Difference between revisions of "ENST00000541282.1"

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sequence = <dnaseq>TTTCATTTGTGATTCGGATGATGCAGCTCTAGGTGGATTGACTATGAAAGGCGCTGAATATCTTCAGGAAAATGGGTTCCATGAGAAGTGACATCCTCCTCGAATCAAAAGATTCTCAGGATGATGGAGTGAGTGATGGAATAGGTTGCCAACTGTAGTTACTCCACTCAGCACAGAATGGCTGCGGGGAAATATAATCAGACATGCCCAAAGAAGTCTGCTTAGGGTGAAACAAATACCTTTGAGGTTTAAATCAGGAAGGAGAGACTGTTTCTACAGGTGTCATACAAAAATCAATACTGAGCCAAGGATTATTGGATCCCATAGAACCACGGAGACTTGGTAGTGAAATTCTTCCAAAGCATTCCATCCGTGCAGGCAGATGGTGTTCCTAGGTTTGGAAATATAAATCCCATGGGAAGTCAGCTGAAGACCATTTTATGCATCACTCATCCTGTTAGAGCCCTGTGCTGTTCTGTCTCTCTATAAGACTGGCTGAAACCACCACGGTTGTTTACAATTTATGCTCTAACTTTGGATCACCTAGTTAATACTCTAACTCCGATTATTACCAAAGACAATGTTCTATAAAAGATATTGTCTATTAGAAGGATGCTTCTGCATTATTAATAAAATCACAGGGAAAATGCAACATTTTGGATGTCACATCTGATAAGTTGGCAGTTAAAGAACAGAAACAGCAATAAGACTGCGTGGCTACATTTTCCCAGTGCCACCAACTGGGATTTAAGCTGACTAACATTTTGAAAGCCCAGCCCATTTCATTCACAGCAGGATGGCAGTGGGTGACTGATCGTACCCGCCAGCTGGCTAATGTCATAATTAACAAAGTTGCTACTACATCTGCAAAGTTTAATCGAAAAATTTGCCAGTGATATGATGGCCTTGTCACAGAGATCACAAGGGACACGGAGTTGACTTTTGCTCAAGGTGGAACGACAGAGCTGTGTAGGCAAGATGAGAAATTGCGAACTTGTTCGGCCAAAGGATTATCTCCTGAGATGTGTAGAAATGAACTCTTGTCAGAGTTTCAAAGGAATTAACGTTTTTTGGTAAAATGTGCTAATGTAAAGAGTGAGAAGATTAGTGATACATAATGAAAGCAATGCATTCTTTCACATGGAAATGGGAATATAATAAATGTCCTGCAGGTGATTGGGGCTGTAGCAATTTTATTGAAGATTAAAGTTTGATTGACCTTTGTTAGGGTGATTAACCCTTCTGAAATTAAAAGCCAGAGCTGAATTATTCTGCTCAATTTAAATGCAAACATCGAGCAGGTCGTATGTCATTCAAATAATAATAAGAAGAAAATCTTCCTATTTTAATTTTCATTTTTGCACTTCTGAGTGGTATGCTGCTTTAGAAGGACCATAGCTCTCGCAAAAGCATTCTGGTGGCAGAGAATATACAATAACGTTACAGATAATTGGGAGCATATAGGAAGAGTCCCAAGCACTACTGCCTGCATTCGAAACATCAAAACCACCATCCCAACAAAAGCACGGAGCATGAAGCCAATCTCTGTACACTGAAAATGCATGCTCCCAATAGAAAAACAACCTAGGGATGTCCTGAAGGGGTTAGGAATAAATAACAATGACATCTCTATTCTAGTTCAGTGCCAACCACCGAAATTGCATATCATATCCATGTTAAATCTACATGATGTCTCCTGGAAATGCGTGCTTTTTGGTACAGTTGCTTATGAAGCAGTTTCTAAAAGTTGATTATTTCTGATGTCTGGAATTTCATTCTCCATGATCTCTGGCAGTTTCTGAATATATTCAGTATTTTCATTAAGTTCAAAAATGCTGTAGGAGAAGCTAACGAATTATTTGCAATGCCATTTAATGGTTTAGTTTTATTTTTCTCTGTTAAATTTTCTAAGCCTTGGTGAAAAGTTGTGTATTCACATTTCTTCAAAAAACTGTTTCCATTTTTCATATCATGTTAATTTTGTTTAGTTCTAAGTCAGTGAATATTTTTAGTCTTAGGTCCCACCACATAGTGAATGTGTCTGCCTTTTATGTATCTGTGAACTATTAAAATGATAATAAAGGTTCTCTTCCTTCCAT</dnaseq>|
 
