NONHSAT035050

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT035050

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1086 nt

Genomic location

chr13+:106359220..106414120

Exon number

3

Exons

106359220..106359266,106359449..106359978,106413612..106414120

Genome context

Sequence
000001 GCTGCAGTGA ATTCTACAAA GAGGCTATGG GAAAGAAACC TGGAAAGTAC CCTTGGCTGT GTACATTTGA GTAAAGAGAG 000080
000081 CACTATAAAA TCAAAAACCA ATGAAATGGT TTCCAGAACA CAGAACTATT AAGCTTAAGA AAAGGACAGA AGGAACTGAA 000160
000161 GAGAGAGGAA CTGTTTTGGA GCATCACACT TCCACCTCAG AAGAAATAAG GAAGGAAGGA GGAGGGTGTT CCCACGGCTC 000240
000241 TTCAACCAGG CCGGCTCTTC AGCCTACATC CCCATCTCAT CAAGTAAAAG GGATTTTTCA ACTGGACCAA CCAGATGGTT 000320
000321 TAACAGTGCA CTCCCACACC ATTCAACTAC GCAAGGGAGA TACACTTAAC ATATGCAGTC GTATAACACC TACTAACATT 000400
000401 TTCAAACATT AAACCTTTAA AAAAGAGTTC TAAAGAAATA GAAGCTTGAA GTATCATCTC TCAAGTATAT AGACACTACT 000480
000481 TCATGGTGTG GTAATATATG CATATAGAAG CTAGTAAACA CCTCCAGGAG ATGCAAAAGG AATTAGAACT GCCACAAGGT 000560
000561 GCAAGCAAAA CCTTGAGTTC TGTTTTTCCT CTTCTAATCC TTCACCCATC TGAGCTAAAG TCTAGACCTA AGGAGGCTAC 000640
000641 TAATTCAGGG ATCGAGTAAT CTGCCAAGCA AGAGTTTATT CAAGCACAGT TTGAAATAAA GGTTTCAAAT GCATAGCCTG 000720
000721 TCGATACTTT GGAAGGATTC TCATCATAAC GAGTATGCAA TTTGCTATAA AGAAGAATGC CCATtacgga ctaaatgttt 000800
000801 atgtcctcct aaaattcata tgttgaaggc ctaactctca atgtgatgat tatgtggaga tggtgccttt gggaggtaac 000880
000881 tgggcttaga tgtgggcgtg agggtggggc ctcatggtga aatttgtgcc cttgtaagaa aaacacacca caggttttca 000960
000961 ttcttcctct gccacatgag gccacagtaa gaatgtgacc atctgctagc caggaggaaa gtcctcactg gaacccgccc 001040
001041 ataataacac tccagtctgg ggcttttcag cctccagaac catgag
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Predicted Small Protein

Name NONHSAT035050_smProtein_497:658
Length 54
Molecular weight 5909.745
Aromaticity 0.0188679245283
Instability index 78.3735849057
Isoelectric point 6.26666259766
Runs 9
Runs residual 0.00954901058444
Runs probability 0.0426210524251
Amino acid sequence MHIEASKHLQEMQKELELPQGASKTLSSVFPLLILHPSELKSRPKEATNSGIE
Secondary structure LLHHHHHHHHHHHHHHLLLLLLLLHHHHHLLLEEELLLLLLLLLLHHHLLLLL
PRMN -
PiMo -