ENST00000415255.1
Revision as of 09:54, 16 October 2014 by 192.168.72.52 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000415255.1 |
Source |
Gencode19 |
Same with |
lnc-BMP8A-1:1,NONHSAT002587 |
Classification |
intergenic |
Length |
551 nt |
Genomic location |
chr1+:40030832..40038875 |
Exon number |
4 |
Exons |
40030832..40030891,40036152..40036295,40038127..40038350,40038753..40038875 |
Genome context |
|
Sequence |
000001 GATGGCATTG GCAGGAAGTG CTCTCATTCC AGCCACTCGT TGCATATACT GGTTGGTCAG TGATATCTGT AGATCAACCA 000080
000081 CTGCACACAC AGACATTATA AAGATAACCC ATCCTCTGGC ATACTGAATG ACACAAAGGA CAAAAATTAT TTTGGCTTGT 000160 000161 AATAGCCAAG ACTTATTGTC TCTTCTTCTC CCCATATGGC TTTGATTTGT CCAGGTTCTT GATGAAGACG TTTCCCACAC 000240 000241 CAGATTTTCT CAAAGAGGGA TCCCTCTGAG ACCACATGAT GCGGATTGGC TTTCCCTTAA TCACATCAAA GTTCATGGTG 000320 000321 TCCAAAGCCC GCTCAGCTGT AAGAGAGAAA CACATTTCAA TAAGGAGAGA AAACGTCAGC TCCCACAGGC CAACAGCCTA 000400 000401 AGAACAGATT ACTCCAGGAC TTTTCAAGTG AGGTATTGCA TCAAAGTTAT CAAGTCATTT AGTCTGCAAT CCACCTATGG 000480 000481 AGACAAGTGA CAAAACCTGT AAAGCAAATG ATCTGGAAAA AAAAAAAAAG GTGCTATCCC TGAATTCAGA A |
Predicted Small Protein
Name | ENST00000415255.1_smProtein_275:400 |
Length | 42 |
Molecular weight | 4726.5592 |
Aromaticity | 0.0487804878049 |
Instability index | 56.712195122 |
Isoelectric point | 12.0084838867 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0461427814369 |
Amino acid sequence | MMRIGFPLITSKFMVSKARSAVREKHISIRRENVSSHRPTA |
Secondary structure | LLEELLLLLLLHHHHHHHHHHHHHHLLEEELLLLLLLLLLL |
PRMN | - |
PiMo | - |