sequence = <dnaseq>TTTCATTTGTGATTCGGATGATGCAGCTCTAGGTGGATTGACTATGAAAGGCGCTGAATATCTTCAGGAAAATGGGTTCCATGAGAAGTGACATCCTCCTCGAATCAAAAGATTCTCAGGATGATGGAGTGAGTGATGGAATAGGTTGCCAACTGTAGTTACTCCACTCAGCACAGAATGGCTGCGGGGAAATATAATCAGACATGCCCAAAGAAGTCTGCTTAGGGTGAAACAAATACCTTTGAGGTTTAAATCAGGAAGGAGAGACTGTTTCTACAGGTGTCATACAAAAATCAATACTGAGCCAAGGATTATTGGATCCCATAGAACCACGGAGACTTGGTAGTGAAATTCTTCCAAAGCATTCCATCCGTGCAGGCAGATGGTGTTCCTAGGTTTGGAAATATAAATCCCATGGGAAGTCAGCTGAAGACCATTTTATGCATCACTCATCCTGTTAGAGCCCTGTGCTGTTCTGTCTCTCTATAAGACTGGCTGAAACCACCACGGTTGTTTACAATTTATGCTCTAACTTTGGATCACCTAGTTAATACTCTAACTCCGATTATTACCAAAGACAATGTTCTATAAAAGATATTGTCTATTAGAAGGATGCTTCTGCATTATTAATAAAATCACAGGGAAAATGCAACATTTTGGATGTCACATCTGATAAGTTGGCAGTTAAAGAACAGAAACAGCAATAAGACTGCGTGGCTACATTTTCCCAGTGCCACCAACTGGGATTTAAGCTGACTAACATTTTGAAAGCCCAGCCCATTTCATTCACAGCAGGATGGCAGTGGGTGACTGATCGTACCCGCCAGCTGGCTAATGTCATAATTAACAAAGTTGCTACTACATCTGCAAAGTTTAATCGAAAAATTTGCCAGTGATATGATGGCCTTGTCACAGAGATCACAAGGGACACGGAGTTGACTTTTGCTCAAGGTGGAACGACAGAGCTGTGTAGGCAAGATGAGAAATTGCGAACTTGTTCGGCCAAAGGATTATCTCCTGAGATGTGTAGAAATGAACTCTTGTCAGAGTTTCAAAGGAATTAACGTTTTTTGGTAAAATGTGCTAATGTAAAGAGTGAGAAGATTAGTGATACATAATGAAAGCAATGCATTCTTTCACATGGAAATGGGAATATAATAAATGTCCTGCAGGTGATTGGGGCTGTAGCAATTTTATTGAAGATTAAAGTTTGATTGACCTTTGTTAGGGTGATTAACCCTTCTGAAATTAAAAGCCAGAGCTGAATTATTCTGCTCAATTTAAATGCAAACATCGAGCAGGTCGTATGTCATTCAAATAATAATAAGAAGAAAATCTTCCTATTTTAATTTTCATTTTTGCACTTCTGAGTGGTATGCTGCTTTAGAAGGACCATAGCTCTCGCAAAAGCATTCTGGTGGCAGAGAATATACAATAACGTTACAGATAATTGGGAGCATATAGGAAGAGTCCCAAGCACTACTGCCTGCATTCGAAACATCAAAACCACCATCCCAACAAAAGCACGGAGCATGAAGCCAATCTCTGTACACTGAAAATGCATGCTCCCAATAGAAAAACAACCTAGGGATGTCCTGAAGGGGTTAGGAATAAATAACAATGACATCTCTATTCTAGTTCAGTGCCAACCACCGAAATTGCATATCATATCCATGTTAAATCTACATGATGTCTCCTGGAAATGCGTGCTTTTTGGTACAGTTGCTTATGAAGCAGTTTCTAAAAGTTGATTATTTCTGATGTCTGGAATTTCATTCTCCATGATCTCTGGCAGTTTCTGAATATATTCAGTATTTTCATTAAGTTCAAAAATGCTGTAGGAGAAGCTAACGAATTATTTGCAATGCCATTTAATGGTTTAGTTTTATTTTTCTCTGTTAAATTTTCTAAGCCTTGGTGAAAAGTTGTGTATTCACATTTCTTCAAAAAACTGTTTCCATTTTTCATATCATGTTAATTTTGTTTAGTTCTAAGTCAGTGAATATTTTTAGTCTTAGGTCCCACCACATAGTGAATGTGTCTGCCTTTTATGTATCTGTGAACTATTAAAATGATAATAAAGGTTCTCTTCCTTCCAT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000255794.2]]
+
[[Category:Intergenic]][[Category:ENSG00000255794.2]][[Category:lnc-NEDD1-4]]

Revision as of 12:50, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000541282.1

Source

Gencode19

Same with

lnc-NEDD1-4:2

Classification

intergenic

Length

2099 nt

Genomic location

chr12+:97858799..97927544

Exon number

9

Exons

97858799..97858849,97859446..97859505,97886239..97886384,97886959..97887063,97887653..97887780,97888473..97888659,97889709..97889834,97924433..97924637,97926454..97927544

