NONHSAT021823

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT021823

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3284 nt

Genomic location

chr11-:62619410..62623483

Exon number

4

Exons

62619410..62620153,62620283..62621536,62621991..62622688,62622896..62623483

Genome context

Sequence
000001 CTCTACCCAC AACTCCCCGG GGTCGCATGC GGTCAACGTA TGCGCGTGCG CTCGCCGTAG CCCCGCCCCC AAATCCCGTG 000080
000081 GGCCTCTGCG GCATGGTATT TAATCGTCTC CCCGGGGAGA TTCGTTCTCA TTTTTCTACT GCTCGTGGTA AGTGGCTTCG 000160
000161 TGGTCTTTAT AGCTGTTACT CTTTTGTACT TTGTCTTTTT CTTTTATTTT CTTTTGAGCG ATTGTGCGAA CATAGCATAG 000240
000241 CACGCACTAT GCCTTCTGTG TTGTAGCTGC CTGGCCAGGG CGACTGGCGG ATAAGGTCTT GTGCGTGGCC TCGAGGCTTA 000320
000321 AAAGTAGCAG TGGGGCTTTG TGAAGGACAA AATGGCGATG GCGGGCCGTG TAGGTCCCCC TTCCTATGAT GAGGACCTTT 000400
000401 TCACAGACCT GTACTGAGCT CCGTGAGGAT AAATAACTCT GAGGAGATGG GCCCTGCAAG CCTCTTGCTT AGCCGTCTGT 000480
000481 TCAGAAAATA GCGTTTTCGA AATGCCCTGA GTTGACCTAA TGTCTTATTG GGCTCCTGTC TGCAGGATTT ACGCGCACGT 000560
000561 TGGAACCGAA GAGAGCTCTG TTGTTGCAAT GTTCAGCCCA CAAGAGCTTA CTGGTGAAGG AATGGGACAA GACCCATCTT 000640
000641 TATGCAAAGC CAGCGTTACA GTAATGTTCC AGGTAGGTGT ACATGGTTTA TGCTCTTACA GAGGAGACCT TGTAGATAAC 000720
000721 CACTCCATGA TGAACACAAA ATGACAAGCA TATGGCTGAA CTTTCAAGTG ATGTCATCTT ACTACTGAGA AGTGAGAGAG 000800
000801 AGGTCTTAAG GGGTCTTTGA ATGACTATTT TTAGGTACAT AAAATGCTTT CCTCTGTTGT CTACAGCATC TCATAATCTA 000880
000881 TCCTGGGGAA TTCAGCTGCC TCCCAGGGTG AATACAGGTA ATTATCCAAA TTGGTGTATG TCATCTTTGT AAATGTTCAA 000960
000961 GAAAACAAGT GGCCGGCGGA ACAATGTTTT TTGGCGCCTT CCATCTTGTT CCTCTTGAAA TGATTTTCTG GGGAGGGAGA 001040
001041 TCGCAACCCG GTACTACAGT TCTTGTAAGG GTGTGCTGTT ACCCTCATCC ATATATCGAT CACGTTACTG TCAGATGATT 001120
001121 TGAATTGATA AGCTGATGTT CTGTGAGGTA CAAAAGTTAA TAGCATGTTA GAGTTCTGAT GGCAGTTGTT GTTTATGAAT 001200
001201 AAGCTTCATT CCATCCTAAT ACCTTAAAAT AACTAATTTG CTTTCCTTTC CAGGTATTCC TGATGACAGT CTGCCTCTAT 001280
001281 CTTACAGAGC AGCTTGTTGC TATATACCAT TGAAAAGCCT TCAGAGCTGA GAGGTTAGTT GATATTTTTT GTTCCTTACA 001360
001361 GCTTATGCCA CCAAGTAGGC AGTTTCTATG ATGAATCAAA CTAGCTCACT ATGACCGACA GTGAAAATAC ATGAACACCT 001440
001441 GAGAAACTGG AGAACGCAGG GAGTGGGGGG TAACCATGTC TGAGGAATCT TTCACCCACA GCTTTGTTTT TCTCTAGGTA 001520
001521 CTACTAACCA ATAACCTGCT TGGCTCAAAG GTGAGTAATT TCACGGTATT CAATGCACTC AGTATATAGG GTAGGAAAAA 001600
001601 GTGCCTTTTT AGGCCTGTGT TTGTGATGAC TTACATGGAA TCTCGTTCGG CTGATGACTT GCTGTTGAGA CTCTGAAATC 001680
001681 TGATTTTCTG AGAATGATGG GTGGGAACAA CATAATGCGG GATATGAGAA GCACTACTGA CTTGGTCTTC CTCCTTTCAG 001760
