ENST00000546959.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000546959.1

Source

Gencode19

Same with

lnc-POTEM-2:14,NONHSAT035518

Classification

intergenic

Length

413 nt

Genomic location

chr14-:19918476..19919581

Exon number

3

Exons

19918476..19918662,19919138..19919273,19919492..19919581

Genome context

Sequence
000001 TGAAATTTCA TTCTGATTTT CTGGCTGAAG ACTATTCTCT TTGTGTATGT CCACCACAGT TACTTTATCC CTTCATCTGT 000080
000081 GGATGGGCAG TCTCGCTGTA TTGCCCAGGC TGGAGTGCAG TGGCATGATC TCAGCTCACT GCAAGCTCTG CTTCCTGGGT 000160
000161 TCACGCCATT CTCCTGCCTC AGCCTCCTGA GTAGCTGGGA TTACAGGCAC CCGCCACCAC GCCCAGAATG AAACATATAT 000240
000241 GGAAATGTTC TGTGCAATCA AAACAGCAGT GGTAACAGAG GAGATGTAGG CTCTGAGTGT CTCACTGGAG ACTGAAGTCC 000320
000321 ACAGATATGC AACAAAGCCT TTGTCTCCCT GATGTTTTTG CCTCCTGCTG GTCATGTGCT TTCACACATC AAGAGAGGAC 000400
000401 ATTTAACATT TGA
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Predicted Small Protein

Name ENST00000546959.1_smProtein_326:412
Length 29
Molecular weight 3263.7024
Aromaticity 0.142857142857
Instability index 99.3071428571
Isoelectric point 5.30194091797
Runs 7
Runs residual 0.0467806841046
Runs probability 0.0406288641583
Amino acid sequence MQQSLCLPDVFASCWSCAFTHQERTFNI
Secondary structure LLLEELLLHHHHHHHHHLLLHHHHHLLL
PRMN -
PiMo -