Difference between revisions of "Lnc-MYOCD-2:4"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
Line 42: | Line 42: | ||
sequence = <dnaseq>AGTTGAAATAACTCCTTCGTGGAGGCTGGCTACATTTTCACAACGTCTGGTCCCAAGCTAGATCTTCGGGAAAAGGGATCAAGGAAATGACTATTCCTCCAAATAAAATGCAACAAGAAGAATGAAAAAACGTAGAAGAGAAAGCCTCGTGAAACTGAGAAGCATCTGCAACCACAAACTACAAAATGTAGCTGCTAAACAAAATGAAAGTTGGATCAAAGTGGTGGCAAATATCAAGAGTGAATATACTCCACGGCAGAGTACTGCAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACAAGCTTCCACCATGAAGGGTTGTCATTTGCCATAGCAGGGAGAGGAAAATGGAGCAAATCAGTCACCAGCTCGTCATACAGAAGAGTGTCCCACGTCATATCTGCTGATATGTTATGGCCAAAGTACATGACTATCTCCAAGGAGCTGAGAGGTGAAATTCGGACATTTGTCTGGACGGAGTAGAACCAAGAGAGTCGTAAACATCCTGTGGACTACACACCGTTTAACAAGATGCAACAGTATTCTGGCTTTGCCTTTCCTGGAGCCCTTAAACAGGCTGAAGTGAAAAGCACCATGACCTGTCACTACAAGACGAGAAGCCTCAGGAGAAGGAAGGAGATCCCTTTTCATTGGTTTTGCCGAGTTTCCCGAGCTCCATCCTCCTACAGTTAAATCAACACTCTTTATCCTTAGACTGCTGATAATCTCACCAACCGCTTCCTGGTAAGATCTGTAATGCGTGAGGTCTTCCTTCTTAGTTGTTTGCAAACATCAGTGATTAGGGACAATTAGGGACTGGTGTGCCTGTCATTCTTCTCCTTTCAGCTGAGGAGGAAATCCTCATGCACCGTTATCGGGAGTGAGACTTCATCTGTCAGCTGCAGTCTCAGGAATCCACGGGTTCATTCAGTCGCAACTCTAATCTCACTAACTTTATCTGTGTTCCTCAAATGCCTTAGACTATTTGCTTCCCACTGATAGGGAAACCTGACATCTCATTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAAGATAGGTGTTACAGAACATGGAGGGAACCAGGAAAACCAAATAGAGGACCCCCTTCATGGGGCTTCCAACACGACAATAGGCAAAAGAGAAGAAACATACATGTAAGAGACAAGCAAAACCCAGAACCATCACTTATGAAGGATGTCCTCATCACCCTCTTTTGCTGCCTGTCAAAACCGGTGAGGGCTCATATGACACCTTAATTATGAATTAATCTTCGTTCCTCCTACACCAGCACTTCCCCTCACCCCAGTCGAAGCCATCTCTTTATATTTCCATAGCTTAAAATGCTATTTTTGGTTCTAGATGCTTTGCCTCTAGATTTGGATACTGCATCCATATTGTTGTATATTTTTTCCTTTCTATCTTTTCCACAATGTTTTTTTTTTTTAACTTTTAAGTTTAGGGGTCCAAGTGCAGGTTTGTTACATAGGTAAACTTGTGTCATGGGGGCTTGTTGTACAGATTATTTCATCACCAAGATATTAAGCCTAGTACCCATTAGTTACGTCTTTCTTCTCCCACCCTCCACCTTCCAAAAGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACGTGCGGTATCTGGCTTTCTGTCCCTACGTTAGTTTGCTAAGGATGATGGGCTCCAGCTTCATCCATGTCCCTGCAAAGGACATGGTCTTGTCCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTACCAATTTTGCTTTATTCAGTCTACCATCGATGGGCATTTAGGTTGATTCAATGTCTTTGCTATTGTGAATAGTGCTGCAATGAACATACACGTGCAGGTGTCTTTATCATAGAATTATTTATATTCCTTTGGGTATATATCCAGTAATGGGATTGCTGGGTTGAATGGTAGTTCTGTCTGTAGGTATTTGAAGGATCACCACACTGTCTTCCGCAGTGGCTGAACTAATTTACACTCCCACCGGCAGGGTCAAAGCATTTCTTTTTCTCCACAACCTCGCCAGTGCCTGTTGTTTTTTGACTTTTTAATAATAGCCATTCTGACTGGCGTTAGATGGTATCTTGTGGTTTTGATTTGCATTTCTCTAATGACCAGTGATGTTGAGCTTTTTCTCATGTGATTTTCAGCCACATACATGTCTTCCTTTGAAAAGTGTTCATGTCCTTTGCCCACTTCTTTATGTGGTTGTTTGTTTTTTTCTTGTAAATTTATTTAAGTTCATTATAGATGCTGGATGTTAGACCTTTGTCAGATGCATAGTTTGCAAAAATTTTCTCCCATTCTGTAGGTTGTCTGTTTACTCTGTTGATAGTTTCTTTTGCTATTCCACAATGTTTTGTGCAAGATAAGTGCTTAGCAAATGCTTGTAAAGGAATGCCTGCACCAGGAAAGTCCAATAGCTATGAATAAAGAAAGAAAGGACAAGTTCCAGGGGAGGTGATTTTTTTTTCATTTTCATTTTTTTAGACAGCTTTTAAAGGAATGGAGTAGCATGTTCTTCTGGAGCAGGAGTTACAAATTGGACCTCTAAGGGCCACATTCAGCCTATCCACATGGTTGCAGCACTGACAGAGTGTTTTGAAATTTTAAACTCTGAATACTTGTAGATAACATATGCATGCCACAATAAACTGCATTTCCATC</dnaseq>| | sequence = <dnaseq>AGTTGAAATAACTCCTTCGTGGAGGCTGGCTACATTTTCACAACGTCTGGTCCCAAGCTAGATCTTCGGGAAAAGGGATCAAGGAAATGACTATTCCTCCAAATAAAATGCAACAAGAAGAATGAAAAAACGTAGAAGAGAAAGCCTCGTGAAACTGAGAAGCATCTGCAACCACAAACTACAAAATGTAGCTGCTAAACAAAATGAAAGTTGGATCAAAGTGGTGGCAAATATCAAGAGTGAATATACTCCACGGCAGAGTACTGCAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACAAGCTTCCACCATGAAGGGTTGTCATTTGCCATAGCAGGGAGAGGAAAATGGAGCAAATCAGTCACCAGCTCGTCATACAGAAGAGTGTCCCACGTCATATCTGCTGATATGTTATGGCCAAAGTACATGACTATCTCCAAGGAGCTGAGAGGTGAAATTCGGACATTTGTCTGGACGGAGTAGAACCAAGAGAGTCGTAAACATCCTGTGGACTACACACCGTTTAACAAGATGCAACAGTATTCTGGCTTTGCCTTTCCTGGAGCCCTTAAACAGGCTGAAGTGAAAAGCACCATGACCTGTCACTACAAGACGAGAAGCCTCAGGAGAAGGAAGGAGATCCCTTTTCATTGGTTTTGCCGAGTTTCCCGAGCTCCATCCTCCTACAGTTAAATCAACACTCTTTATCCTTAGACTGCTGATAATCTCACCAACCGCTTCCTGGTAAGATCTGTAATGCGTGAGGTCTTCCTTCTTAGTTGTTTGCAAACATCAGTGATTAGGGACAATTAGGGACTGGTGTGCCTGTCATTCTTCTCCTTTCAGCTGAGGAGGAAATCCTCATGCACCGTTATCGGGAGTGAGACTTCATCTGTCAGCTGCAGTCTCAGGAATCCACGGGTTCATTCAGTCGCAACTCTAATCTCACTAACTTTATCTGTGTTCCTCAAATGCCTTAGACTATTTGCTTCCCACTGATAGGGAAACCTGACATCTCATTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAAGATAGGTGTTACAGAACATGGAGGGAACCAGGAAAACCAAATAGAGGACCCCCTTCATGGGGCTTCCAACACGACAATAGGCAAAAGAGAAGAAACATACATGTAAGAGACAAGCAAAACCCAGAACCATCACTTATGAAGGATGTCCTCATCACCCTCTTTTGCTGCCTGTCAAAACCGGTGAGGGCTCATATGACACCTTAATTATGAATTAATCTTCGTTCCTCCTACACCAGCACTTCCCCTCACCCCAGTCGAAGCCATCTCTTTATATTTCCATAGCTTAAAATGCTATTTTTGGTTCTAGATGCTTTGCCTCTAGATTTGGATACTGCATCCATATTGTTGTATATTTTTTCCTTTCTATCTTTTCCACAATGTTTTTTTTTTTTAACTTTTAAGTTTAGGGGTCCAAGTGCAGGTTTGTTACATAGGTAAACTTGTGTCATGGGGGCTTGTTGTACAGATTATTTCATCACCAAGATATTAAGCCTAGTACCCATTAGTTACGTCTTTCTTCTCCCACCCTCCACCTTCCAAAAGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACGTGCGGTATCTGGCTTTCTGTCCCTACGTTAGTTTGCTAAGGATGATGGGCTCCAGCTTCATCCATGTCCCTGCAAAGGACATGGTCTTGTCCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTACCAATTTTGCTTTATTCAGTCTACCATCGATGGGCATTTAGGTTGATTCAATGTCTTTGCTATTGTGAATAGTGCTGCAATGAACATACACGTGCAGGTGTCTTTATCATAGAATTATTTATATTCCTTTGGGTATATATCCAGTAATGGGATTGCTGGGTTGAATGGTAGTTCTGTCTGTAGGTATTTGAAGGATCACCACACTGTCTTCCGCAGTGGCTGAACTAATTTACACTCCCACCGGCAGGGTCAAAGCATTTCTTTTTCTCCACAACCTCGCCAGTGCCTGTTGTTTTTTGACTTTTTAATAATAGCCATTCTGACTGGCGTTAGATGGTATCTTGTGGTTTTGATTTGCATTTCTCTAATGACCAGTGATGTTGAGCTTTTTCTCATGTGATTTTCAGCCACATACATGTCTTCCTTTGAAAAGTGTTCATGTCCTTTGCCCACTTCTTTATGTGGTTGTTTGTTTTTTTCTTGTAAATTTATTTAAGTTCATTATAGATGCTGGATGTTAGACCTTTGTCAGATGCATAGTTTGCAAAAATTTTCTCCCATTCTGTAGGTTGTCTGTTTACTCTGTTGATAGTTTCTTTTGCTATTCCACAATGTTTTGTGCAAGATAAGTGCTTAGCAAATGCTTGTAAAGGAATGCCTGCACCAGGAAAGTCCAATAGCTATGAATAAAGAAAGAAAGGACAAGTTCCAGGGGAGGTGATTTTTTTTTCATTTTCATTTTTTTAGACAGCTTTTAAAGGAATGGAGTAGCATGTTCTTCTGGAGCAGGAGTTACAAATTGGACCTCTAAGGGCCACATTCAGCCTATCCACATGGTTGCAGCACTGACAGAGTGTTTTGAAATTTTAAACTCTGAATACTTGTAGATAACATATGCATGCCACAATAAACTGCATTTCCATC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:lnc-MYOCD-2]] |
Revision as of 12:53, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
lnc-MYOCD-2:4 |
Source |
LNCipedia2.1 |
Same with |
, |
Classification |
intergenic |
Length |
2766 nt |
Genomic location |
chr17+:12453286..12540504 |
Exon number |
4 |
Exons |
12453286..12453394,12487877..12488038,12493758..12494065,12538318..12540504 |
Genome context |
|
Sequence |
000001 AGTTGAAATA ACTCCTTCGT GGAGGCTGGC TACATTTTCA CAACGTCTGG TCCCAAGCTA GATCTTCGGG AAAAGGGATC 000080 000081 AAGGAAATGA CTATTCCTCC AAATAAAATG CAACAAGAAG AATGAAAAAA CGTAGAAGAG AAAGCCTCGT GAAACTGAGA 000160 000161 AGCATCTGCA ACCACAAACT ACAAAATGTA GCTGCTAAAC AAAATGAAAG TTGGATCAAA GTGGTGGCAA ATATCAAGAG 000240 000241 TGAATATACT CCACGGCAGA GTACTGCAAA