ENST00000503577.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000503577.1

Source

Gencode19

Same with

lnc-TARS-1:1,NONHSAT100947

Classification

intergenic

Length

517 nt

Genomic location

chr5+:33229841..33255659

Exon number

4

Exons

33229841..33229964,33244958..33245162,33248648..33248757,33255582..33255659

Genome context

Sequence
000001 TTATTGAGAT ATGTATTTCT GCAGGTTAGG CTGAAGCCTC TGCATGTCCC GATGCCTGAT GGAGATGGAG GAATCCTTTC 000080
000081 TACCCAGACA GAAGTCACAC TATGTAGCCT GTCCTCTTTA GAACTGAATC CGATTGGGAT TTCTTCATGG TCTCCACCCT 000160
000161 GGAAAACCAG CTTGAATTCT TGTATGCGGG CCAGATTCCA AGAGACATCA TAATTAGATC CCAGAAGACT ACATGGCAGC 000240
000241 TGAAGAGGAT GTCCCCTGTG GAATATATGG AGGAAAGGCT GGCCAAAGCA ATGTTCACAT TCATGCAATT ATCCAGTTAA 000320
000321 TTGCACAAGT CAAACCAAGA CTTGTTCTAA AGCCACAATA ACAACGAAAT TGATGCTTTC ATCTCCCAGA AATATGGCTG 000400
000401 TGCTGTGATC CATGAATTTT AAATTAGAAG TAAATCTAGG ACTGAACTAC TAATTTTCCC CATCAGCTGA AGAGTTTTGG 000480
000481 CAATGAACAG CTTGCAGCTG AATCCCCTTC TGGAAAT
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Predicted Small Protein

Name ENST00000503577.1_smProtein_146:319
Length 58
Molecular weight 6786.8942
Aromaticity 0.105263157895
Instability index 59.9543859649
Isoelectric point 8.14019775391
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0304814618541
Amino acid sequence MVSTLENQLEFLYAGQIPRDIIIRSQKTTWQLKRMSPVEYMEERLAKAMFTFMQLSS
Secondary structure LLLHHHHHHHHHHHLLLLHHHEEHHHHHHHHHHHLLLHHHHHHHHHHHHHHHHHLLL
PRMN -
PiMo -