Difference between revisions of "ENST00000541282.1"
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sequence = <dnaseq>TTTCATTTGTGATTCGGATGATGCAGCTCTAGGTGGATTGACTATGAAAGGCGCTGAATATCTTCAGGAAAATGGGTTCCATGAGAAGTGACATCCTCCTCGAATCAAAAGATTCTCAGGATGATGGAGTGAGTGATGGAATAGGTTGCCAACTGTAGTTACTCCACTCAGCACAGAATGGCTGCGGGGAAATATAATCAGACATGCCCAAAGAAGTCTGCTTAGGGTGAAACAAATACCTTTGAGGTTTAAATCAGGAAGGAGAGACTGTTTCTACAGGTGTCATACAAAAATCAATACTGAGCCAAGGATTATTGGATCCCATAGAACCACGGAGACTTGGTAGTGAAATTCTTCCAAAGCATTCCATCCGTGCAGGCAGATGGTGTTCCTAGGTTTGGAAATATAAATCCCATGGGAAGTCAGCTGAAGACCATTTTATGCATCACTCATCCTGTTAGAGCCCTGTGCTGTTCTGTCTCTCTATAAGACTGGCTGAAACCACCACGGTTGTTTACAATTTATGCTCTAACTTTGGATCACCTAGTTAATACTCTAACTCCGATTATTACCAAAGACAATGTTCTATAAAAGATATTGTCTATTAGAAGGATGCTTCTGCATTATTAATAAAATCACAGGGAAAATGCAACATTTTGGATGTCACATCTGATAAGTTGGCAGTTAAAGAACAGAAACAGCAATAAGACTGCGTGGCTACATTTTCCCAGTGCCACCAACTGGGATTTAAGCTGACTAACATTTTGAAAGCCCAGCCCATTTCATTCACAGCAGGATGGCAGTGGGTGACTGATCGTACCCGCCAGCTGGCTAATGTCATAATTAACAAAGTTGCTACTACATCTGCAAAGTTTAATCGAAAAATTTGCCAGTGATATGATGGCCTTGTCACAGAGATCACAAGGGACACGGAGTTGACTTTTGCTCAAGGTGGAACGACAGAGCTGTGTAGGCAAGATGAGAAATTGCGAACTTGTTCGGCCAAAGGATTATCTCCTGAGATGTGTAGAAATGAACTCTTGTCAGAGTTTCAAAGGAATTAACGTTTTTTGGTAAAATGTGCTAATGTAAAGAGTGAGAAGATTAGTGATACATAATGAAAGCAATGCATTCTTTCACATGGAAATGGGAATATAATAAATGTCCTGCAGGTGATTGGGGCTGTAGCAATTTTATTGAAGATTAAAGTTTGATTGACCTTTGTTAGGGTGATTAACCCTTCTGAAATTAAAAGCCAGAGCTGAATTATTCTGCTCAATTTAAATGCAAACATCGAGCAGGTCGTATGTCATTCAAATAATAATAAGAAGAAAATCTTCCTATTTTAATTTTCATTTTTGCACTTCTGAGTGGTATGCTGCTTTAGAAGGACCATAGCTCTCGCAAAAGCATTCTGGTGGCAGAGAATATACAATAACGTTACAGATAATTGGGAGCATATAGGAAGAGTCCCAAGCACTACTGCCTGCATTCGAAACATCAAAACCACCATCCCAACAAAAGCACGGAGCATGAAGCCAATCTCTGTACACTGAAAATGCATGCTCCCAATAGAAAAACAACCTAGGGATGTCCTGAAGGGGTTAGGAATAAATAACAATGACATCTCTATTCTAGTTCAGTGCCAACCACCGAAATTGCATATCATATCCATGTTAAATCTACATGATGTCTCCTGGAAATGCGTGCTTTTTGGTACAGTTGCTTATGAAGCAGTTTCTAAAAGTTGATTATTTCTGATGTCTGGAATTTCATTCTCCATGATCTCTGGCAGTTTCTGAATATATTCAGTATTTTCATTAAGTTCAAAAATGCTGTAGGAGAAGCTAACGAATTATTTGCAATGCCATTTAATGGTTTAGTTTTATTTTTCTCTGTTAAATTTTCTAAGCCTTGGTGAAAAGTTGTGTATTCACATTTCTTCAAAAAACTGTTTCCATTTTTCATATCATGTTAATTTTGTTTAGTTCTAAGTCAGTGAATATTTTTAGTCTTAGGTCCCACCACATAGTGAATGTGTCTGCCTTTTATGTATCTGTGAACTATTAAAATGATAATAAAGGTTCTCTTCCTTCCAT</dnaseq>| | sequence = <dnaseq>TTTCATTTGTGATTCGGATGATGCAGCTCTAGGTGGATTGACTATGAAAGGCGCTGAATATCTTCAGGAAAATGGGTTCCATGAGAAGTGACATCCTCCTCGAATCAAAAGATTCTCAGGATGATGGAGTGAGTGATGGAATAGGTTGCCAACTGTAGTTACTCCACTCAGCACAGAATGGCTGCGGGGAAATATAATCAGACATGCCCAAAGAAGTCTGCTTAGGGTGAAACAAATACCTTTGAGGTTTAAATCAGGAAGGAGAGACTGTTTCTACAGGTGTCATACAAAAATCAATACTGAGCCAAGGATTATTGGATCCCATAGAACCACGGAGACTTGGTAGTGAAATTCTTCCAAAGCATTCCATCCGTGCAGGCAGATGGTGTTCCTAGGTTTGGAAATATAAATCCCATGGGAAGTCAGCTGAAGACCATTTTATGCATCACTCATCCTGTTAGAGCCCTGTGCTGTTCTGTCTCTCTATAAGACTGGCTGAAACCACCACGGTTGTTTACAATTTATGCTCTAACTTTGGATCACCTAGTTAATACTCTAACTCCGATTATTACCAAAGACAATGTTCTATAAAAGATATTGTCTATTAGAAGGATGCTTCTGCATTATTAATAAAATCACAGGGAAAATGCAACATTTTGGATGTCACATCTGATAAGTTGGCAGTTAAAGAACAGAAACAGCAATAAGACTGCGTGGCTACATTTTCCCAGTGCCACCAACTGGGATTTAAGCTGACTAACATTTTGAAAGCCCAGCCCATTTCATTCACAGCAGGATGGCAGTGGGTGACTGATCGTACCCGCCAGCTGGCTAATGTCATAATTAACAAAGTTGCTACTACATCTGCAAAGTTTAATCGAAAAATTTGCCAGTGATATGATGGCCTTGTCACAGAGATCACAAGGGACACGGAGTTGACTTTTGCTCAAGGTGGAACGACAGAGCTGTGTAGGCAAGATGAGAAATTGCGAACTTGTTCGGCCAAAGGATTATCTCCTGAGATGTGTAGAAATGAACTCTTGTCAGAGTTTCAAAGGAATTAACGTTTTTTGGTAAAATGTGCTAATGTAAAGAGTGAGAAGATTAGTGATACATAATGAAAGCAATGCATTCTTTCACATGGAAATGGGAATATAATAAATGTCCTGCAGGTGATTGGGGCTGTAGCAATTTTATTGAAGATTAAAGTTTGATTGACCTTTGTTAGGGTGATTAACCCTTCTGAAATTAAAAGCCAGAGCTGAATTATTCTGCTCAATTTAAATGCAAACATCGAGCAGGTCGTATGTCATTCAAATAATAATAAGAAGAAAATCTTCCTATTTTAATTTTCATTTTTGCACTTCTGAGTGGTATGCTGCTTTAGAAGGACCATAGCTCTCGCAAAAGCATTCTGGTGGCAGAGAATATACAATAACGTTACAGATAATTGGGAGCATATAGGAAGAGTCCCAAGCACTACTGCCTGCATTCGAAACATCAAAACCACCATCCCAACAAAAGCACGGAGCATGAAGCCAATCTCTGTACACTGAAAATGCATGCTCCCAATAGAAAAACAACCTAGGGATGTCCTGAAGGGGTTAGGAATAAATAACAATGACATCTCTATTCTAGTTCAGTGCCAACCACCGAAATTGCATATCATATCCATGTTAAATCTACATGATGTCTCCTGGAAATGCGTGCTTTTTGGTACAGTTGCTTATGAAGCAGTTTCTAAAAGTTGATTATTTCTGATGTCTGGAATTTCATTCTCCATGATCTCTGGCAGTTTCTGAATATATTCAGTATTTTCATTAAGTTCAAAAATGCTGTAGGAGAAGCTAACGAATTATTTGCAATGCCATTTAATGGTTTAGTTTTATTTTTCTCTGTTAAATTTTCTAAGCCTTGGTGAAAAGTTGTGTATTCACATTTCTTCAAAAAACTGTTTCCATTTTTCATATCATGTTAATTTTGTTTAGTTCTAAGTCAGTGAATATTTTTAGTCTTAGGTCCCACCACATAGTGAATGTGTCTGCCTTTTATGTATCTGTGAACTATTAAAATGATAATAAAGGTTCTCTTCCTTCCAT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:ENSG00000255794.2]] | + | [[Category:Intergenic]][[Category:ENSG00000255794.2]][[Category:lnc-NEDD1-4]] |
Revision as of 12:50, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000541282.1 |
Source |
Gencode19 |
Same with |
lnc-NEDD1-4:2 |
Classification |
intergenic |
Length |
2099 nt |
Genomic location |
chr12+:97858799..97927544 |
Exon number |
9 |
Exons |
97858799..97858849,97859446..97859505,97886239..97886384,97886959..97887063,97887653..97887780,97888473..97888659,97889709..97889834,97924433..97924637,97926454..97927544 |
Genome context |
|
Sequence |
000001 TTTCATTTGT GATTCGGATG ATGCAGCTCT AGGTGGATTG ACTATGAAAG GCGCTGAATA TCTTCAGGAA AATGGGTTCC 000080
