |
| Secondary structure | LEEEHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL |
| PRMN | HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLL |
| PiMo | i??????????????????????????????????????? |
