ENST00000589024.1
Revision as of 18:27, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000589024.1 |
Source |
Gencode19 |
Same with |
NONHSAT068868 |
Classification |
intergenic |
Length |
839 nt |
Genomic location |
chr2-:6772393..6774101 |
Exon number |
2 |
Exons |
6772393..6772874,6773745..6774101 |
Genome context |
|
Sequence |
000001 TTCACAAAGA CGTTATTGGT GATTCAATCT TGAGTCATGA AAAGTCAACC TTGAGCCACA AAAAGTCAAC CTTGAGCCAA 000080
000081 GCAGATTGGA GAGTCATACA TGCCATTCCT GGGACCATCA AAAATGGCAG AGGTCACACA AAAAGGCAAA ACTTTTAAGA 000160 000161 GGTGTTTTAA ACGTCGTATG GGCCAAAGAG AAGCTGGATT TCCTATTGGA GTCACCTGTA ACACACGTGT GACGAAATTG 000240 000241 GCCTGTGAGG ACAAGGCAGT GAGCAGAGAG GACAGCAGTC CTTATGAGAT CAAGCTCTAA GGTGAGGTTG CAGGATCTGA 000320 000321 AGGCCAGCTC CCCTGCTTGC TCACTGTATG ACTTTAGGTA TCCTAGACAC ATTTGGAGAA TTCACCTGAG CTACAGGATG 000400 000401 TGGTAAGATT TGGTGAGCAG GTGGTGATTC TTACAGAATC CCTCACACAT TCATGCACAG AACTTCCCCA GCACACTCCC 000480 000481 AGGTAGGACC ACTTCCCTCT TCATTGTGCA AAGATTCACC ACTGGTTCCA GCCTTCTCTG GCACTTTTAA GATATGCATC 000560 000561 AGGTTTTATT CATCTCTGAT TTTCTAGCCT CTGGCAGACT ACCTGGTGTA CCAGAGGCTT TGTAAGTAAT AGTTAAATAA 000640 000641 AGAGAAAACA TTAAAGCAAC ATTGAAGGAA GAGGGTTAAC CAGACTACAG ATTTGAGACC TCTATCTCAG AGGGCCAACA 000720 000721 GTCATGTTGA TGTTTTCATG CTTTCTTGGA TATAAAAGTC ACACTACACT TTCCCTCTCG GTGACCATGT ACAAAGGTTC 000800 000801 ATTTATAATT AATAGACAAA GTCTTTAATA AAGCAAACC |
Predicted Small Protein
Name | ENST00000589024.1_smProtein_452:586 |
Length | 45 |
Molecular weight | 4824.6025 |
Aromaticity | 0.113636363636 |
Instability index | 79.5252272727 |
Isoelectric point | 9.38397216797 |
Runs | 4 |
Runs residual | 0.072192513369 |
Runs probability | 0.0427265500796 |
Amino acid sequence | MHRTSPAHSQVGPLPSSLCKDSPLVPAFSGTFKICIRFYSSLIF |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH |
PiMo | i??????????????????????????????????????????? |