000081 ATGAGAAGTG ACATCCTCCT CGAATCAAAA GATTCTCAGG ATGATGGAGT GAGTGATGGA ATAGGTTGCC AACTGTAGTT 000160 000161 ACTCCACTCA GCACAGAATG GCTGCGGGGA AATATAATCA GACATGCCCA AAGAAGTCTG CTTAGGGTGA AACAAATACC 000240 000241 TTTGAGGTTT AAATCAGGAA GGAGAGACTG TTTCTACAGG TGTCATACAA AAATCAATAC TGAGCCAAGG ATTATTGGAT 000320 000321 CCCATAGAAC CACGGAGACT TGGTAGTGAA ATTCTTCCAA AGCATTCCAT CCGTGCAGGC AGATGGTGTT CCTAGGTTTG 000400 000401 GAAATATAAA TCCCATGGGA AGTCAGCTGA AGACCATTTT ATGCATCACT CATCCTGTTA GAGCCCTGTG CTGTTCTGTC 000480 000481 TCTCTATAAG ACTGGCTGAA ACCACCACGG TTGTTTACAA TTTATGCTCT AACTTTGGAT CACCTAGTTA ATACTCTAAC 000560 000561 TCCGATTATT ACCAAAGACA ATGTTCTATA AAAGATATTG TCTATTAGAA GGATGCTTCT GCATTATTAA TAAAATCACA 000640 000641 GGGAAAATGC AACATTTTGG ATGTCACATC TGATAAGTTG GCAGTTAAAG AACAGAAACA GCAATAAGAC TGCGTGGCTA 000720 000721 CATTTTCCCA GTGCCACCAA CTGGGATTTA AGCTGACTAA CATTTTGAAA GCCCAGCCCA TTTCATTCAC AGCAGGATGG 000800 000801 CAGTGGGTGA CTGATCGTAC CCGCCAGCTG GCTAATGTCA TAATTAACAA AGTTGCTACT ACATCTGCAA AGTTTAATCG 000880 000881 AAAAATTTGC CAGTGATATG ATGGCCTTGT CACAGAGATC ACAAGGGACA CGGAGTTGAC TTTTGCTCAA GGTGGAACGA 000960 000961 CAGAGCTGTG TAGGCAAGAT GAGAAATTGC GAACTTGTTC GGCCAAAGGA TTATCTCCTG AGATGTGTAG AAATGAACTC 001040 001041 TTGTCAGAGT TTCAAAGGAA TTAACGTTTT TTGGTAAAAT GTGCTAATGT AAAGAGTGAG AAGATTAGTG ATACATAATG 001120 001121 AAAGCAATGC ATTCTTTCAC ATGGAAATGG GAATATAATA AATGTCCTGC AGGTGATTGG GGCTGTAGCA ATTTTATTGA 001200 001201 AGATTAAAGT TTGATTGACC TTTGTTAGGG TGATTAACCC TTCTGAAATT AAAAGCCAGA GCTGAATTAT TCTGCTCAAT 001280 001281 TTAAATGCAA ACATCGAGCA GGTCGTATGT CATTCAAATA ATAATAAGAA GAAAATCTTC CTATTTTAAT TTTCATTTTT 001360 001361 GCACTTCTGA GTGGTATGCT GCTTTAGAAG GACCATAGCT CTCGCAAAAG CATTCTGGTG GCAGAGAATA TACAATAACG 001440 001441 TTACAGATAA TTGGGAGCAT ATAGGAAGAG TCCCAAGCAC TACTGCCTGC ATTCGAAACA TCAAAACCAC CATCCCAACA 001520 001521 AAAGCACGGA GCATGAAGCC AATCTCTGTA CACTGAAAAT GCATGCTCCC AATAGAAAAA CAACCTAGGG ATGTCCTGAA 001600 001601 GGGGTTAGGA ATAAATAACA ATGACATCTC TATTCTAGTT CAGTGCCAAC CACCGAAATT GCATATCATA TCCATGTTAA 001680 001681 ATCTACATGA TGTCTCCTGG AAATGCGTGC TTTTTGGTAC AGTTGCTTAT GAAGCAGTTT CTAAAAGTTG ATTATTTCTG 001760 001761 ATGTCTGGAA TTTCATTCTC CATGATCTCT GGCAGTTTCT GAATATATTC AGTATTTTCA TTAAGTTCAA AAATGCTGTA 001840 001841 GGAGAAGCTA ACGAATTATT TGCAATGCCA TTTAATGGTT TAGTTTTATT TTTCTCTGTT AAATTTTCTA AGCCTTGGTG 001920 001921 AAAAGTTGTG TATTCACATT TCTTCAAAAA ACTGTTTCCA TTTTTCATAT CATGTTAATT TTGTTTAGTT CTAAGTCAGT 002000 002001 GAATATTTTT AGTCTTAGGT CCCACCACAT AGTGAATGTG TCTGCCTTTT ATGTATCTGT GAACTATTAA AATGATAATA 002080 002081 AAGGTTCTCT TCCTTCCAT |