NONHSAT073971

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT073971

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

797 nt

Genomic location

chr2-:120480698..120486547

Exon number

2

Exons

120480698..120481103,120486157..120486547

Genome context

Sequence
000001 tgcagcctca aactcttgag gtcatgtgat ccctcctgcc tcagcctccc aagtagctgg gactacaggt gcataccacc 000080
000081 acacctggct aatttttatt tttttctttg tacagacaaa aaagaagaaa attgggtctt gttatgttgc ccaggctggt 000160
000161 ctccaactcc tggcctcaag tgatcctccc agcttgtcct tccaaagtgt tgggattata ggtgtgagcc actgtgcctg 000240
000241 gccATGTCTG AATGTTGAAT GTTGACAGCT TCAGTGAATT GACCCCTCTT TCACCTATGG GACTTATGAA GAGAGAATCT 000320
000321 TTCTGGCATT GCATAATCCT TCCCAAGAGT ACTTTAGCTG TGGTAACCCT TCTTGTTATA AAACATGCCA GCAGATCCTG 000400
000401 GCACCCAAGT GACAACCTGC ATTGAAAAGG CGGAACTTGG CTCTCCTGCC CTGCCAGCTG TAAGAGCTTG AAAGCAAAGC 000480
000481 TATGGGGGGA ATGTCTTTCA TTTCCCCCTG GAAGCTGGGA GGACGTTCAG CTTAGCATTG CCAACTGTGT AATGTGGACT 000560
000561 TGCCTCTAAA AGAAGCCTTT TTCCTTGGAT GTCTTTCAGG CCGCAGTATT CCCTTTGGCA CCCCCACCCA CCTGGAACAA 000640
000641 AGCCTGATGT AAAGTCTGGG TGCGACTCAG ACCGGCCTGG GAAAGAATTT ATTTAATAAA TGGTGGAAAG TGGCTTCCTT 000720
000721 GACGTGTCTT CGATGGCTTT TTTATAAAGC ATTTGGTTTG TCTACTCGtc tgtttttgcg ccatctcttt ccacaaa
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Predicted Small Protein

Name NONHSAT073971_smProtein_251:424
Length 58
Molecular weight 6485.5803
Aromaticity 0.0701754385965
Instability index 55.4789473684
Isoelectric point 8.01629638672
Runs 5
Runs residual 0.0662280701754
Runs probability 0.0752340575869
Amino acid sequence MLNVDSFSELTPLSPMGLMKRESFWHCIILPKSTLAVVTLLVIKHASRSWHPSDNLH
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLHHHHHHHHHHHHHHHLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii