ENST00000552826.1

From LncRNAWiki
Revision as of 10:02, 16 October 2014 by 192.168.72.52 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000552826.1

Source

Gencode19

Same with

lnc-FOXG1-6:11,NONHSAT036107

Classification

intergenic

Length

449 nt

Genomic location

chr14+:27106447..27275587

Exon number

4

Exons

27106447..27106539,27200270..27200362,27267120..27267236,27275442..27275587

Genome context

Sequence
000001 CCAAGAACTT GCCATGTGAT CCATCACTAC TAGACTCCCA CAACTGCATT AGATTTGTTC AGGATTTTCA TATAATTTTC 000080
000081 ATAACTGGCT AAGCATTGGA AATGGATGGG GAGAAGGCCT GATGAAAATT ACTGAGGAAG CCTCTTAGCC TATGTGCTCT 000160
000161 GAGAGTAGTG ACACCTAGCA GTCGTTAGAT GAGGGTCTCA TCCTTTTGCC CAGGCTGGAG TACAGTGGTG TGTATGTAGC 000240
000241 ACACTGCAGC CTTCAACTCC TGATCCTCCA ACCTCAGCCT CCACAGTTGC TGGGATTACA AGTTCAAGTT GGTGTGTATC 000320
000321 TGCAAAGGCG ATGGAAAGGA GTTCTTACAT ATGCATATTC TGAAGAAGGA TGTTACCCTT ACTGAAAAAC TTATTCCAAG 000400
000401 ATATGTTTAA TCAATCATGA GAAAAATAAA GAGACATCCT TATGAATGG
[back to top]

Predicted Small Protein

Name ENST00000552826.1_smProtein_350:409
Length 20
Molecular weight 2297.8008
Aromaticity 0.0526315789474
Instability index 60.1631578947
Isoelectric point 9.52288818359
Runs 5
Runs residual 0.0123839009288
Runs probability 0.04984984985
Amino acid sequence MHILKKDVTLTEKLIPRYV
Secondary structure LLEEELLLLHHHHHLLLLL
PRMN -
PiMo -