Genome context

Sequence
000001 TTTCATTTGT GATTCGGATG ATGCAGCTCT AGGTGGATTG ACTATGAAAG GCGCTGAATA TCTTCAGGAA AATGGGTTCC 000080
000081 ATGAGAAGTG ACATCCTCCT CGAATCAAAA GATTCTCAGG ATGATGGAGT GAGTGATGGA ATAGGTTGCC AACTGTAGTT 000160
000161 ACTCCACTCA GCACAGAATG GCTGCGGGGA AATATAATCA GACATGCCCA AAGAAGTCTG CTTAGGGTGA AACAAATACC 000240
000241 TTTGAGGTTT AAATCAGGAA GGAGAGACTG TTTCTACAGG TGTCATACAA AAATCAATAC TGAGCCAAGG ATTATTGGAT 000320
000321 CCCATAGAAC CACGGAGACT TGGTAGTGAA ATTCTTCCAA AGCATTCCAT CCGTGCAGGC AGATGGTGTT CCTAGGTTTG 000400
000401 GAAATATAAA TCCCATGGGA AGTCAGCTGA AGACCATTTT ATGCATCACT CATCCTGTTA GAGCCCTGTG CTGTTCTGTC 000480
000481 TCTCTATAAG ACTGGCTGAA ACCACCACGG TTGTTTACAA TTTATGCTCT AACTTTGGAT CACCTAGTTA ATACTCTAAC 000560
000561 TCCGATTATT ACCAAAGACA ATGTTCTATA AAAGATATTG TCTATTAGAA GGATGCTTCT GCATTATTAA TAAAATCACA 000640
000641 GGGAAAATGC AACATTTTGG ATGTCACATC TGATAAGTTG GCAGTTAAAG AACAGAAACA GCAATAAGAC TGCGTGGCTA 000720
000721 CATTTTCCCA GTGCCACCAA CTGGGATTTA AGCTGACTAA CATTTTGAAA GCCCAGCCCA TTTCATTCAC AGCAGGATGG 000800
000801 CAGTGGGTGA CTGATCGTAC CCGCCAGCTG GCTAATGTCA TAATTAACAA AGTTGCTACT ACATCTGCAA AGTTTAATCG 000880
000881 AAAAATTTGC CAGTGATATG ATGGCCTTGT CACAGAGATC ACAAGGGACA CGGAGTTGAC TTTTGCTCAA GGTGGAACGA 000960
000961 CAGAGCTGTG TAGGCAAGAT GAGAAATTGC GAACTTGTTC GGCCAAAGGA TTATCTCCTG AGATGTGTAG AAATGAACTC 001040
001041 TTGTCAGAGT TTCAAAGGAA TTAACGTTTT TTGGTAAAAT GTGCTAATGT AAAGAGTGAG AAGATTAGTG ATACATAATG 001120
001121 AAAGCAATGC ATTCTTTCAC ATGGAAATGG GAATATAATA AATGTCCTGC AGGTGATTGG GGCTGTAGCA ATTTTATTGA 001200
001201 AGATTAAAGT TTGATTGACC TTTGTTAGGG TGATTAACCC TTCTGAAATT AAAAGCCAGA GCTGAATTAT TCTGCTCAAT 001280
001281 TTAAATGCAA ACATCGAGCA GGTCGTATGT CATTCAAATA ATAATAAGAA GAAAATCTTC CTATTTTAAT TTTCATTTTT 001360
001361 GCACTTCTGA GTGGTATGCT GCTTTAGAAG GACCATAGCT CTCGCAAAAG CATTCTGGTG GCAGAGAATA TACAATAACG 001440
001441 TTACAGATAA TTGGGAGCAT ATAGGAAGAG TCCCAAGCAC TACTGCCTGC ATTCGAAACA TCAAAACCAC CATCCCAACA 001520
001521 AAAGCACGGA GCATGAAGCC AATCTCTGTA CACTGAAAAT GCATGCTCCC AATAGAAAAA CAACCTAGGG ATGTCCTGAA 001600
001601 GGGGTTAGGA ATAAATAACA ATGACATCTC TATTCTAGTT CAGTGCCAAC CACCGAAATT GCATATCATA TCCATGTTAA 001680
001681 ATCTACATGA TGTCTCCTGG AAATGCGTGC TTTTTGGTAC AGTTGCTTAT GAAGCAGTTT CTAAAAGTTG ATTATTTCTG 001760
001761 ATGTCTGGAA TTTCATTCTC CATGATCTCT GGCAGTTTCT GAATATATTC AGTATTTTCA TTAAGTTCAA AAATGCTGTA 001840
001841 GGAGAAGCTA ACGAATTATT TGCAATGCCA TTTAATGGTT TAGTTTTATT TTTCTCTGTT AAATTTTCTA AGCCTTGGTG 001920
001921 AAAAGTTGTG TATTCACATT TCTTCAAAAA ACTGTTTCCA TTTTTCATAT CATGTTAATT TTGTTTAGTT CTAAGTCAGT 002000
002001 GAATATTTTT AGTCTTAGGT CCCACCACAT AGTGAATGTG TCTGCCTTTT ATGTATCTGT GAACTATTAA AATGATAATA 002080
002081 AAGGTTCTCT TCCTTCCAT
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