NONHSAT001640
Revision as of 19:18, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT001640 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
931 nt |
Genomic location |
chr1+:24742302..24746618 |
Exon number |
2 |
Exons |
24742302..24742394,24745781..24746618 |
Genome context |
|
Sequence |
000001 GGGATGAAGG AGGCTGTGCC TCCGGGTTGC ACGAAGAGTC CGAGTCATTT CTCAGAAGGT TTTGATAGGT GGGCCTTAGA 000080
000081 GGAGACGCCG CCGAGCACCG CAAGAACTGG AAAACACACC CCTCTCTGTC TGCCTGGGAG AGCCACGGAA ATTGGCACTT 000160 000161 CTCTGAGTGA AGCTGAGGAG AAGGCTGTAA ATCTGCCAAA ACAGCCTTGA AGTATTCTTT TGTCATGAGG AAGTGACGGC 000240 000241 TGCTGGAGGG AGGTGAACAC CACAAGGAGA GATGGCATCT GGCCTGGGCC CCGCCTAGCA GCAGCTCCAC CTCCTAGGCC 000320 000321 AGGCCCTGTG GGATGCGCCA CTAGACCACC ATGGACGGAT CCCACAGCGC AGCCCTGAAG CTGCAGCAGC TGCCTCCCAC 000400 000401 AAGTAGCTCC AGCGCCGTAA GCGAGGCCTC CTTCTCCTAC AAGGCAAGGG CTTTTTTGGG GTTTGGGAAT TTGTATTTTC 000480 000481 CTAGCAAGGA AGTTACACAG TGCTCTGCAT TGGCTAACAG ATATGTATGG GGTCTGCATG CCTGTCACTG GTAGAAACAG 000560 000561 GCAGGCTCTT CACACAGACA AGGGAATGTG TAAGCAAAAG ACAAGAGATG ggccgggagt ggtggctcac acctgtaatc 000640 000641 ccagcacttt gggaggtggg cgggtcacga ggtcaagaga ttgagaccat tctggccagc atggtgaaac cccgtctcta 000720 000721 ctaaaaacac aaagattggc tgggcgtggt ggtgcccacc tgtagtccca gctactcggg aagctgaggc aggagaatca 000800 000801 cttgaaccaa ggaggtggag gttgcagtga gctgagatgg tgccgctgtt atccagcctg gtgacagagt gagactctgt 000880 000881 ctcaaaagga aaaaaaaaaa aaaaaGAGAT GCTCATTAAA ATACATAAAA A |
Predicted Small Protein
Name | NONHSAT001640_smProtein_350:553 |
Length | 68 |
Molecular weight | 7309.1523 |
Aromaticity | 0.134328358209 |
Instability index | 41.5895522388 |
Isoelectric point | 8.74017333984 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0318161298553 |
Amino acid sequence | MDGSHSAALKLQQLPPTSSSSAVSEASFSYKARAFLGFGNLYFPSKEVTQCSALANRYVW GLHACHW |
Secondary structure | LLLHHHHHHHHHLLLLLLLLHHHHHHHHHHHHHHHHLLLLEELLLLHHHHHHHHHHHHHH HHHHLLL |
PRMN | - |
PiMo | - |