TGCTGCACAT CTTTCATGGA TTCTGGTCCA CCTCGTCCTC ACGCGGGGAT 000320 000321 GCAGACTGAC AAGCTTCCAC CATGAAGGGT TGTCATTTGC CATAGCAGGG AGAGGAAAAT GGAGCAAATC AGTCACCAGC 000400 000401 TCGTCATACA GAAGAGTGTC CCACGTCATA TCTGCTGATA TGTTATGGCC AAAGTACATG ACTATCTCCA AGGAGCTGAG 000480 000481 AGGTGAAATT CGGACATTTG TCTGGACGGA GTAGAACCAA GAGAGTCGTA AACATCCTGT GGACTACACA CCGTTTAACA 000560 000561 AGATGCAACA GTATTCTGGC TTTGCCTTTC CTGGAGCCCT TAAACAGGCT GAAGTGAAAA GCACCATGAC CTGTCACTAC 000640 000641 AAGACGAGAA GCCTCAGGAG AAGGAAGGAG ATCCCTTTTC ATTGGTTTTG CCGAGTTTCC CGAGCTCCAT CCTCCTACAG 000720 000721 TTAAATCAAC ACTCTTTATC CTTAGACTGC TGATAATCTC ACCAACCGCT TCCTGGTAAG ATCTGTAATG CGTGAGGTCT 000800 000801 TCCTTCTTAG TTGTTTGCAA ACATCAGTGA TTAGGGACAA TTAGGGACTG GTGTGCCTGT CATTCTTCTC CTTTCAGCTG 000880 000881 AGGAGGAAAT CCTCATGCAC CGTTATCGGG AGTGAGACTT CATCTGTCAG CTGCAGTCTC AGGAATCCAC GGGTTCATTC 000960 000961 AGTCGCAACT CTAATCTCAC TAACTTTATC TGTGTTCCTC AAATGCCTTA GACTATTTGC TTCCCACTGA TAGGGAAACC 001040 001041 TGACATCTCA TTTTCTCAGT GTCCAGACAA AGATTCGTAC ATAGCAAGAA ACTAAGATAG GTGTTACAGA ACATGGAGGG 001120 001121 AACCAGGAAA ACCAAATAGA GGACCCCCTT CATGGGGCTT CCAACACGAC AATAGGCAAA AGAGAAGAAA CATACATGTA 001200 001201 AGAGACAAGC AAAACCCAGA ACCATCACTT ATGAAGGATG TCCTCATCAC CCTCTTTTGC TGCCTGTCAA AACCGGTGAG 001280 001281 GGCTCATATG ACACCTTAAT TATGAATTAA TCTTCGTTCC TCCTACACCA GCACTTCCCC TCACCCCAGT CGAAGCCATC 001360 001361 TCTTTATATT TCCATAGCTT AAAATGCTAT TTTTGGTTCT AGATGCTTTG CCTCTAGATT TGGATACTGC ATCCATATTG 001440 001441 TTGTATATTT TTTCCTTTCT ATCTTTTCCA CAATGTTTTT TTTTTTTAAC TTTTAAGTTT AGGGGTCCAA GTGCAGGTTT 001520 001521 GTTACATAGG TAAACTTGTG TCATGGGGGC TTGTTGTACA GATTATTTCA TCACCAAGAT ATTAAGCCTA GTACCCATTA 001600 001601 GTTACGTCTT TCTTCTCCCA CCCTCCACCT TCCAAAAGGC CCCAGTATGT GTTGTACCTC TCTATGTGTC CATGTGTTCT 001680 001681 CATCATTTAG CTCCCACTTA TAAGTGAGAA CGTGCGGTAT CTGGCTTTCT GTCCCTACGT TAGTTTGCTA AGGATGATGG 001760 001761 GCTCCAGCTT CATCCATGTC CCTGCAAAGG ACATGGTCTT GTCCTTTTTT ATGGCTGCAT AGTATTCCAT GGTGTATATG 001840 001841 TACCAATTTT GCTTTATTCA GTCTACCATC GATGGGCATT TAGGTTGATT CAATGTCTTT GCTATTGTGA ATAGTGCTGC 001920 001921 AATGAACATA CACGTGCAGG TGTCTTTATC ATAGAATTAT TTATATT |