Difference between revisions of "NONHSAT017738"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>aatccagtgcaacaagtgctgaagtagggggacatataagatgtggtggaaaacagaaaggaCCAATAGATGTTGCAGAAGGGGTGCAAGAGAAACCAGGGGAAGAGCACTACCACCTAAGGAAATGAGATGTGGGATATGGTGAAGATAACACATTTTTTTATAGAGGTTgttgagatatctaggtggttggtttggtttgaagctcaggggaaggtctgaaatggacagctttgggagttgctggcatgaatgagaatcaaagtcctagagaggtaagccttcccagagagtatgtaattaTCAGTTTTTCAGGAATCAAAACCTTTGCCCCATCCCACCTCCAGCTCAATGACCATTGCCCCTTCCTCAAAGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGCTATTGCAGTACAAGGCAGACATCA</dnaseq>| | sequence = <dnaseq>aatccagtgcaacaagtgctgaagtagggggacatataagatgtggtggaaaacagaaaggaCCAATAGATGTTGCAGAAGGGGTGCAAGAGAAACCAGGGGAAGAGCACTACCACCTAAGGAAATGAGATGTGGGATATGGTGAAGATAACACATTTTTTTATAGAGGTTgttgagatatctaggtggttggtttggtttgaagctcaggggaaggtctgaaatggacagctttgggagttgctggcatgaatgagaatcaaagtcctagagaggtaagccttcccagagagtatgtaattaTCAGTTTTTCAGGAATCAAAACCTTTGCCCCATCCCACCTCCAGCTCAATGACCATTGCCCCTTCCTCAAAGGGACGATCATGGCTTCTCCCCCTTGCACTGGGCCTGCCGAGAGGGCCGCTCTGCTGTGGTTGAGATGTTGATCATGCGGGGGGCACGGATCAATGTAATGAACCGTGGGGATGACACCCCCCTGCATCTGGCAGCCAGTCATGGACACCGTGATATTGTACAGAAGCTATTGCAGTACAAGGCAGACATCA</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG007539]] |
Revision as of 12:47, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT017738 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
566 nt |
| Genomic location |
chr11+:6628901..6629648 |
| Exon number |
2 |
| Exons |
6628901..6629441,6629624..6629648 |
| Genome context |
|
| Sequence |
000001 aatccagtgc aacaagtgct gaagtagggg gacatataag atgtggtgga aaacagaaag gaCCAATAGA TGTTGCAGAA 000080
000081 GGGGTGCAAG AGAAACCAGG GGAAGAGCAC TACCACCTAA GGAAATGAGA TGTGGGATAT GGTGAAGATA ACACATTTTT 000160 000161 TTATAGAGGT Tgttgagata tctaggtggt tggtttggtt tgaagctcag gggaaggtct gaaatggaca gctttgggag 000240 000241 ttgctggcat gaatgagaat caaagtccta gagaggtaag ccttcccaga gagtatgtaa ttaTCAGTTT TTCAGGAATC 000320 000321 AAAACCTTTG CCCCATCCCA CCTCCAGCTC AATGACCATT GCCCCTTCCT CAAAGGGACG ATCATGGCTT CTCCCCCTTG 000400 000401 CACTGGGCCT GCCGAGAGGG CCGCTCTGCT GTGGTTGAGA TGTTGATCAT GCGGGGGGCA CGGATCAATG TAATGAACCG 000480 000481 TGGGGATGAC ACCCCCCTGC ATCTGGCAGC CAGTCATGGA CACCGTGATA TTGTACAGAA GCTATTGCAG TACAAGGCAG 000560 000561 ACATCA |
Predicted Small Protein
| Name | NONHSAT017738_smProtein_248:445 |
| Length | 66 |
| Molecular weight | 7241.337 |
| Aromaticity | 0.0769230769231 |
| Instability index | 60.7230769231 |
| Isoelectric point | 7.76300048828 |
| Runs | 9 |
| Runs residual | 0.0118269230769 |
| Runs probability | 0.0432491314844 |
| Amino acid sequence | MNENQSPREVSLPREYVIISFSGIKTFAPSHLQLNDHCPFLKGTIMASPPCTGPAERAAL LWLRC |
| Secondary structure | LLLLLLLLEELLLLEEEEEEELLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLHHHHHHH HHHLL |
| PRMN | - |
| PiMo | - |