001761 GGCCAGCACC TTCTCTCTAA AGCCCAAGAG GAGTTTGAGG TAAATGGCTT TGCAATAGTT ACCATCAATG GCTGCTATAT 001840
001841 AAAATTTTCT GTGATTTTTG TGTGTGATAG CACTGTGGTC TGGGTGAATG TACACAGACA TAACTGGCTT AACCCAAAGT 001920
001921 CTTTGATCTC CTGAACCACC AGTGATGAAT TGCTGCTCAC CAGTGATGAG TTGAATACCG CCCCAGTCTG ATCAATGTGT 002000
002001 GACTGAAAGG TATTTTCTGA GCTGTGAGCC TGCCTTCCAG TGACATGTTC TAAAAATTGC AAGTTATTTG AGGAGGCTTT 002080
002081 ACAGCCAATA GGAAGTTCTT GGGCTAAGTA GTGTTTCCTA TAAAATGTGC CCTGAAACTT CTTTCTGCCA AGCAATAGAT 002160
002161 ACAATTGAGA GATTGTAAAA TGTGACATAG AATGAAAGTC TCTCAAGACT ACATTTTTCT TTCTTGATTT TGCAGGAAAA 002240
002241 CTAGGTGTCT GTGTTCACTC CAGGCTGAAG TTACAGGTGA GTAAACCTAA ATGTAAGGTG GACTATGCTA AAAATTCCCA 002320
002321 ATGAAGAAAC TTTCACATGT CTTACTCTCT GTCCTAGTCC CAGAGCCTGT AAAGGTGAAC CCACTGGGAC TGGCTGGGGG 002400
002401 AGAAGAGGAA GATTTGTTCC AGAAGGAACT GTCTGAGGGA TGATAAAGAT TTCTATACAG AGAAAGGGAG TAATCATCAC 002480
002481 TTGTTGAAAA CATTGGTTTT ATTTTTTCCA GGTCTGAGCA AATAAGGTGT ATAAAAAATG GAATCTGTCT TGGAGGACAT 002560
002561 CAGAAGGTGA ATTTTCCAAG TTCTTGGACA ACCTAGCTGT TGAAAAGCTT TCTGGGTTTG GGGGGTATTT CAGATGTACC 002640
002641 TTAAAGTGTT AGCAGACACA GATTAAGACA CTGGGAGCCA ATGAAACAGC AGTTGAGGGT TTGCTGTGTA TCACATTTCT 002720
002721 GTATTTTATC ACCCCCTTCC TGCAACATTA TTTATCTGGA ATCTACCTGC CCttttgttt tttagataca agggcttggt 002800
002801 tttgttaccc aggctggttt caaggccata gctttaagag atcctctcac cacagatttc caaagtgctg ggattgcagg 002880
002881 tgtgattcat ggcacccagA CTTTGCTGCC TTTCTTACAT GATCCAGGCC CAGAACCCAA ACTCAGGCAC TGTATAGATG 002960
002961 ACCACTTTCG TAAACTACTG ACCTAGCTTG TTGCCAATTG TTGATTGAAC TTCCCATAAC TCCACTTCGT GTCTGTTCCT 003040
003041 CTGTATACAG CCACCTTCTG TTCCCGTCAT GAGCCTTTAG GTCTCCATTT GCATATTGCA AATACTATGT TCCATGTAGG 003120
003121 TAGCTCATTC AGGGCCTTGC TCTTCACTTC AAAAAAGGTT CCCTTGAGGA CTGGCTGTCA ATTTGTGTTG CTGTGTTGGT 003200
003201 TGTTGATGAA AATAATAAAA TGATTGATTA CATAGTCCTG TTTACTTTTT TTGTGTGTAT GTGTCTCTTA GCATCAGTGT 003280
003281 GTAA
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Predicted Small Protein

Name NONHSAT021823_smProtein_26:265
Length 80
Molecular weight 8911.4799
Aromaticity 0.126582278481
Instability index 48.3481012658
Isoelectric point 9.78570556641
Runs 9
Runs residual 0.0263568579851
Runs probability 0.0638089069462
Amino acid sequence MRSTYARALAVAPPPNPVGLCGMVFNRLPGEIRSHFSTARGKWLRGLYSCYSFVLCLFLL
FSFERLCEHSIARTMPSVL
Secondary structure LLLHHHHHHHLLLLLLLLEEEEEELLLLLLHHHHHLLLLLLHHHHHHHHHHHHHHHHHHH
HHHHHHHHHHHHHLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHH
HHHHLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTT
TTTTooooooooooooooo