Difference between revisions of "NONHSAT136384"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GAGGCCATTGCATGTGATTGGACTGACCTCTTCCTGTGGTGACTAGAAAGTGCTAAAAGAATATTCTTTAGTATTTTCTCTCATACTAAGGGGTTAATATGGAATGTGTTTGAAATTGCAAATTGAATAATTGTCCAGGTTTTTTTTTTATACCTTGCTAAATTAGTTCCTCTTTTAATCTAGTGATAGATACAGTGATGCCAGTGATGACAGCTTTTCAGAGCCAAGGATAGCTGAGTTGGAAATAAGCTGAAATGAATACATGACTGGGAATAATGGGGACTGCCTGTGAGGCCTCTGAAATAATTGAAGGCAAGATGAAGGAACTATCTGAAGAAATCACTACACTCTTAGAGAATCCCTCTGTTCTCCAGCAAACATGGGATGTAAAGCCTCACAGGGAATCTGATAATACATACTTCTGTCAACCAGAACCAGAGGGGTAGTTTTCTTTTCCCTCCAGAGGCAGCCTTTGGTACTTAAAATATCTGTAGCTGATTAAATTTTTCCCAACAACCTCA</dnaseq>| | sequence = <dnaseq>GAGGCCATTGCATGTGATTGGACTGACCTCTTCCTGTGGTGACTAGAAAGTGCTAAAAGAATATTCTTTAGTATTTTCTCTCATACTAAGGGGTTAATATGGAATGTGTTTGAAATTGCAAATTGAATAATTGTCCAGGTTTTTTTTTTATACCTTGCTAAATTAGTTCCTCTTTTAATCTAGTGATAGATACAGTGATGCCAGTGATGACAGCTTTTCAGAGCCAAGGATAGCTGAGTTGGAAATAAGCTGAAATGAATACATGACTGGGAATAATGGGGACTGCCTGTGAGGCCTCTGAAATAATTGAAGGCAAGATGAAGGAACTATCTGAAGAAATCACTACACTCTTAGAGAATCCCTCTGTTCTCCAGCAAACATGGGATGTAAAGCCTCACAGGGAATCTGATAATACATACTTCTGTCAACCAGAACCAGAGGGGTAGTTTTCTTTTCCCTCCAGAGGCAGCCTTTGGTACTTAAAATATCTGTAGCTGATTAAATTTTTCCCAACAACCTCA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG054095]] |
Revision as of 12:56, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT136384 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
521 nt |
| Genomic location |
chrX-:16607672..16609168 |
| Exon number |
2 |
| Exons |
16607672..16607898,16608875..16609168 |
| Genome context |
|
| Sequence |
000001 GAGGCCATTG CATGTGATTG GACTGACCTC TTCCTGTGGT GACTAGAAAG TGCTAAAAGA ATATTCTTTA GTATTTTCTC 000080
000081 TCATACTAAG GGGTTAATAT GGAATGTGTT TGAAATTGCA AATTGAATAA TTGTCCAGGT TTTTTTTTTA TACCTTGCTA 000160 000161 AATTAGTTCC TCTTTTAATC TAGTGATAGA TACAGTGATG CCAGTGATGA CAGCTTTTCA GAGCCAAGGA TAGCTGAGTT 000240 000241 GGAAATAAGC TGAAATGAAT ACATGACTGG GAATAATGGG GACTGCCTGT GAGGCCTCTG AAATAATTGA AGGCAAGATG 000320 000321 AAGGAACTAT CTGAAGAAAT CACTACACTC TTAGAGAATC CCTCTGTTCT CCAGCAAACA TGGGATGTAA AGCCTCACAG 000400 000401 GGAATCTGAT AATACATACT TCTGTCAACC AGAACCAGAG GGGTAGTTTT CTTTTCCCTC CAGAGGCAGC CTTTGGTACT 000480 000481 TAAAATATCT GTAGCTGATT AAATTTTTCC CAACAACCTC A |
Predicted Small Protein
| Name | NONHSAT136384_smProtein_275:445 |
| Length | 57 |
| Molecular weight | 6340.9639 |
| Aromaticity | 0.0535714285714 |
| Instability index | 69.1857142857 |
| Isoelectric point | 4.25738525391 |
| Runs | 7 |
| Runs residual | 0.0282982045277 |
| Runs probability | 0.0476064299593 |
| Amino acid sequence | MGTACEASEIIEGKMKELSEEITTLLENPSVLQQTWDVKPHRESDNTYFCQPEPEG |
| Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLEEEEEELLLLLLLLLEEELLLLLL |
| PRMN | - |
| PiMo | - |
